RNA–Protein interactions for RNA: ENST00000561205.1

SPRED1-202, Transcript of sprouty related EVH1 domain containing 1, humanhuman

TSL 5

Gene SPRED1, Length 1,177 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-202ENST00000561205 APAF1O14727 1248 aa28.15■■■□□ 2.1
SPRED1-202ENST00000561205 MSH5O43196 834 aa28.15■■■□□ 2.1
SPRED1-202ENST00000561205 ARHGEF1Q92888 912 aaKnown RBP28.15■■■□□ 2.1
SPRED1-202ENST00000561205 ZBTB1Q9Y2K1 713 aa28.14■■■□□ 2.1
SPRED1-202ENST00000561205 SNRPA1P09661 255 aaKnown RBP28.13■■■□□ 2.09
SPRED1-202ENST00000561205 NEUROD2Q15784 382 aa28.13■■■□□ 2.09
SPRED1-202ENST00000561205 MIS18AQ9NYP9 233 aa28.13■■■□□ 2.09
SPRED1-202ENST00000561205 NCBP3Q53F19 620 aaKnown RBP28.12■■■□□ 2.09
SPRED1-202ENST00000561205 POLD1P28340 1107 aa28.11■■■□□ 2.09
SPRED1-202ENST00000561205 EIF4A1P60842 406 aaKnown RBP28.11■■■□□ 2.09
SPRED1-202ENST00000561205 ARXQ96QS3 562 aa28.11■■■□□ 2.09
SPRED1-202ENST00000561205 PPP1R1BQ9UD71 204 aaPredicted RBP28.11■■■□□ 2.09
SPRED1-202ENST00000561205 COL15A1P39059 1388 aa28.11■■■□□ 2.09
SPRED1-202ENST00000561205 SCN7AQ01118 1682 aa28.1■■■□□ 2.09
SPRED1-202ENST00000561205 EIF5P55010 431 aaKnown RBP28.09■■■□□ 2.09
SPRED1-202ENST00000561205 USP42Q9H9J4 1324 aaKnown RBP28.09■■■□□ 2.09
SPRED1-202ENST00000561205 PRAMEF22A3QJZ6 481 aa28.08■■■□□ 2.09
SPRED1-202ENST00000561205 CHL1O00533 1208 aa28.08■■■□□ 2.09
SPRED1-202ENST00000561205 GYS1P13807 737 aa28.08■■■□□ 2.09
SPRED1-202ENST00000561205 RFC4P35249 363 aa28.08■■■□□ 2.09
SPRED1-202ENST00000561205 MSL1Q68DK7 614 aa28.08■■■□□ 2.09
SPRED1-202ENST00000561205 USP16Q9Y5T5 823 aa28.08■■■□□ 2.09
SPRED1-202ENST00000561205 GIGYF1O75420 1035 aaPredicted RBP28.07■■■□□ 2.08
SPRED1-202ENST00000561205 TSPYL4Q9UJ04 414 aa28.07■■■□□ 2.08
SPRED1-202ENST00000561205 BCORQ6W2J9 1755 aa28.06■■■□□ 2.08
SPRED1-202ENST00000561205 IL6STP40189 918 aaPredicted RBP28.06■■■□□ 2.08
SPRED1-202ENST00000561205 CCDC27Q2M243 656 aa28.06■■■□□ 2.08
SPRED1-202ENST00000561205 NLGN1Q8N2Q7 840 aa28.05■■■□□ 2.08
SPRED1-202ENST00000561205 KIF13BQ9NQT8 1826 aa28.05■■■□□ 2.08
SPRED1-202ENST00000561205 ZNF853P0CG23 659 aa28.04■■■□□ 2.08
SPRED1-202ENST00000561205 FHDC1Q9C0D6 1143 aaPredicted RBP28.04■■■□□ 2.08
SPRED1-202ENST00000561205 A1BGP04217 495 aa28.03■■■□□ 2.08
SPRED1-202ENST00000561205 CANXP27824 592 aaKnown RBP28.03■■■□□ 2.08
SPRED1-202ENST00000561205 CFAP44Q96MT7 982 aa28.03■■■□□ 2.08
SPRED1-202ENST00000561205 NARFQ9UHQ1 456 aa28.03■■■□□ 2.08
SPRED1-202ENST00000561205 SRP68Q9UHB9 627 aaKnown RBP28.02■■■□□ 2.08
SPRED1-202ENST00000561205 CALD1Q05682 793 aaKnown RBP28.01■■■□□ 2.07
SPRED1-202ENST00000561205 SYT17Q9BSW7 474 aa28.01■■■□□ 2.07
SPRED1-202ENST00000561205 CCER2I3L3R5 266 aa28■■■□□ 2.07
SPRED1-202ENST00000561205 NRXN2Q9P2S2 1712 aa27.99■■■□□ 2.07
SPRED1-202ENST00000561205 A0A087WZG4 1122 aa27.99■■■□□ 2.07
SPRED1-202ENST00000561205 NBPF26B4DH59 902 aa27.99■■■□□ 2.07
SPRED1-202ENST00000561205 NBPF10Q6P3W6 841 aaKnown RBP27.99■■■□□ 2.07
SPRED1-202ENST00000561205 NBPF15Q8N660 670 aa27.99■■■□□ 2.07
SPRED1-202ENST00000561205 IFT57Q9NWB7 429 aa27.99■■■□□ 2.07
SPRED1-202ENST00000561205 BCL2L12Q9HB09 334 aa27.98■■■□□ 2.07
SPRED1-202ENST00000561205 ERBB4Q15303 1308 aa27.97■■■□□ 2.07
SPRED1-202ENST00000561205 ZPR1O75312 459 aa27.97■■■□□ 2.07
SPRED1-202ENST00000561205 MMP10P09238 476 aa27.97■■■□□ 2.07
SPRED1-202ENST00000561205 FKBP8Q14318 412 aa27.97■■■□□ 2.07
SPRED1-202ENST00000561205 KIAA1551Q9HCM1 1747 aa27.96■■■□□ 2.07
SPRED1-202ENST00000561205 USPL1Q5W0Q7 1092 aa27.96■■■□□ 2.07
SPRED1-202ENST00000561205 WWC1Q8IX03 1113 aa27.96■■■□□ 2.07
SPRED1-202ENST00000561205 AFDNP55196 1824 aaKnown RBP27.96■■■□□ 2.07
SPRED1-202ENST00000561205 GNAI1P63096 354 aa27.95■■■□□ 2.06
SPRED1-202ENST00000561205 FAM9BQ8IZU0 186 aa27.95■■■□□ 2.06
SPRED1-202ENST00000561205 CD2APQ9Y5K6 639 aa27.95■■■□□ 2.06
SPRED1-202ENST00000561205 RGL2O15211 777 aa27.94■■■□□ 2.06
SPRED1-202ENST00000561205 TM4SF1P30408 202 aa27.94■■■□□ 2.06
SPRED1-202ENST00000561205 NGEFQ8N5V2 710 aa27.94■■■□□ 2.06
SPRED1-202ENST00000561205 MBIPQ9NS73 344 aa27.94■■■□□ 2.06
SPRED1-202ENST00000561205 IL16Q14005 1332 aa27.93■■■□□ 2.06
SPRED1-202ENST00000561205 C10orf71Q711Q0 1435 aa27.93■■■□□ 2.06
SPRED1-202ENST00000561205 HOXB7P09629 217 aa27.93■■■□□ 2.06
SPRED1-202ENST00000561205 CAMTA2O94983 1202 aa27.92■■■□□ 2.06
SPRED1-202ENST00000561205 PIP4K2AP48426 406 aaPredicted RBP27.92■■■□□ 2.06
SPRED1-202ENST00000561205 DIEXFQ68CQ4 756 aaKnown RBP27.92■■■□□ 2.06
SPRED1-202ENST00000561205 DDR1Q08345 913 aa27.91■■■□□ 2.06
SPRED1-202ENST00000561205 LAS1LQ9Y4W2 734 aaKnown RBP27.91■■■□□ 2.06
SPRED1-202ENST00000561205 KRT24Q2M2I5 525 aa27.9■■■□□ 2.06
SPRED1-202ENST00000561205 LRP10Q7Z4F1 713 aa27.9■■■□□ 2.06
SPRED1-202ENST00000561205 TBC1D2BQ9UPU7 963 aa27.9■■■□□ 2.06
SPRED1-202ENST00000561205 POLRMTO00411 1230 aaKnown RBP27.89■■■□□ 2.06
SPRED1-202ENST00000561205 DZIP3Q86Y13 1208 aaKnown RBP27.89■■■□□ 2.06
SPRED1-202ENST00000561205 NUP98P52948 1817 aa27.88■■■□□ 2.05
SPRED1-202ENST00000561205 NFIXQ14938 502 aa27.88■■■□□ 2.05
SPRED1-202ENST00000561205 PDIA6Q15084 440 aa27.88■■■□□ 2.05
SPRED1-202ENST00000561205 PARP3Q9Y6F1 533 aa27.88■■■□□ 2.05
SPRED1-202ENST00000561205 NPM2Q86SE8 214 aaKnown RBP27.87■■■□□ 2.05
SPRED1-202ENST00000561205 NLGN2Q8NFZ4 835 aa27.87■■■□□ 2.05
SPRED1-202ENST00000561205 ZNF330Q9Y3S2 320 aaPredicted RBP27.87■■■□□ 2.05
SPRED1-202ENST00000561205 CLEC4GQ6UXB4 293 aa27.86■■■□□ 2.05
SPRED1-202ENST00000561205 WDR63Q8IWG1 891 aa27.86■■■□□ 2.05
SPRED1-202ENST00000561205 BRCA1P38398 1863 aaKnown RBP27.86■■■□□ 2.05
SPRED1-202ENST00000561205 GOLGB1Q14789 3259 aaKnown RBP27.84■■■□□ 2.05
SPRED1-202ENST00000561205 PXDNLA1KZ92 1463 aa27.83■■■□□ 2.05
SPRED1-202ENST00000561205 SENP3-EIF4A1A0A087X0R7 540 aa27.83■■■□□ 2.05
SPRED1-202ENST00000561205 KLHL34Q8N239 644 aa27.83■■■□□ 2.05
SPRED1-202ENST00000561205 ZNF521Q96K83 1311 aa27.83■■■□□ 2.05
SPRED1-202ENST00000561205 N4BP2Q86UW6 1770 aaPredicted RBP27.83■■■□□ 2.05
SPRED1-202ENST00000561205 DUSP27Q5VZP5 1158 aa27.82■■■□□ 2.04
SPRED1-202ENST00000561205 TBC1D9BQ66K14 1250 aa27.82■■■□□ 2.04
SPRED1-202ENST00000561205 ERVV-1B6SEH8 477 aa27.81■■■□□ 2.04
SPRED1-202ENST00000561205 EIF2S2P20042 333 aaKnown RBP27.81■■■□□ 2.04
SPRED1-202ENST00000561205 DDX21Q9NR30 783 aaKnown RBP eCLIP27.81■■■□□ 2.04
SPRED1-202ENST00000561205 CARMIL3Q8ND23 1372 aa27.81■■■□□ 2.04
SPRED1-202ENST00000561205 ANKRD31Q8N7Z5 1873 aa27.81■■■□□ 2.04
SPRED1-202ENST00000561205 PROSER3Q2NL68 480 aa27.8■■■□□ 2.04
SPRED1-202ENST00000561205 ZNF652Q9Y2D9 606 aa27.8■■■□□ 2.04
SPRED1-202ENST00000561205 ANKRD36CQ5JPF3 1778 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms