RNA–Protein interactions for RNA: ENST00000564993.1

PKM-213, Transcript of pyruvate kinase M1/2, humanhuman

TSL 2

Gene PKM, Length 663 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-213ENST00000564993 CCDC87Q9NVE4 849 aa14.82□□□□□ -0.04
PKM-213ENST00000564993 RTCBQ9Y3I0 505 aaKnown RBP14.82□□□□□ -0.04
PKM-213ENST00000564993 COL24A1Q17RW2 1714 aa14.82□□□□□ -0.04
PKM-213ENST00000564993 ERBB4Q15303 1308 aa14.82□□□□□ -0.04
PKM-213ENST00000564993 KCNQ3O43525 872 aa14.81□□□□□ -0.04
PKM-213ENST00000564993 GIGYF1O75420 1035 aaPredicted RBP14.81□□□□□ -0.04
PKM-213ENST00000564993 RPS6KA4O75676 772 aa14.81□□□□□ -0.04
PKM-213ENST00000564993 CRKLP46109 303 aaKnown RBP14.81□□□□□ -0.04
PKM-213ENST00000564993 MIS18AQ9NYP9 233 aa14.81□□□□□ -0.04
PKM-213ENST00000564993 CACNA1FO60840 1977 aa14.81□□□□□ -0.04
PKM-213ENST00000564993 GNPATO15228 680 aa14.8□□□□□ -0.04
PKM-213ENST00000564993 MBIPQ9NS73 344 aa14.8□□□□□ -0.04
PKM-213ENST00000564993 ZNF521Q96K83 1311 aa14.8□□□□□ -0.04
PKM-213ENST00000564993 C4AP0C0L4 1744 aa14.8□□□□□ -0.04
PKM-213ENST00000564993 LRP5O75197 1615 aa14.79□□□□□ -0.04
PKM-213ENST00000564993 IL6STP40189 918 aaPredicted RBP14.79□□□□□ -0.04
PKM-213ENST00000564993 TRAPPC3LQ5T215 181 aa14.79□□□□□ -0.04
PKM-213ENST00000564993 PNPLA7Q6ZV29 1317 aa14.79□□□□□ -0.04
PKM-213ENST00000564993 LAS1LQ9Y4W2 734 aaKnown RBP14.79□□□□□ -0.04
PKM-213ENST00000564993 A0A087WZG4 1122 aa14.78□□□□□ -0.04
PKM-213ENST00000564993 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.78□□□□□ -0.04
PKM-213ENST00000564993 INTS5Q6P9B9 1019 aaKnown RBP14.78□□□□□ -0.04
PKM-213ENST00000564993 NPM2Q86SE8 214 aaKnown RBP14.78□□□□□ -0.04
PKM-213ENST00000564993 MYH16Q9H6N6 1097 aa14.78□□□□□ -0.04
PKM-213ENST00000564993 PSDA5PKW4 1024 aaPredicted RBP14.77□□□□□ -0.05
PKM-213ENST00000564993 RGL2O15211 777 aa14.77□□□□□ -0.05
PKM-213ENST00000564993 MTFR1LQ9H019 292 aa14.77□□□□□ -0.05
PKM-213ENST00000564993 EIF5P55010 431 aaKnown RBP14.76□□□□□ -0.05
PKM-213ENST00000564993 GOLGA2Q08379 1002 aa14.76□□□□□ -0.05
PKM-213ENST00000564993 USP16Q9Y5T5 823 aa14.76□□□□□ -0.05
PKM-213ENST00000564993 COL15A1P39059 1388 aa14.75□□□□□ -0.05
PKM-213ENST00000564993 E9PSI1 815 aa14.75□□□□□ -0.05
PKM-213ENST00000564993 RFC4P35249 363 aa14.75□□□□□ -0.05
PKM-213ENST00000564993 COL23A1Q86Y22 540 aaPredicted RBP14.75□□□□□ -0.05
PKM-213ENST00000564993 ZBTB1Q9Y2K1 713 aa14.75□□□□□ -0.05
PKM-213ENST00000564993 SPON1Q9HCB6 807 aa14.74□□□□□ -0.05
PKM-213ENST00000564993 SALL2Q9Y467 1007 aaPredicted RBP14.74□□□□□ -0.05
PKM-213ENST00000564993 BCORQ6W2J9 1755 aa14.74□□□□□ -0.05
PKM-213ENST00000564993 SCN7AQ01118 1682 aa14.74□□□□□ -0.05
PKM-213ENST00000564993 FANCIQ9NVI1 1328 aa14.73□□□□□ -0.05
PKM-213ENST00000564993 DUSP27Q5VZP5 1158 aa14.73□□□□□ -0.05
PKM-213ENST00000564993 NLGN1Q8N2Q7 840 aa14.73□□□□□ -0.05
PKM-213ENST00000564993 ARHGEF1Q92888 912 aaKnown RBP14.73□□□□□ -0.05
PKM-213ENST00000564993 NARFQ9UHQ1 456 aa14.73□□□□□ -0.05
PKM-213ENST00000564993 PRAMEF22A3QJZ6 481 aa14.72□□□□□ -0.05
PKM-213ENST00000564993 MSH5O43196 834 aa14.72□□□□□ -0.05
PKM-213ENST00000564993 ZPR1O75312 459 aa14.72□□□□□ -0.05
PKM-213ENST00000564993 PHF14O94880 888 aa14.72□□□□□ -0.05
PKM-213ENST00000564993 A1BGP04217 495 aa14.72□□□□□ -0.05
PKM-213ENST00000564993 CANXP27824 592 aaKnown RBP14.72□□□□□ -0.05
PKM-213ENST00000564993 USP42Q9H9J4 1324 aaKnown RBP14.71□□□□□ -0.05
PKM-213ENST00000564993 POLD1P28340 1107 aa14.71□□□□□ -0.05
PKM-213ENST00000564993 HDGFL1Q5TGJ6 251 aa14.71□□□□□ -0.05
PKM-213ENST00000564993 CCDC30Q5VVM6 783 aa14.71□□□□□ -0.05
PKM-213ENST00000564993 ZNF428Q96B54 188 aa14.71□□□□□ -0.05
PKM-213ENST00000564993 DDX21Q9NR30 783 aaKnown RBP eCLIP14.71□□□□□ -0.05
PKM-213ENST00000564993 DBF4Q9UBU7 674 aaPredicted RBP14.71□□□□□ -0.05
PKM-213ENST00000564993 ZBED9Q6R2W3 1325 aa14.7□□□□□ -0.06
PKM-213ENST00000564993 CT47B1P0C2W7 299 aaPredicted RBP14.7□□□□□ -0.06
PKM-213ENST00000564993 HNRNPUQ00839 825 aaKnown RBP eCLIP14.7□□□□□ -0.06
PKM-213ENST00000564993 SLFN5Q08AF3 891 aa14.7□□□□□ -0.06
PKM-213ENST00000564993 TWISTNBQ3B726 338 aaPredicted RBP14.7□□□□□ -0.06
PKM-213ENST00000564993 CLEC4GQ6UXB4 293 aa14.7□□□□□ -0.06
PKM-213ENST00000564993 AMIGO3Q86WK7 504 aa14.7□□□□□ -0.06
PKM-213ENST00000564993 TSR2Q969E8 191 aaKnown RBP14.7□□□□□ -0.06
PKM-213ENST00000564993 NBPF26B4DH59 902 aa14.69□□□□□ -0.06
PKM-213ENST00000564993 EIF2S2P20042 333 aaKnown RBP14.69□□□□□ -0.06
PKM-213ENST00000564993 NBPF10Q6P3W6 841 aaKnown RBP14.69□□□□□ -0.06
PKM-213ENST00000564993 TRMT2AQ8IZ69 625 aaKnown RBP14.69□□□□□ -0.06
PKM-213ENST00000564993 NBPF15Q8N660 670 aa14.69□□□□□ -0.06
PKM-213ENST00000564993 HYPKQ9NX55 129 aa14.69□□□□□ -0.06
PKM-213ENST00000564993 ZNF652Q9Y2D9 606 aa14.69□□□□□ -0.06
PKM-213ENST00000564993 NUP98P52948 1817 aa14.69□□□□□ -0.06
PKM-213ENST00000564993 ERVV-1B6SEH8 477 aa14.68□□□□□ -0.06
PKM-213ENST00000564993 ZBTB7AO95365 584 aa14.68□□□□□ -0.06
PKM-213ENST00000564993 C8orf58Q8NAV2 365 aa14.68□□□□□ -0.06
PKM-213ENST00000564993 STK31Q9BXU1 1019 aa14.68□□□□□ -0.06
PKM-213ENST00000564993 PDGFDQ9GZP0 370 aaPredicted RBP14.68□□□□□ -0.06
PKM-213ENST00000564993 SENP3-EIF4A1A0A087X0R7 540 aa14.67□□□□□ -0.06
PKM-213ENST00000564993 GYS1P13807 737 aa14.67□□□□□ -0.06
PKM-213ENST00000564993 KRT24Q2M2I5 525 aa14.67□□□□□ -0.06
PKM-213ENST00000564993 KIF6Q6ZMV9 814 aa14.67□□□□□ -0.06
PKM-213ENST00000564993 DZIP3Q86Y13 1208 aaKnown RBP14.67□□□□□ -0.06
PKM-213ENST00000564993 SGIP1Q9BQI5 828 aa14.67□□□□□ -0.06
PKM-213ENST00000564993 ANKRD36CQ5JPF3 1778 aa14.66□□□□□ -0.06
PKM-213ENST00000564993 PTGER2P43116 358 aa14.66□□□□□ -0.06
PKM-213ENST00000564993 EXOSC9Q06265 439 aaKnown RBP14.66□□□□□ -0.06
PKM-213ENST00000564993 PDIA6Q15084 440 aa14.66□□□□□ -0.06
PKM-213ENST00000564993 SPINK5Q9NQ38 1064 aaPredicted RBP14.66□□□□□ -0.06
PKM-213ENST00000564993 ZNF330Q9Y3S2 320 aaPredicted RBP14.66□□□□□ -0.06
PKM-213ENST00000564993 VAMP4O75379 141 aa14.65□□□□□ -0.06
PKM-213ENST00000564993 USPL1Q5W0Q7 1092 aa14.65□□□□□ -0.06
PKM-213ENST00000564993 LRP10Q7Z4F1 713 aa14.65□□□□□ -0.06
PKM-213ENST00000564993 TSPYL6Q8N831 410 aa14.65□□□□□ -0.06
PKM-213ENST00000564993 CHPF2Q9P2E5 772 aa14.65□□□□□ -0.06
PKM-213ENST00000564993 MAP3K15Q6ZN16 1313 aa14.65□□□□□ -0.06
PKM-213ENST00000564993 KIF13BQ9NQT8 1826 aa14.64□□□□□ -0.07
PKM-213ENST00000564993 NRXN2Q9P2S2 1712 aa14.64□□□□□ -0.07
PKM-213ENST00000564993 ELL2O00472 640 aaPredicted RBP14.64□□□□□ -0.07
PKM-213ENST00000564993 CAMTA2O94983 1202 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms