RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 TMPOP42166 694 aaKnown RBP25.55■■□□□ 1.68
TMEM249-202ENST00000562477 TAF7Q15545 349 aaPredicted RBP25.55■■□□□ 1.68
TMEM249-202ENST00000562477 C4AP0C0L4 1744 aa25.54■■□□□ 1.68
TMEM249-202ENST00000562477 PRAMEF22A3QJZ6 481 aa25.54■■□□□ 1.68
TMEM249-202ENST00000562477 CANXP27824 592 aaKnown RBP25.54■■□□□ 1.68
TMEM249-202ENST00000562477 RIPK4P57078 832 aa25.54■■□□□ 1.68
TMEM249-202ENST00000562477 STARD3NLO95772 234 aa25.53■■□□□ 1.68
TMEM249-202ENST00000562477 MMP10P09238 476 aa25.53■■□□□ 1.68
TMEM249-202ENST00000562477 USP42Q9H9J4 1324 aaKnown RBP25.52■■□□□ 1.68
TMEM249-202ENST00000562477 NEUROD2Q15784 382 aa25.51■■□□□ 1.67
TMEM249-202ENST00000562477 RUNDC1Q96C34 613 aa25.51■■□□□ 1.67
TMEM249-202ENST00000562477 COL15A1P39059 1388 aa25.51■■□□□ 1.67
TMEM249-202ENST00000562477 A1BGP04217 495 aa25.5■■□□□ 1.67
TMEM249-202ENST00000562477 FKBP8Q14318 412 aa25.5■■□□□ 1.67
TMEM249-202ENST00000562477 USP16Q9Y5T5 823 aa25.5■■□□□ 1.67
TMEM249-202ENST00000562477 NLGN1Q8N2Q7 840 aa25.49■■□□□ 1.67
TMEM249-202ENST00000562477 TEX13AQ9BXU3 409 aaPredicted RBP25.49■■□□□ 1.67
TMEM249-202ENST00000562477 UTRNP46939 3433 aa25.48■■□□□ 1.67
TMEM249-202ENST00000562477 USPL1Q5W0Q7 1092 aa25.48■■□□□ 1.67
TMEM249-202ENST00000562477 ANP32CO43423 234 aa25.47■■□□□ 1.67
TMEM249-202ENST00000562477 SNRPA1P09661 255 aaKnown RBP25.47■■□□□ 1.67
TMEM249-202ENST00000562477 PIP4K2AP48426 406 aaPredicted RBP25.47■■□□□ 1.67
TMEM249-202ENST00000562477 EIF5P55010 431 aaKnown RBP25.47■■□□□ 1.67
TMEM249-202ENST00000562477 GOLGB1Q14789 3259 aaKnown RBP25.47■■□□□ 1.67
TMEM249-202ENST00000562477 ZPR1O75312 459 aa25.46■■□□□ 1.67
TMEM249-202ENST00000562477 PNISRQ8TF01 805 aaKnown RBP25.46■■□□□ 1.67
TMEM249-202ENST00000562477 ZNF330Q9Y3S2 320 aaPredicted RBP25.46■■□□□ 1.67
TMEM249-202ENST00000562477 CD2APQ9Y5K6 639 aa25.46■■□□□ 1.67
TMEM249-202ENST00000562477 NARFQ9UHQ1 456 aa25.45■■□□□ 1.66
TMEM249-202ENST00000562477 TRIM35Q9UPQ4 493 aa25.45■■□□□ 1.66
TMEM249-202ENST00000562477 DCAF8L1A6NGE4 600 aa25.44■■□□□ 1.66
TMEM249-202ENST00000562477 EIF4A1P60842 406 aaKnown RBP25.44■■□□□ 1.66
TMEM249-202ENST00000562477 DDR1Q08345 913 aa25.44■■□□□ 1.66
TMEM249-202ENST00000562477 LMOD3Q0VAK6 560 aa25.44■■□□□ 1.66
TMEM249-202ENST00000562477 BCL2L12Q9HB09 334 aa25.44■■□□□ 1.66
TMEM249-202ENST00000562477 KDM3BQ7LBC6 1761 aa25.44■■□□□ 1.66
TMEM249-202ENST00000562477 PELP1Q8IZL8 1130 aaKnown RBP25.43■■□□□ 1.66
TMEM249-202ENST00000562477 TSPYL4Q9UJ04 414 aa25.42■■□□□ 1.66
TMEM249-202ENST00000562477 APAF1O14727 1248 aa25.41■■□□□ 1.66
TMEM249-202ENST00000562477 IL6STP40189 918 aaPredicted RBP25.41■■□□□ 1.66
TMEM249-202ENST00000562477 GPR162Q16538 588 aa25.41■■□□□ 1.66
TMEM249-202ENST00000562477 TBC1D2BQ9UPU7 963 aa25.41■■□□□ 1.66
TMEM249-202ENST00000562477 PARP3Q9Y6F1 533 aa25.41■■□□□ 1.66
TMEM249-202ENST00000562477 WWC3Q9ULE0 1092 aa25.4■■□□□ 1.66
TMEM249-202ENST00000562477 A0A087WZG4 1122 aa25.39■■□□□ 1.66
TMEM249-202ENST00000562477 NBPF26B4DH59 902 aa25.39■■□□□ 1.66
TMEM249-202ENST00000562477 GIGYF1O75420 1035 aaPredicted RBP25.39■■□□□ 1.66
TMEM249-202ENST00000562477 TM4SF1P30408 202 aa25.39■■□□□ 1.66
TMEM249-202ENST00000562477 NBPF10Q6P3W6 841 aaKnown RBP25.39■■□□□ 1.66
TMEM249-202ENST00000562477 NBPF15Q8N660 670 aa25.39■■□□□ 1.66
TMEM249-202ENST00000562477 MRS2Q9HD23 443 aa25.39■■□□□ 1.66
TMEM249-202ENST00000562477 POLRMTO00411 1230 aaKnown RBP25.38■■□□□ 1.65
TMEM249-202ENST00000562477 YBX3P16989 372 aaKnown RBP eCLIP25.38■■□□□ 1.65
TMEM249-202ENST00000562477 NFIXQ14938 502 aa25.38■■□□□ 1.65
TMEM249-202ENST00000562477 C10orf71Q711Q0 1435 aa25.37■■□□□ 1.65
TMEM249-202ENST00000562477 SENP3-EIF4A1A0A087X0R7 540 aa25.37■■□□□ 1.65
TMEM249-202ENST00000562477 LAS1LQ9Y4W2 734 aaKnown RBP25.36■■□□□ 1.65
TMEM249-202ENST00000562477 CAMTA2O94983 1202 aa25.35■■□□□ 1.65
TMEM249-202ENST00000562477 BICDL1Q6ZP65 573 aa25.34■■□□□ 1.65
TMEM249-202ENST00000562477 DZIP3Q86Y13 1208 aaKnown RBP25.34■■□□□ 1.65
TMEM249-202ENST00000562477 PXDNLA1KZ92 1463 aa25.34■■□□□ 1.65
TMEM249-202ENST00000562477 CHL1O00533 1208 aa25.33■■□□□ 1.65
TMEM249-202ENST00000562477 TBC1D9BQ66K14 1250 aa25.33■■□□□ 1.65
TMEM249-202ENST00000562477 BABAM1Q9NWV8 329 aa25.33■■□□□ 1.65
TMEM249-202ENST00000562477 LAMB4A4D0S4 1761 aa25.32■■□□□ 1.64
TMEM249-202ENST00000562477 A0A0G2JLW4 131 aa25.32■■□□□ 1.64
TMEM249-202ENST00000562477 KRT24Q2M2I5 525 aa25.32■■□□□ 1.64
TMEM249-202ENST00000562477 NPM2Q86SE8 214 aaKnown RBP25.32■■□□□ 1.64
TMEM249-202ENST00000562477 SCN7AQ01118 1682 aa25.32■■□□□ 1.64
TMEM249-202ENST00000562477 KIF13BQ9NQT8 1826 aa25.31■■□□□ 1.64
TMEM249-202ENST00000562477 DPEP1P16444 411 aa25.3■■□□□ 1.64
TMEM249-202ENST00000562477 YY1P25490 414 aa25.3■■□□□ 1.64
TMEM249-202ENST00000562477 NGEFQ8N5V2 710 aa25.3■■□□□ 1.64
TMEM249-202ENST00000562477 KIAA1551Q9HCM1 1747 aa25.29■■□□□ 1.64
TMEM249-202ENST00000562477 SERPINB2P05120 415 aa25.29■■□□□ 1.64
TMEM249-202ENST00000562477 TGFB2P61812 414 aa25.28■■□□□ 1.64
TMEM249-202ENST00000562477 N4BP2Q86UW6 1770 aaPredicted RBP25.27■■□□□ 1.64
TMEM249-202ENST00000562477 MYL6BP14649 208 aa25.27■■□□□ 1.64
TMEM249-202ENST00000562477 EIF2S2P20042 333 aaKnown RBP25.27■■□□□ 1.64
TMEM249-202ENST00000562477 AFDNP55196 1824 aaKnown RBP25.26■■□□□ 1.63
TMEM249-202ENST00000562477 NECTIN2Q92692 538 aa25.26■■□□□ 1.63
TMEM249-202ENST00000562477 BCORQ6W2J9 1755 aa25.26■■□□□ 1.63
TMEM249-202ENST00000562477 CFAP44Q96MT7 982 aa25.25■■□□□ 1.63
TMEM249-202ENST00000562477 MBIPQ9NS73 344 aa25.25■■□□□ 1.63
TMEM249-202ENST00000562477 CARMIL3Q8ND23 1372 aa25.25■■□□□ 1.63
TMEM249-202ENST00000562477 ANXA1P04083 346 aa25.24■■□□□ 1.63
TMEM249-202ENST00000562477 ZNF853P0CG23 659 aa25.24■■□□□ 1.63
TMEM249-202ENST00000562477 KCNA3P22001 575 aa25.24■■□□□ 1.63
TMEM249-202ENST00000562477 CHRNA5P30532 468 aa25.24■■□□□ 1.63
TMEM249-202ENST00000562477 HLFQ16534 295 aa25.24■■□□□ 1.63
TMEM249-202ENST00000562477 PROSER3Q2NL68 480 aa25.24■■□□□ 1.63
TMEM249-202ENST00000562477 TTLL7Q6ZT98 887 aa25.24■■□□□ 1.63
TMEM249-202ENST00000562477 CCDC24Q8N4L8 307 aa25.24■■□□□ 1.63
TMEM249-202ENST00000562477 NRXN2Q9P2S2 1712 aa25.23■■□□□ 1.63
TMEM249-202ENST00000562477 PDIA6Q15084 440 aa25.23■■□□□ 1.63
TMEM249-202ENST00000562477 GRIN3BO60391 1043 aa25.22■■□□□ 1.63
TMEM249-202ENST00000562477 SETDB2Q96T68 719 aa25.22■■□□□ 1.63
TMEM249-202ENST00000562477 LRP10Q7Z4F1 713 aa25.21■■□□□ 1.63
TMEM249-202ENST00000562477 IFT57Q9NWB7 429 aa25.21■■□□□ 1.63
TMEM249-202ENST00000562477 ERBB4Q15303 1308 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms