RNA–Protein interactions for RNA: ENST00000564204.1

KIFC3-217, Transcript of kinesin family member C3, humanhuman

TSL 4

Gene KIFC3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-217ENST00000564204 TAF7Q15545 349 aaPredicted RBP20.47■□□□□ 0.87
KIFC3-217ENST00000564204 KLHL34Q8N239 644 aa20.47■□□□□ 0.87
KIFC3-217ENST00000564204 SRP68Q9UHB9 627 aaKnown RBP20.47■□□□□ 0.87
KIFC3-217ENST00000564204 GYS1P13807 737 aa20.46■□□□□ 0.87
KIFC3-217ENST00000564204 RFC4P35249 363 aa20.46■□□□□ 0.87
KIFC3-217ENST00000564204 RUNDC1Q96C34 613 aa20.46■□□□□ 0.87
KIFC3-217ENST00000564204 CANXP27824 592 aaKnown RBP20.44■□□□□ 0.86
KIFC3-217ENST00000564204 NEUROD2Q15784 382 aa20.44■□□□□ 0.86
KIFC3-217ENST00000564204 NLGN2Q8NFZ4 835 aa20.44■□□□□ 0.86
KIFC3-217ENST00000564204 USP42Q9H9J4 1324 aaKnown RBP20.44■□□□□ 0.86
KIFC3-217ENST00000564204 ANP32CO43423 234 aa20.43■□□□□ 0.86
KIFC3-217ENST00000564204 STARD3NLO95772 234 aa20.43■□□□□ 0.86
KIFC3-217ENST00000564204 MMP10P09238 476 aa20.43■□□□□ 0.86
KIFC3-217ENST00000564204 USP16Q9Y5T5 823 aa20.43■□□□□ 0.86
KIFC3-217ENST00000564204 COL15A1P39059 1388 aa20.43■□□□□ 0.86
KIFC3-217ENST00000564204 A1BGP04217 495 aa20.42■□□□□ 0.86
KIFC3-217ENST00000564204 TEX13AQ9BXU3 409 aaPredicted RBP20.42■□□□□ 0.86
KIFC3-217ENST00000564204 TRIM35Q9UPQ4 493 aa20.42■□□□□ 0.86
KIFC3-217ENST00000564204 EIF5P55010 431 aaKnown RBP20.41■□□□□ 0.86
KIFC3-217ENST00000564204 FKBP8Q14318 412 aa20.41■□□□□ 0.86
KIFC3-217ENST00000564204 SNRPA1P09661 255 aaKnown RBP20.4■□□□□ 0.86
KIFC3-217ENST00000564204 PIP4K2AP48426 406 aaPredicted RBP20.4■□□□□ 0.86
KIFC3-217ENST00000564204 NLGN1Q8N2Q7 840 aa20.4■□□□□ 0.86
KIFC3-217ENST00000564204 UTRNP46939 3433 aa20.4■□□□□ 0.86
KIFC3-217ENST00000564204 GOLGB1Q14789 3259 aaKnown RBP20.4■□□□□ 0.86
KIFC3-217ENST00000564204 EIF4A1P60842 406 aaKnown RBP20.39■□□□□ 0.85
KIFC3-217ENST00000564204 USPL1Q5W0Q7 1092 aa20.39■□□□□ 0.85
KIFC3-217ENST00000564204 PNISRQ8TF01 805 aaKnown RBP20.39■□□□□ 0.85
KIFC3-217ENST00000564204 LMOD3Q0VAK6 560 aa20.38■□□□□ 0.85
KIFC3-217ENST00000564204 BCL2L12Q9HB09 334 aa20.38■□□□□ 0.85
KIFC3-217ENST00000564204 NARFQ9UHQ1 456 aa20.38■□□□□ 0.85
KIFC3-217ENST00000564204 LAMB4A4D0S4 1761 aa20.37■□□□□ 0.85
KIFC3-217ENST00000564204 APAF1O14727 1248 aa20.37■□□□□ 0.85
KIFC3-217ENST00000564204 DDR1Q08345 913 aa20.37■□□□□ 0.85
KIFC3-217ENST00000564204 MRS2Q9HD23 443 aa20.37■□□□□ 0.85
KIFC3-217ENST00000564204 CD2APQ9Y5K6 639 aa20.37■□□□□ 0.85
KIFC3-217ENST00000564204 ZPR1O75312 459 aa20.36■□□□□ 0.85
KIFC3-217ENST00000564204 ZNF330Q9Y3S2 320 aaPredicted RBP20.36■□□□□ 0.85
KIFC3-217ENST00000564204 NBPF26B4DH59 902 aa20.35■□□□□ 0.85
KIFC3-217ENST00000564204 GIGYF1O75420 1035 aaPredicted RBP20.35■□□□□ 0.85
KIFC3-217ENST00000564204 IL6STP40189 918 aaPredicted RBP20.35■□□□□ 0.85
KIFC3-217ENST00000564204 NBPF10Q6P3W6 841 aaKnown RBP20.35■□□□□ 0.85
KIFC3-217ENST00000564204 NBPF15Q8N660 670 aa20.35■□□□□ 0.85
KIFC3-217ENST00000564204 TSPYL4Q9UJ04 414 aa20.35■□□□□ 0.85
KIFC3-217ENST00000564204 KIF13BQ9NQT8 1826 aa20.34■□□□□ 0.85
KIFC3-217ENST00000564204 TM4SF1P30408 202 aa20.34■□□□□ 0.85
KIFC3-217ENST00000564204 TBC1D2BQ9UPU7 963 aa20.34■□□□□ 0.85
KIFC3-217ENST00000564204 SCN7AQ01118 1682 aa20.34■□□□□ 0.85
KIFC3-217ENST00000564204 KIAA1551Q9HCM1 1747 aa20.33■□□□□ 0.85
KIFC3-217ENST00000564204 SENP3-EIF4A1A0A087X0R7 540 aa20.33■□□□□ 0.85
KIFC3-217ENST00000564204 POLRMTO00411 1230 aaKnown RBP20.32■□□□□ 0.84
KIFC3-217ENST00000564204 NFIXQ14938 502 aa20.32■□□□□ 0.84
KIFC3-217ENST00000564204 PARP3Q9Y6F1 533 aa20.32■□□□□ 0.84
KIFC3-217ENST00000564204 C10orf71Q711Q0 1435 aa20.32■□□□□ 0.84
KIFC3-217ENST00000564204 A0A087WZG4 1122 aa20.31■□□□□ 0.84
KIFC3-217ENST00000564204 CHL1O00533 1208 aa20.31■□□□□ 0.84
KIFC3-217ENST00000564204 BABAM1Q9NWV8 329 aa20.31■□□□□ 0.84
KIFC3-217ENST00000564204 AFDNP55196 1824 aaKnown RBP20.31■□□□□ 0.84
KIFC3-217ENST00000564204 BCORQ6W2J9 1755 aa20.31■□□□□ 0.84
KIFC3-217ENST00000564204 DCAF8L1A6NGE4 600 aa20.3■□□□□ 0.84
KIFC3-217ENST00000564204 CAMTA2O94983 1202 aa20.3■□□□□ 0.84
KIFC3-217ENST00000564204 LAS1LQ9Y4W2 734 aaKnown RBP20.3■□□□□ 0.84
KIFC3-217ENST00000564204 N4BP2Q86UW6 1770 aaPredicted RBP20.29■□□□□ 0.84
KIFC3-217ENST00000564204 YBX3P16989 372 aaKnown RBP eCLIP20.29■□□□□ 0.84
KIFC3-217ENST00000564204 GPR162Q16538 588 aa20.29■□□□□ 0.84
KIFC3-217ENST00000564204 KRT24Q2M2I5 525 aa20.29■□□□□ 0.84
KIFC3-217ENST00000564204 PELP1Q8IZL8 1130 aaKnown RBP20.29■□□□□ 0.84
KIFC3-217ENST00000564204 WWC3Q9ULE0 1092 aa20.29■□□□□ 0.84
KIFC3-217ENST00000564204 PXDNLA1KZ92 1463 aa20.29■□□□□ 0.84
KIFC3-217ENST00000564204 TBC1D9BQ66K14 1250 aa20.28■□□□□ 0.84
KIFC3-217ENST00000564204 DZIP3Q86Y13 1208 aaKnown RBP20.28■□□□□ 0.84
KIFC3-217ENST00000564204 NRXN2Q9P2S2 1712 aa20.27■□□□□ 0.84
KIFC3-217ENST00000564204 BICDL1Q6ZP65 573 aa20.27■□□□□ 0.84
KIFC3-217ENST00000564204 A0A0G2JLW4 131 aa20.25■□□□□ 0.83
KIFC3-217ENST00000564204 ZNF853P0CG23 659 aa20.25■□□□□ 0.83
KIFC3-217ENST00000564204 NPM2Q86SE8 214 aaKnown RBP20.25■□□□□ 0.83
KIFC3-217ENST00000564204 CFAP44Q96MT7 982 aa20.25■□□□□ 0.83
KIFC3-217ENST00000564204 SERPINB2P05120 415 aa20.24■□□□□ 0.83
KIFC3-217ENST00000564204 EIF2S2P20042 333 aaKnown RBP20.24■□□□□ 0.83
KIFC3-217ENST00000564204 NGEFQ8N5V2 710 aa20.24■□□□□ 0.83
KIFC3-217ENST00000564204 MBIPQ9NS73 344 aa20.24■□□□□ 0.83
KIFC3-217ENST00000564204 CARMIL3Q8ND23 1372 aa20.23■□□□□ 0.83
KIFC3-217ENST00000564204 MYL6BP14649 208 aa20.23■□□□□ 0.83
KIFC3-217ENST00000564204 DPEP1P16444 411 aa20.23■□□□□ 0.83
KIFC3-217ENST00000564204 BRCA1P38398 1863 aaKnown RBP20.23■□□□□ 0.83
KIFC3-217ENST00000564204 PDIA6Q15084 440 aa20.23■□□□□ 0.83
KIFC3-217ENST00000564204 PROSER3Q2NL68 480 aa20.23■□□□□ 0.83
KIFC3-217ENST00000564204 CHD4Q14839 1912 aa20.22■□□□□ 0.83
KIFC3-217ENST00000564204 ANXA1P04083 346 aa20.22■□□□□ 0.83
KIFC3-217ENST00000564204 TGFB2P61812 414 aa20.22■□□□□ 0.83
KIFC3-217ENST00000564204 TTLL7Q6ZT98 887 aa20.22■□□□□ 0.83
KIFC3-217ENST00000564204 LRP10Q7Z4F1 713 aa20.22■□□□□ 0.83
KIFC3-217ENST00000564204 NECTIN2Q92692 538 aa20.22■□□□□ 0.83
KIFC3-217ENST00000564204 KCNA3P22001 575 aa20.21■□□□□ 0.83
KIFC3-217ENST00000564204 HLFQ16534 295 aa20.21■□□□□ 0.83
KIFC3-217ENST00000564204 FAM9BQ8IZU0 186 aa20.21■□□□□ 0.83
KIFC3-217ENST00000564204 IFT57Q9NWB7 429 aa20.21■□□□□ 0.83
KIFC3-217ENST00000564204 CHRNA5P30532 468 aa20.2■□□□□ 0.82
KIFC3-217ENST00000564204 WWC1Q8IX03 1113 aa20.2■□□□□ 0.82
KIFC3-217ENST00000564204 ERBB4Q15303 1308 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms