RNA–Protein interactions for RNA: ENST00000564386.6

GCSH-203, Transcript of glycine cleavage system protein H, humanhuman

TSL 2

Gene GCSH, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSH-203ENST00000564386 INTS5Q6P9B9 1019 aaKnown RBP28.29■■■□□ 2.12
GCSH-203ENST00000564386 SGIP1Q9BQI5 828 aa28.29■■■□□ 2.12
GCSH-203ENST00000564386 MIS18AQ9NYP9 233 aa28.29■■■□□ 2.12
GCSH-203ENST00000564386 TRIM35Q9UPQ4 493 aa28.29■■■□□ 2.12
GCSH-203ENST00000564386 SNRPA1P09661 255 aaKnown RBP28.26■■■□□ 2.11
GCSH-203ENST00000564386 ARHGEF1Q92888 912 aaKnown RBP28.26■■■□□ 2.11
GCSH-203ENST00000564386 BABAM1Q9NWV8 329 aa28.26■■■□□ 2.11
GCSH-203ENST00000564386 TSPYL4Q9UJ04 414 aa28.26■■■□□ 2.11
GCSH-203ENST00000564386 SOS1Q07889 1333 aaPredicted RBP28.25■■■□□ 2.11
GCSH-203ENST00000564386 RFC4P35249 363 aa28.25■■■□□ 2.11
GCSH-203ENST00000564386 MSL1Q68DK7 614 aa28.25■■■□□ 2.11
GCSH-203ENST00000564386 ZBTB1Q9Y2K1 713 aa28.25■■■□□ 2.11
GCSH-203ENST00000564386 ARXQ96QS3 562 aa28.23■■■□□ 2.11
GCSH-203ENST00000564386 COL15A1P39059 1388 aa28.22■■■□□ 2.11
GCSH-203ENST00000564386 CANXP27824 592 aaKnown RBP28.21■■■□□ 2.11
GCSH-203ENST00000564386 EIF4A1P60842 406 aaKnown RBP28.21■■■□□ 2.11
GCSH-203ENST00000564386 CALD1Q05682 793 aaKnown RBP28.2■■■□□ 2.1
GCSH-203ENST00000564386 FAM9BQ8IZU0 186 aa28.2■■■□□ 2.1
GCSH-203ENST00000564386 PRAMEF22A3QJZ6 481 aa28.19■■■□□ 2.1
GCSH-203ENST00000564386 USP16Q9Y5T5 823 aa28.19■■■□□ 2.1
GCSH-203ENST00000564386 LAS1LQ9Y4W2 734 aaKnown RBP28.18■■■□□ 2.1
GCSH-203ENST00000564386 USP42Q9H9J4 1324 aaKnown RBP28.18■■■□□ 2.1
GCSH-203ENST00000564386 A1BGP04217 495 aa28.17■■■□□ 2.1
GCSH-203ENST00000564386 CHL1O00533 1208 aa28.16■■■□□ 2.1
GCSH-203ENST00000564386 ZPR1O75312 459 aa28.16■■■□□ 2.1
GCSH-203ENST00000564386 GIGYF1O75420 1035 aaPredicted RBP28.16■■■□□ 2.1
GCSH-203ENST00000564386 IL6STP40189 918 aaPredicted RBP28.16■■■□□ 2.1
GCSH-203ENST00000564386 EIF5P55010 431 aaKnown RBP28.16■■■□□ 2.1
GCSH-203ENST00000564386 DIEXFQ68CQ4 756 aaKnown RBP28.16■■■□□ 2.1
GCSH-203ENST00000564386 NLGN1Q8N2Q7 840 aa28.16■■■□□ 2.1
GCSH-203ENST00000564386 SCN7AQ01118 1682 aa28.16■■■□□ 2.1
GCSH-203ENST00000564386 A0A087WZG4 1122 aa28.15■■■□□ 2.1
GCSH-203ENST00000564386 GYS1P13807 737 aa28.15■■■□□ 2.1
GCSH-203ENST00000564386 NPM2Q86SE8 214 aaKnown RBP28.15■■■□□ 2.1
GCSH-203ENST00000564386 SRP68Q9UHB9 627 aaKnown RBP28.15■■■□□ 2.1
GCSH-203ENST00000564386 CCER2I3L3R5 266 aa28.14■■■□□ 2.1
GCSH-203ENST00000564386 CCDC27Q2M243 656 aa28.14■■■□□ 2.1
GCSH-203ENST00000564386 NCBP3Q53F19 620 aaKnown RBP28.14■■■□□ 2.1
GCSH-203ENST00000564386 CFAP44Q96MT7 982 aa28.14■■■□□ 2.1
GCSH-203ENST00000564386 ZNF330Q9Y3S2 320 aaPredicted RBP28.14■■■□□ 2.1
GCSH-203ENST00000564386 FHDC1Q9C0D6 1143 aaPredicted RBP28.13■■■□□ 2.09
GCSH-203ENST00000564386 NARFQ9UHQ1 456 aa28.13■■■□□ 2.09
GCSH-203ENST00000564386 BCORQ6W2J9 1755 aa28.13■■■□□ 2.09
GCSH-203ENST00000564386 IFT57Q9NWB7 429 aa28.12■■■□□ 2.09
GCSH-203ENST00000564386 GNAI1P63096 354 aa28.11■■■□□ 2.09
GCSH-203ENST00000564386 MMP10P09238 476 aa28.1■■■□□ 2.09
GCSH-203ENST00000564386 USPL1Q5W0Q7 1092 aa28.1■■■□□ 2.09
GCSH-203ENST00000564386 KLHL34Q8N239 644 aa28.1■■■□□ 2.09
GCSH-203ENST00000564386 SENP3-EIF4A1A0A087X0R7 540 aa28.09■■■□□ 2.09
GCSH-203ENST00000564386 ZNF853P0CG23 659 aa28.09■■■□□ 2.09
GCSH-203ENST00000564386 PIP4K2AP48426 406 aaPredicted RBP28.08■■■□□ 2.09
GCSH-203ENST00000564386 WWC1Q8IX03 1113 aa28.08■■■□□ 2.09
GCSH-203ENST00000564386 SYT17Q9BSW7 474 aa28.08■■■□□ 2.09
GCSH-203ENST00000564386 FKBP8Q14318 412 aa28.07■■■□□ 2.08
GCSH-203ENST00000564386 MBIPQ9NS73 344 aa28.07■■■□□ 2.08
GCSH-203ENST00000564386 NBPF26B4DH59 902 aa28.06■■■□□ 2.08
GCSH-203ENST00000564386 NBPF10Q6P3W6 841 aaKnown RBP28.06■■■□□ 2.08
GCSH-203ENST00000564386 NGEFQ8N5V2 710 aa28.06■■■□□ 2.08
GCSH-203ENST00000564386 NBPF15Q8N660 670 aa28.06■■■□□ 2.08
GCSH-203ENST00000564386 PARP3Q9Y6F1 533 aa28.06■■■□□ 2.08
GCSH-203ENST00000564386 ERBB4Q15303 1308 aa28.06■■■□□ 2.08
GCSH-203ENST00000564386 KIF13BQ9NQT8 1826 aa28.06■■■□□ 2.08
GCSH-203ENST00000564386 AFDNP55196 1824 aaKnown RBP28.04■■■□□ 2.08
GCSH-203ENST00000564386 DZIP3Q86Y13 1208 aaKnown RBP28.04■■■□□ 2.08
GCSH-203ENST00000564386 TBC1D2BQ9UPU7 963 aa28.04■■■□□ 2.08
GCSH-203ENST00000564386 IL16Q14005 1332 aa28.03■■■□□ 2.08
GCSH-203ENST00000564386 HOXB7P09629 217 aa28.02■■■□□ 2.08
GCSH-203ENST00000564386 EIF2S2P20042 333 aaKnown RBP28.02■■■□□ 2.08
GCSH-203ENST00000564386 KRT24Q2M2I5 525 aa28.02■■■□□ 2.08
GCSH-203ENST00000564386 BCL2L12Q9HB09 334 aa28.02■■■□□ 2.08
GCSH-203ENST00000564386 SALL2Q9Y467 1007 aaPredicted RBP28.02■■■□□ 2.08
GCSH-203ENST00000564386 CD2APQ9Y5K6 639 aa28.02■■■□□ 2.08
GCSH-203ENST00000564386 CAMTA2O94983 1202 aa28■■■□□ 2.07
GCSH-203ENST00000564386 NRXN2Q9P2S2 1712 aa28■■■□□ 2.07
GCSH-203ENST00000564386 TM4SF1P30408 202 aa27.99■■■□□ 2.07
GCSH-203ENST00000564386 NUP98P52948 1817 aa27.99■■■□□ 2.07
GCSH-203ENST00000564386 MYL6BP14649 208 aa27.98■■■□□ 2.07
GCSH-203ENST00000564386 DDR1Q08345 913 aa27.98■■■□□ 2.07
GCSH-203ENST00000564386 NFIXQ14938 502 aa27.98■■■□□ 2.07
GCSH-203ENST00000564386 WDR63Q8IWG1 891 aa27.98■■■□□ 2.07
GCSH-203ENST00000564386 ZNF652Q9Y2D9 606 aa27.98■■■□□ 2.07
GCSH-203ENST00000564386 C10orf71Q711Q0 1435 aa27.98■■■□□ 2.07
GCSH-203ENST00000564386 DCAF8L1A6NGE4 600 aa27.97■■■□□ 2.07
GCSH-203ENST00000564386 POLRMTO00411 1230 aaKnown RBP27.97■■■□□ 2.07
GCSH-203ENST00000564386 DUSP27Q5VZP5 1158 aa27.97■■■□□ 2.07
GCSH-203ENST00000564386 MIER1Q8N108 512 aa27.97■■■□□ 2.07
GCSH-203ENST00000564386 HDGFL1Q5TGJ6 251 aa27.96■■■□□ 2.07
GCSH-203ENST00000564386 NLGN2Q8NFZ4 835 aa27.96■■■□□ 2.07
GCSH-203ENST00000564386 RGL2O15211 777 aa27.95■■■□□ 2.06
GCSH-203ENST00000564386 NECTIN2Q92692 538 aa27.95■■■□□ 2.06
GCSH-203ENST00000564386 KIAA1551Q9HCM1 1747 aa27.95■■■□□ 2.06
GCSH-203ENST00000564386 N4BP2Q86UW6 1770 aaPredicted RBP27.94■■■□□ 2.06
GCSH-203ENST00000564386 TBC1D9BQ66K14 1250 aa27.94■■■□□ 2.06
GCSH-203ENST00000564386 CLEC4GQ6UXB4 293 aa27.94■■■□□ 2.06
GCSH-203ENST00000564386 KIF6Q6ZMV9 814 aa27.94■■■□□ 2.06
GCSH-203ENST00000564386 TSR2Q969E8 191 aaKnown RBP27.94■■■□□ 2.06
GCSH-203ENST00000564386 PDIA6Q15084 440 aa27.93■■■□□ 2.06
GCSH-203ENST00000564386 BICDL1Q6ZP65 573 aa27.93■■■□□ 2.06
GCSH-203ENST00000564386 CARMIL3Q8ND23 1372 aa27.93■■■□□ 2.06
GCSH-203ENST00000564386 DDX21Q9NR30 783 aaKnown RBP eCLIP27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms