RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 ZNF853P0CG23 659 aa18.19■□□□□ 0.5
IFT140-205ENST00000561954 HOXB7P09629 217 aa18.18■□□□□ 0.5
IFT140-205ENST00000561954 MBIPQ9NS73 344 aa18.18■□□□□ 0.5
IFT140-205ENST00000561954 SALL2Q9Y467 1007 aaPredicted RBP18.18■□□□□ 0.5
IFT140-205ENST00000561954 SENP3-EIF4A1A0A087X0R7 540 aa18.17■□□□□ 0.5
IFT140-205ENST00000561954 GIGYF1O75420 1035 aaPredicted RBP18.17■□□□□ 0.5
IFT140-205ENST00000561954 MYH16Q9H6N6 1097 aa18.17■□□□□ 0.5
IFT140-205ENST00000561954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.16■□□□□ 0.5
IFT140-205ENST00000561954 RPS6KA4O75676 772 aa18.16■□□□□ 0.5
IFT140-205ENST00000561954 PHF14O94880 888 aa18.16■□□□□ 0.5
IFT140-205ENST00000561954 SLC16A10Q8TF71 515 aa18.16■□□□□ 0.5
IFT140-205ENST00000561954 SOS1Q07889 1333 aaPredicted RBP18.16■□□□□ 0.5
IFT140-205ENST00000561954 ERBB4Q15303 1308 aa18.16■□□□□ 0.5
IFT140-205ENST00000561954 ZNF521Q96K83 1311 aa18.16■□□□□ 0.5
IFT140-205ENST00000561954 COL15A1P39059 1388 aa18.16■□□□□ 0.5
IFT140-205ENST00000561954 INTS5Q6P9B9 1019 aaKnown RBP18.15■□□□□ 0.5
IFT140-205ENST00000561954 NPM2Q86SE8 214 aaKnown RBP18.15■□□□□ 0.5
IFT140-205ENST00000561954 CHMP4AQ9BY43 222 aa18.15■□□□□ 0.5
IFT140-205ENST00000561954 ZBTB1Q9Y2K1 713 aa18.15■□□□□ 0.5
IFT140-205ENST00000561954 LRP5O75197 1615 aa18.14■□□□□ 0.49
IFT140-205ENST00000561954 MSH5O43196 834 aa18.14■□□□□ 0.49
IFT140-205ENST00000561954 C4AP0C0L4 1744 aa18.13■□□□□ 0.49
IFT140-205ENST00000561954 IL6STP40189 918 aaPredicted RBP18.13■□□□□ 0.49
IFT140-205ENST00000561954 TRAPPC3LQ5T215 181 aa18.13■□□□□ 0.49
IFT140-205ENST00000561954 MTFR1LQ9H019 292 aa18.13■□□□□ 0.49
IFT140-205ENST00000561954 FANCIQ9NVI1 1328 aa18.13■□□□□ 0.49
IFT140-205ENST00000561954 A0A087WZG4 1122 aa18.12■□□□□ 0.49
IFT140-205ENST00000561954 PRAMEF22A3QJZ6 481 aa18.12■□□□□ 0.49
IFT140-205ENST00000561954 GOLGA2Q08379 1002 aa18.12■□□□□ 0.49
IFT140-205ENST00000561954 TSR2Q969E8 191 aaKnown RBP18.12■□□□□ 0.49
IFT140-205ENST00000561954 USP16Q9Y5T5 823 aa18.12■□□□□ 0.49
IFT140-205ENST00000561954 MYH14Q7Z406 1995 aaKnown RBP18.11■□□□□ 0.49
IFT140-205ENST00000561954 E9PSI1 815 aa18.11■□□□□ 0.49
IFT140-205ENST00000561954 CANXP27824 592 aaKnown RBP18.11■□□□□ 0.49
IFT140-205ENST00000561954 RFC4P35249 363 aa18.11■□□□□ 0.49
IFT140-205ENST00000561954 HNRNPUQ00839 825 aaKnown RBP eCLIP18.11■□□□□ 0.49
IFT140-205ENST00000561954 COL23A1Q86Y22 540 aaPredicted RBP18.11■□□□□ 0.49
IFT140-205ENST00000561954 SCN7AQ01118 1682 aa18.11■□□□□ 0.49
IFT140-205ENST00000561954 HDGFL1Q5TGJ6 251 aa18.1■□□□□ 0.49
IFT140-205ENST00000561954 AMIGO3Q86WK7 504 aa18.1■□□□□ 0.49
IFT140-205ENST00000561954 USP42Q9H9J4 1324 aaKnown RBP18.09■□□□□ 0.49
IFT140-205ENST00000561954 EIF5P55010 431 aaKnown RBP18.09■□□□□ 0.49
IFT140-205ENST00000561954 DUSP27Q5VZP5 1158 aa18.09■□□□□ 0.49
IFT140-205ENST00000561954 SPON1Q9HCB6 807 aa18.09■□□□□ 0.49
IFT140-205ENST00000561954 ZBTB7AO95365 584 aa18.08■□□□□ 0.48
IFT140-205ENST00000561954 A1BGP04217 495 aa18.08■□□□□ 0.48
IFT140-205ENST00000561954 KRT24Q2M2I5 525 aa18.08■□□□□ 0.48
IFT140-205ENST00000561954 ARHGEF1Q92888 912 aaKnown RBP18.08■□□□□ 0.48
IFT140-205ENST00000561954 PDGFDQ9GZP0 370 aaPredicted RBP18.08■□□□□ 0.48
IFT140-205ENST00000561954 ZNF330Q9Y3S2 320 aaPredicted RBP18.08■□□□□ 0.48
IFT140-205ENST00000561954 ZPR1O75312 459 aa18.07■□□□□ 0.48
IFT140-205ENST00000561954 EIF2S2P20042 333 aaKnown RBP18.07■□□□□ 0.48
IFT140-205ENST00000561954 COL24A1Q17RW2 1714 aa18.06■□□□□ 0.48
IFT140-205ENST00000561954 ZBED9Q6R2W3 1325 aa18.06■□□□□ 0.48
IFT140-205ENST00000561954 POLD1P28340 1107 aa18.06■□□□□ 0.48
IFT140-205ENST00000561954 NARFQ9UHQ1 456 aa18.06■□□□□ 0.48
IFT140-205ENST00000561954 BCORQ6W2J9 1755 aa18.06■□□□□ 0.48
IFT140-205ENST00000561954 RGL2O15211 777 aa18.05■□□□□ 0.48
IFT140-205ENST00000561954 TWISTNBQ3B726 338 aaPredicted RBP18.05■□□□□ 0.48
IFT140-205ENST00000561954 DBF4Q9UBU7 674 aaPredicted RBP18.05■□□□□ 0.48
IFT140-205ENST00000561954 NBPF26B4DH59 902 aa18.04■□□□□ 0.48
IFT140-205ENST00000561954 CCDC30Q5VVM6 783 aa18.04■□□□□ 0.48
IFT140-205ENST00000561954 NBPF10Q6P3W6 841 aaKnown RBP18.04■□□□□ 0.48
IFT140-205ENST00000561954 KIF6Q6ZMV9 814 aa18.04■□□□□ 0.48
IFT140-205ENST00000561954 SMIM5Q71RC9 77 aa18.04■□□□□ 0.48
IFT140-205ENST00000561954 DZIP3Q86Y13 1208 aaKnown RBP18.04■□□□□ 0.48
IFT140-205ENST00000561954 NLGN1Q8N2Q7 840 aa18.04■□□□□ 0.48
IFT140-205ENST00000561954 NBPF15Q8N660 670 aa18.04■□□□□ 0.48
IFT140-205ENST00000561954 C8orf58Q8NAV2 365 aa18.04■□□□□ 0.48
IFT140-205ENST00000561954 SPINK5Q9NQ38 1064 aaPredicted RBP18.04■□□□□ 0.48
IFT140-205ENST00000561954 DDX21Q9NR30 783 aaKnown RBP eCLIP18.04■□□□□ 0.48
IFT140-205ENST00000561954 ZNF652Q9Y2D9 606 aa18.04■□□□□ 0.48
IFT140-205ENST00000561954 GYS1P13807 737 aa18.03■□□□□ 0.48
IFT140-205ENST00000561954 MYL6BP14649 208 aa18.03■□□□□ 0.48
IFT140-205ENST00000561954 PIP4K2AP48426 406 aaPredicted RBP18.03■□□□□ 0.48
IFT140-205ENST00000561954 SLFN5Q08AF3 891 aa18.03■□□□□ 0.48
IFT140-205ENST00000561954 CHPF2Q9P2E5 772 aa18.03■□□□□ 0.48
IFT140-205ENST00000561954 ELL2O00472 640 aaPredicted RBP18.02■□□□□ 0.48
IFT140-205ENST00000561954 USPL1Q5W0Q7 1092 aa18.02■□□□□ 0.48
IFT140-205ENST00000561954 MSL1Q68DK7 614 aa18.02■□□□□ 0.48
IFT140-205ENST00000561954 STK31Q9BXU1 1019 aa18.02■□□□□ 0.48
IFT140-205ENST00000561954 HYPKQ9NX55 129 aa18.02■□□□□ 0.48
IFT140-205ENST00000561954 SRP68Q9UHB9 627 aaKnown RBP18.02■□□□□ 0.48
IFT140-205ENST00000561954 SRCAPQ6ZRS2 3230 aa18.01■□□□□ 0.47
IFT140-205ENST00000561954 EXOSC9Q06265 439 aaKnown RBP18.01■□□□□ 0.47
IFT140-205ENST00000561954 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
IFT140-205ENST00000561954 ARXQ96QS3 562 aa18.01■□□□□ 0.47
IFT140-205ENST00000561954 ATF5Q9Y2D1 282 aaPredicted RBP18.01■□□□□ 0.47
IFT140-205ENST00000561954 CAMTA2O94983 1202 aa18■□□□□ 0.47
IFT140-205ENST00000561954 PTGER2P43116 358 aa18■□□□□ 0.47
IFT140-205ENST00000561954 PDIA6Q15084 440 aa18■□□□□ 0.47
IFT140-205ENST00000561954 TSPYL6Q8N831 410 aa18■□□□□ 0.47
IFT140-205ENST00000561954 SGIP1Q9BQI5 828 aa18■□□□□ 0.47
IFT140-205ENST00000561954 PPP1R1BQ9UD71 204 aaPredicted RBP18■□□□□ 0.47
IFT140-205ENST00000561954 CLEC4GQ6UXB4 293 aa17.99■□□□□ 0.47
IFT140-205ENST00000561954 ZNF428Q96B54 188 aa17.99■□□□□ 0.47
IFT140-205ENST00000561954 TBC1D2BQ9UPU7 963 aa17.99■□□□□ 0.47
IFT140-205ENST00000561954 MAP3K15Q6ZN16 1313 aa17.98■□□□□ 0.47
IFT140-205ENST00000561954 ERVV-1B6SEH8 477 aa17.98■□□□□ 0.47
IFT140-205ENST00000561954 MMP10P09238 476 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms