RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 MIS18AQ9NYP9 233 aa22.48■■□□□ 1.19
SPSB3-202ENST00000563668 C4AP0C0L4 1744 aa22.48■■□□□ 1.19
SPSB3-202ENST00000563668 CCDC146Q8IYE0 955 aa22.47■■□□□ 1.19
SPSB3-202ENST00000563668 PRAMEF22A3QJZ6 481 aa22.47■■□□□ 1.19
SPSB3-202ENST00000563668 SOS1Q07889 1333 aaPredicted RBP22.46■■□□□ 1.19
SPSB3-202ENST00000563668 NEFMP07197 916 aa22.46■■□□□ 1.19
SPSB3-202ENST00000563668 MMP10P09238 476 aa22.46■■□□□ 1.19
SPSB3-202ENST00000563668 HNRNPUQ00839 825 aaKnown RBP eCLIP22.45■■□□□ 1.18
SPSB3-202ENST00000563668 FMNL2Q96PY5 1086 aa22.45■■□□□ 1.18
SPSB3-202ENST00000563668 ADAMTS8Q9UP79 889 aa22.45■■□□□ 1.18
SPSB3-202ENST00000563668 MAPK8IP3Q9UPT6 1336 aa22.45■■□□□ 1.18
SPSB3-202ENST00000563668 CANXP27824 592 aaKnown RBP22.44■■□□□ 1.18
SPSB3-202ENST00000563668 TAF7Q15545 349 aaPredicted RBP22.44■■□□□ 1.18
SPSB3-202ENST00000563668 PNNQ9H307 717 aaKnown RBP22.44■■□□□ 1.18
SPSB3-202ENST00000563668 USP42Q9H9J4 1324 aaKnown RBP22.44■■□□□ 1.18
SPSB3-202ENST00000563668 FKBP8Q14318 412 aa22.43■■□□□ 1.18
SPSB3-202ENST00000563668 USP16Q9Y5T5 823 aa22.43■■□□□ 1.18
SPSB3-202ENST00000563668 A1BGP04217 495 aa22.42■■□□□ 1.18
SPSB3-202ENST00000563668 NLGN1Q8N2Q7 840 aa22.42■■□□□ 1.18
SPSB3-202ENST00000563668 RRP7AQ9Y3A4 280 aaKnown RBP22.42■■□□□ 1.18
SPSB3-202ENST00000563668 STARD3NLO95772 234 aa22.41■■□□□ 1.18
SPSB3-202ENST00000563668 RIPK4P57078 832 aa22.41■■□□□ 1.18
SPSB3-202ENST00000563668 TMPOP42166 694 aaKnown RBP22.41■■□□□ 1.18
SPSB3-202ENST00000563668 USPL1Q5W0Q7 1092 aa22.41■■□□□ 1.18
SPSB3-202ENST00000563668 CD2APQ9Y5K6 639 aa22.41■■□□□ 1.18
SPSB3-202ENST00000563668 PIP4K2AP48426 406 aaPredicted RBP22.4■■□□□ 1.18
SPSB3-202ENST00000563668 WDR43Q15061 677 aaKnown RBP eCLIP22.4■■□□□ 1.18
SPSB3-202ENST00000563668 FAM9BQ8IZU0 186 aa22.4■■□□□ 1.18
SPSB3-202ENST00000563668 COL15A1P39059 1388 aa22.4■■□□□ 1.18
SPSB3-202ENST00000563668 EIF5P55010 431 aaKnown RBP22.39■■□□□ 1.17
SPSB3-202ENST00000563668 BCL2L12Q9HB09 334 aa22.39■■□□□ 1.17
SPSB3-202ENST00000563668 DCAF8L1A6NGE4 600 aa22.38■■□□□ 1.17
SPSB3-202ENST00000563668 NEUROD2Q15784 382 aa22.38■■□□□ 1.17
SPSB3-202ENST00000563668 TEX13AQ9BXU3 409 aaPredicted RBP22.38■■□□□ 1.17
SPSB3-202ENST00000563668 DDR1Q08345 913 aa22.37■■□□□ 1.17
SPSB3-202ENST00000563668 PELP1Q8IZL8 1130 aaKnown RBP22.37■■□□□ 1.17
SPSB3-202ENST00000563668 YBX3P16989 372 aaKnown RBP eCLIP22.36■■□□□ 1.17
SPSB3-202ENST00000563668 GPR162Q16538 588 aa22.36■■□□□ 1.17
SPSB3-202ENST00000563668 RUNDC1Q96C34 613 aa22.36■■□□□ 1.17
SPSB3-202ENST00000563668 NARFQ9UHQ1 456 aa22.36■■□□□ 1.17
SPSB3-202ENST00000563668 WWC3Q9ULE0 1092 aa22.36■■□□□ 1.17
SPSB3-202ENST00000563668 ZPR1O75312 459 aa22.36■■□□□ 1.17
SPSB3-202ENST00000563668 SNRPA1P09661 255 aaKnown RBP22.36■■□□□ 1.17
SPSB3-202ENST00000563668 TM4SF1P30408 202 aa22.36■■□□□ 1.17
SPSB3-202ENST00000563668 ZNF330Q9Y3S2 320 aaPredicted RBP22.36■■□□□ 1.17
SPSB3-202ENST00000563668 TRIM35Q9UPQ4 493 aa22.35■■□□□ 1.17
SPSB3-202ENST00000563668 KDM3BQ7LBC6 1761 aa22.34■■□□□ 1.17
SPSB3-202ENST00000563668 TBC1D2BQ9UPU7 963 aa22.34■■□□□ 1.17
SPSB3-202ENST00000563668 PARP3Q9Y6F1 533 aa22.34■■□□□ 1.17
SPSB3-202ENST00000563668 EIF4A1P60842 406 aaKnown RBP22.33■■□□□ 1.17
SPSB3-202ENST00000563668 PNISRQ8TF01 805 aaKnown RBP22.33■■□□□ 1.17
SPSB3-202ENST00000563668 NBPF26B4DH59 902 aa22.32■■□□□ 1.16
SPSB3-202ENST00000563668 IL6STP40189 918 aaPredicted RBP22.32■■□□□ 1.16
SPSB3-202ENST00000563668 NFIXQ14938 502 aa22.32■■□□□ 1.16
SPSB3-202ENST00000563668 NBPF10Q6P3W6 841 aaKnown RBP22.32■■□□□ 1.16
SPSB3-202ENST00000563668 NBPF15Q8N660 670 aa22.32■■□□□ 1.16
SPSB3-202ENST00000563668 ZBED9Q6R2W3 1325 aa22.32■■□□□ 1.16
SPSB3-202ENST00000563668 POLRMTO00411 1230 aaKnown RBP22.31■■□□□ 1.16
SPSB3-202ENST00000563668 C10orf71Q711Q0 1435 aa22.31■■□□□ 1.16
SPSB3-202ENST00000563668 GIGYF1O75420 1035 aaPredicted RBP22.31■■□□□ 1.16
SPSB3-202ENST00000563668 YY1P25490 414 aa22.3■■□□□ 1.16
SPSB3-202ENST00000563668 SUPT16HQ9Y5B9 1047 aaKnown RBP22.3■■□□□ 1.16
SPSB3-202ENST00000563668 KIAA1551Q9HCM1 1747 aa22.3■■□□□ 1.16
SPSB3-202ENST00000563668 KIF13BQ9NQT8 1826 aa22.3■■□□□ 1.16
SPSB3-202ENST00000563668 A0A0G2JLW4 131 aa22.29■■□□□ 1.16
SPSB3-202ENST00000563668 TSPYL4Q9UJ04 414 aa22.29■■□□□ 1.16
SPSB3-202ENST00000563668 PXDNLA1KZ92 1463 aa22.29■■□□□ 1.16
SPSB3-202ENST00000563668 SENP3-EIF4A1A0A087X0R7 540 aa22.28■■□□□ 1.16
SPSB3-202ENST00000563668 APAF1O14727 1248 aa22.28■■□□□ 1.16
SPSB3-202ENST00000563668 BICDL1Q6ZP65 573 aa22.28■■□□□ 1.16
SPSB3-202ENST00000563668 N4BP2Q86UW6 1770 aaPredicted RBP22.27■■□□□ 1.16
SPSB3-202ENST00000563668 A0A087WZG4 1122 aa22.27■■□□□ 1.16
SPSB3-202ENST00000563668 CAMTA2O94983 1202 aa22.27■■□□□ 1.16
SPSB3-202ENST00000563668 TBC1D9BQ66K14 1250 aa22.27■■□□□ 1.16
SPSB3-202ENST00000563668 LMOD3Q0VAK6 560 aa22.26■■□□□ 1.15
SPSB3-202ENST00000563668 DPEP1P16444 411 aa22.26■■□□□ 1.15
SPSB3-202ENST00000563668 DZIP3Q86Y13 1208 aaKnown RBP22.26■■□□□ 1.15
SPSB3-202ENST00000563668 KCNA3P22001 575 aa22.25■■□□□ 1.15
SPSB3-202ENST00000563668 TGFB2P61812 414 aa22.25■■□□□ 1.15
SPSB3-202ENST00000563668 AFDNP55196 1824 aaKnown RBP22.24■■□□□ 1.15
SPSB3-202ENST00000563668 SERPINB2P05120 415 aa22.24■■□□□ 1.15
SPSB3-202ENST00000563668 KRT24Q2M2I5 525 aa22.24■■□□□ 1.15
SPSB3-202ENST00000563668 SCN7AQ01118 1682 aa22.24■■□□□ 1.15
SPSB3-202ENST00000563668 LAMB4A4D0S4 1761 aa22.23■■□□□ 1.15
SPSB3-202ENST00000563668 CHL1O00533 1208 aa22.23■■□□□ 1.15
SPSB3-202ENST00000563668 LAS1LQ9Y4W2 734 aaKnown RBP22.23■■□□□ 1.15
SPSB3-202ENST00000563668 NGEFQ8N5V2 710 aa22.22■■□□□ 1.15
SPSB3-202ENST00000563668 NRXN2Q9P2S2 1712 aa22.22■■□□□ 1.15
SPSB3-202ENST00000563668 CHRNA5P30532 468 aa22.21■■□□□ 1.15
SPSB3-202ENST00000563668 CCDC24Q8N4L8 307 aa22.21■■□□□ 1.15
SPSB3-202ENST00000563668 NPM2Q86SE8 214 aaKnown RBP22.21■■□□□ 1.15
SPSB3-202ENST00000563668 BABAM1Q9NWV8 329 aa22.21■■□□□ 1.15
SPSB3-202ENST00000563668 CARMIL3Q8ND23 1372 aa22.2■■□□□ 1.14
SPSB3-202ENST00000563668 GRIN3BO60391 1043 aa22.2■■□□□ 1.14
SPSB3-202ENST00000563668 MYL6BP14649 208 aa22.2■■□□□ 1.14
SPSB3-202ENST00000563668 BCORQ6W2J9 1755 aa22.2■■□□□ 1.14
SPSB3-202ENST00000563668 CHD4Q14839 1912 aa22.19■■□□□ 1.14
SPSB3-202ENST00000563668 HLFQ16534 295 aa22.19■■□□□ 1.14
SPSB3-202ENST00000563668 EIF2S2P20042 333 aaKnown RBP22.18■■□□□ 1.14
SPSB3-202ENST00000563668 PDIA6Q15084 440 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms