RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 POLMQ9NP87 494 aaPredicted RBP10.2□□□□□ -0.78
LINC00557-201ENST00000563184 SEPT3Q9UH03 358 aa10.2□□□□□ -0.78
LINC00557-201ENST00000563184 PSMA6P60900 246 aaKnown RBP10.19□□□□□ -0.78
LINC00557-201ENST00000563184 SH3PXD2AQ5TCZ1 1133 aa10.19□□□□□ -0.78
LINC00557-201ENST00000563184 NBPF15Q8N660 670 aa10.19□□□□□ -0.78
LINC00557-201ENST00000563184 CHMP7Q8WUX9 453 aaPredicted RBP10.19□□□□□ -0.78
LINC00557-201ENST00000563184 EML1O00423 815 aa10.18□□□□□ -0.78
LINC00557-201ENST00000563184 SERPINB4P48594 390 aa10.18□□□□□ -0.78
LINC00557-201ENST00000563184 TEAD4Q15561 434 aa10.18□□□□□ -0.78
LINC00557-201ENST00000563184 RNF217Q8TC41 542 aa10.18□□□□□ -0.78
LINC00557-201ENST00000563184 SCARF1Q14162 830 aa10.17□□□□□ -0.78
LINC00557-201ENST00000563184 SLC27A3Q5K4L6 730 aa10.17□□□□□ -0.78
LINC00557-201ENST00000563184 CCER1Q8TC90 406 aaPredicted RBP10.17□□□□□ -0.78
LINC00557-201ENST00000563184 COL26A1Q96A83 441 aa10.17□□□□□ -0.78
LINC00557-201ENST00000563184 GZF1Q9H116 711 aaPredicted RBP10.17□□□□□ -0.78
LINC00557-201ENST00000563184 SOS2Q07890 1332 aaPredicted RBP10.16□□□□□ -0.78
LINC00557-201ENST00000563184 SPATA31C2B4DYI2 1134 aa10.16□□□□□ -0.78
LINC00557-201ENST00000563184 SNRPBP14678 240 aaKnown RBP10.16□□□□□ -0.78
LINC00557-201ENST00000563184 NOS2P35228 1153 aa10.16□□□□□ -0.78
LINC00557-201ENST00000563184 TMEM214Q6NUQ4 689 aaKnown RBP10.16□□□□□ -0.78
LINC00557-201ENST00000563184 RHBDD1Q8TEB9 315 aa10.16□□□□□ -0.78
LINC00557-201ENST00000563184 ZFP42Q96MM3 310 aa10.16□□□□□ -0.78
LINC00557-201ENST00000563184 PODXL2Q9NZ53 605 aa10.16□□□□□ -0.78
LINC00557-201ENST00000563184 CABP1Q9NZU7 370 aa10.16□□□□□ -0.78
LINC00557-201ENST00000563184 PARP3Q9Y6F1 533 aa10.16□□□□□ -0.78
LINC00557-201ENST00000563184 PTCD1O75127 700 aaKnown RBP10.15□□□□□ -0.78
LINC00557-201ENST00000563184 HIRAP54198 1017 aaPredicted RBP10.15□□□□□ -0.78
LINC00557-201ENST00000563184 C4orf17Q53FE4 359 aa10.15□□□□□ -0.78
LINC00557-201ENST00000563184 NIFKQ9BYG3 293 aaKnown RBP10.15□□□□□ -0.78
LINC00557-201ENST00000563184 SERTM1A2A2V5 107 aa10.14□□□□□ -0.79
LINC00557-201ENST00000563184 TTLL8A6PVC2 850 aa10.14□□□□□ -0.79
LINC00557-201ENST00000563184 NAA30Q147X3 362 aaPredicted RBP10.14□□□□□ -0.79
LINC00557-201ENST00000563184 L3MBTL2Q969R5 705 aa10.14□□□□□ -0.79
LINC00557-201ENST00000563184 POU4F2Q12837 409 aa10.13□□□□□ -0.79
LINC00557-201ENST00000563184 GNASQ5JWF2 1037 aa10.13□□□□□ -0.79
LINC00557-201ENST00000563184 TREML4Q6UXN2 200 aa10.13□□□□□ -0.79
LINC00557-201ENST00000563184 PRICKLE2Q7Z3G6 844 aa10.13□□□□□ -0.79
LINC00557-201ENST00000563184 SAP130Q9H0E3 1048 aa10.13□□□□□ -0.79
LINC00557-201ENST00000563184 QTRT2Q9H974 415 aaKnown RBP10.13□□□□□ -0.79
LINC00557-201ENST00000563184 DNMT3AQ9Y6K1 912 aaPredicted RBP10.13□□□□□ -0.79
LINC00557-201ENST00000563184 LYSMD3Q7Z3D4 306 aa10.12□□□□□ -0.79
LINC00557-201ENST00000563184 GTF3C2Q8WUA4 911 aaPredicted RBP10.12□□□□□ -0.79
LINC00557-201ENST00000563184 DNMT3LQ9UJW3 386 aa10.12□□□□□ -0.79
LINC00557-201ENST00000563184 ZNF232Q9UNY5 417 aa10.12□□□□□ -0.79
LINC00557-201ENST00000563184 SOWAHDA6NJG2 315 aa10.11□□□□□ -0.79
LINC00557-201ENST00000563184 FIGNL2A6NMB9 653 aa10.11□□□□□ -0.79
LINC00557-201ENST00000563184 GTF2E1P29083 439 aaPredicted RBP10.11□□□□□ -0.79
LINC00557-201ENST00000563184 PHKA2P46019 1235 aa10.11□□□□□ -0.79
LINC00557-201ENST00000563184 PLA2G4AP47712 749 aa10.11□□□□□ -0.79
LINC00557-201ENST00000563184 ZNF211Q13398 564 aaPredicted RBP10.11□□□□□ -0.79
LINC00557-201ENST00000563184 NBPF10Q6P3W6 841 aaKnown RBP10.11□□□□□ -0.79
LINC00557-201ENST00000563184 VTI1AQ96AJ9 217 aa10.11□□□□□ -0.79
LINC00557-201ENST00000563184 MTMR7Q9Y216 660 aa10.11□□□□□ -0.79
LINC00557-201ENST00000563184 CHMP3Q9Y3E7 222 aa10.11□□□□□ -0.79
LINC00557-201ENST00000563184 HCN4Q9Y3Q4 1203 aa10.11□□□□□ -0.79
LINC00557-201ENST00000563184 ABL1P00519 1130 aa10.1□□□□□ -0.79
LINC00557-201ENST00000563184 RHOQP17081 205 aa10.1□□□□□ -0.79
LINC00557-201ENST00000563184 TXLNAP40222 546 aa10.1□□□□□ -0.79
LINC00557-201ENST00000563184 COX20Q5RI15 118 aa10.1□□□□□ -0.79
LINC00557-201ENST00000563184 LCE2AQ5TA79 106 aaPredicted RBP10.1□□□□□ -0.79
LINC00557-201ENST00000563184 SND1Q7KZF4 910 aaKnown RBP eCLIP10.1□□□□□ -0.79
LINC00557-201ENST00000563184 MYO19Q96H55 970 aa10.1□□□□□ -0.79
LINC00557-201ENST00000563184 ANO2Q9NQ90 1003 aa10.1□□□□□ -0.79
LINC00557-201ENST00000563184 EGFL7Q9UHF1 273 aa10.1□□□□□ -0.79
LINC00557-201ENST00000563184 NFX1Q12986 1120 aaKnown RBP10.09□□□□□ -0.79
LINC00557-201ENST00000563184 MTMR3Q13615 1198 aa10.09□□□□□ -0.79
LINC00557-201ENST00000563184 C16orf46Q6P387 395 aa10.09□□□□□ -0.79
LINC00557-201ENST00000563184 NPAS3Q8IXF0 933 aa10.09□□□□□ -0.79
LINC00557-201ENST00000563184 ALDH16A1Q8IZ83 802 aa10.09□□□□□ -0.79
LINC00557-201ENST00000563184 HELQQ8TDG4 1101 aa10.09□□□□□ -0.79
LINC00557-201ENST00000563184 NGLY1Q96IV0 654 aa10.09□□□□□ -0.79
LINC00557-201ENST00000563184 LRFN2Q9ULH4 789 aa10.09□□□□□ -0.79
LINC00557-201ENST00000563184 ICMTO60725 284 aa10.08□□□□□ -0.8
LINC00557-201ENST00000563184 WFS1O76024 890 aa10.08□□□□□ -0.8
LINC00557-201ENST00000563184 ECM1Q16610 540 aa10.08□□□□□ -0.8
LINC00557-201ENST00000563184 WDR44Q5JSH3 913 aa10.08□□□□□ -0.8
LINC00557-201ENST00000563184 C7orf43Q8WVR3 580 aa10.08□□□□□ -0.8
LINC00557-201ENST00000563184 PHACTR1Q9C0D0 580 aa10.08□□□□□ -0.8
LINC00557-201ENST00000563184 TERTO14746 1132 aaKnown RBP10.07□□□□□ -0.8
LINC00557-201ENST00000563184 TNFRSF10BO14763 440 aa10.07□□□□□ -0.8
LINC00557-201ENST00000563184 SOBPA7XYQ1 873 aa10.06□□□□□ -0.8
LINC00557-201ENST00000563184 ATP4AP20648 1035 aa10.06□□□□□ -0.8
LINC00557-201ENST00000563184 C1orf53Q5VUE5 145 aa10.06□□□□□ -0.8
LINC00557-201ENST00000563184 KLRG1Q96E93 195 aa10.06□□□□□ -0.8
LINC00557-201ENST00000563184 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.06□□□□□ -0.8
LINC00557-201ENST00000563184 ZDHHC3Q9NYG2 299 aa10.06□□□□□ -0.8
LINC00557-201ENST00000563184 H3BRB1 525 aa10.05□□□□□ -0.8
LINC00557-201ENST00000563184 RTN1Q16799 776 aa10.05□□□□□ -0.8
LINC00557-201ENST00000563184 FAM26DQ5JW98 314 aa10.05□□□□□ -0.8
LINC00557-201ENST00000563184 TMCO4Q5TGY1 634 aa10.05□□□□□ -0.8
LINC00557-201ENST00000563184 TUT1Q9H6E5 874 aaKnown RBP10.05□□□□□ -0.8
LINC00557-201ENST00000563184 NXF1Q9UBU9 619 aaKnown RBP10.05□□□□□ -0.8
LINC00557-201ENST00000563184 SENP3-EIF4A1A0A087X0R7 540 aa10.04□□□□□ -0.8
LINC00557-201ENST00000563184 NPR3P17342 541 aa10.04□□□□□ -0.8
LINC00557-201ENST00000563184 FKBP4Q02790 459 aaKnown RBP eCLIP10.04□□□□□ -0.8
LINC00557-201ENST00000563184 SF3B2Q13435 895 aaKnown RBP10.04□□□□□ -0.8
LINC00557-201ENST00000563184 AIDAQ96BJ3 306 aa10.04□□□□□ -0.8
LINC00557-201ENST00000563184 TIMMDC1Q9NPL8 285 aa10.04□□□□□ -0.8
LINC00557-201ENST00000563184 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.03□□□□□ -0.8
LINC00557-201ENST00000563184 NBPF1Q3BBV0 1214 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms