RNA–Protein interactions for RNA: ENST00000561106.1

SEMA6D-216, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-216ENST00000561106 PRAMEF22A3QJZ6 481 aa19■□□□□ 0.63
SEMA6D-216ENST00000561106 ZBTB1Q9Y2K1 713 aa19■□□□□ 0.63
SEMA6D-216ENST00000561106 USP16Q9Y5T5 823 aa19■□□□□ 0.63
SEMA6D-216ENST00000561106 STARD3NLO95772 234 aa18.99■□□□□ 0.63
SEMA6D-216ENST00000561106 SYT17Q9BSW7 474 aa18.99■□□□□ 0.63
SEMA6D-216ENST00000561106 TEX13AQ9BXU3 409 aaPredicted RBP18.99■□□□□ 0.63
SEMA6D-216ENST00000561106 SOS1Q07889 1333 aaPredicted RBP18.99■□□□□ 0.63
SEMA6D-216ENST00000561106 RFC4P35249 363 aa18.98■□□□□ 0.63
SEMA6D-216ENST00000561106 MRS2Q9HD23 443 aa18.98■□□□□ 0.63
SEMA6D-216ENST00000561106 SRP68Q9UHB9 627 aaKnown RBP18.98■□□□□ 0.63
SEMA6D-216ENST00000561106 APAF1O14727 1248 aa18.97■□□□□ 0.63
SEMA6D-216ENST00000561106 A1BGP04217 495 aa18.97■□□□□ 0.63
SEMA6D-216ENST00000561106 CANXP27824 592 aaKnown RBP18.97■□□□□ 0.63
SEMA6D-216ENST00000561106 SNRPA1P09661 255 aaKnown RBP18.96■□□□□ 0.63
SEMA6D-216ENST00000561106 GYS1P13807 737 aa18.96■□□□□ 0.63
SEMA6D-216ENST00000561106 LMOD3Q0VAK6 560 aa18.96■□□□□ 0.63
SEMA6D-216ENST00000561106 C4AP0C0L4 1744 aa18.96■□□□□ 0.63
SEMA6D-216ENST00000561106 EIF5P55010 431 aaKnown RBP18.95■□□□□ 0.62
SEMA6D-216ENST00000561106 EIF4A1P60842 406 aaKnown RBP18.95■□□□□ 0.62
SEMA6D-216ENST00000561106 NLGN1Q8N2Q7 840 aa18.95■□□□□ 0.62
SEMA6D-216ENST00000561106 KDM3BQ7LBC6 1761 aa18.94■□□□□ 0.62
SEMA6D-216ENST00000561106 USP42Q9H9J4 1324 aaKnown RBP18.94■□□□□ 0.62
SEMA6D-216ENST00000561106 GIGYF1O75420 1035 aaPredicted RBP18.93■□□□□ 0.62
SEMA6D-216ENST00000561106 MMP10P09238 476 aa18.93■□□□□ 0.62
SEMA6D-216ENST00000561106 KLHL34Q8N239 644 aa18.93■□□□□ 0.62
SEMA6D-216ENST00000561106 SENP3-EIF4A1A0A087X0R7 540 aa18.92■□□□□ 0.62
SEMA6D-216ENST00000561106 PIP4K2AP48426 406 aaPredicted RBP18.92■□□□□ 0.62
SEMA6D-216ENST00000561106 FKBP8Q14318 412 aa18.92■□□□□ 0.62
SEMA6D-216ENST00000561106 NARFQ9UHQ1 456 aa18.92■□□□□ 0.62
SEMA6D-216ENST00000561106 TSPYL4Q9UJ04 414 aa18.92■□□□□ 0.62
SEMA6D-216ENST00000561106 COL15A1P39059 1388 aa18.92■□□□□ 0.62
SEMA6D-216ENST00000561106 NBPF26B4DH59 902 aa18.91■□□□□ 0.62
SEMA6D-216ENST00000561106 CHL1O00533 1208 aa18.91■□□□□ 0.62
SEMA6D-216ENST00000561106 USPL1Q5W0Q7 1092 aa18.91■□□□□ 0.62
SEMA6D-216ENST00000561106 NBPF10Q6P3W6 841 aaKnown RBP18.91■□□□□ 0.62
SEMA6D-216ENST00000561106 NBPF15Q8N660 670 aa18.91■□□□□ 0.62
SEMA6D-216ENST00000561106 BCL2L12Q9HB09 334 aa18.91■□□□□ 0.62
SEMA6D-216ENST00000561106 BABAM1Q9NWV8 329 aa18.91■□□□□ 0.62
SEMA6D-216ENST00000561106 ZPR1O75312 459 aa18.9■□□□□ 0.62
SEMA6D-216ENST00000561106 IL6STP40189 918 aaPredicted RBP18.9■□□□□ 0.62
SEMA6D-216ENST00000561106 NLGN2Q8NFZ4 835 aa18.9■□□□□ 0.62
SEMA6D-216ENST00000561106 TM4SF1P30408 202 aa18.89■□□□□ 0.61
SEMA6D-216ENST00000561106 TBC1D2BQ9UPU7 963 aa18.89■□□□□ 0.61
SEMA6D-216ENST00000561106 ZNF330Q9Y3S2 320 aaPredicted RBP18.88■□□□□ 0.61
SEMA6D-216ENST00000561106 LAS1LQ9Y4W2 734 aaKnown RBP18.88■□□□□ 0.61
SEMA6D-216ENST00000561106 CD2APQ9Y5K6 639 aa18.88■□□□□ 0.61
SEMA6D-216ENST00000561106 A0A087WZG4 1122 aa18.87■□□□□ 0.61
SEMA6D-216ENST00000561106 DDR1Q08345 913 aa18.87■□□□□ 0.61
SEMA6D-216ENST00000561106 ZNF853P0CG23 659 aa18.86■□□□□ 0.61
SEMA6D-216ENST00000561106 KRT24Q2M2I5 525 aa18.86■□□□□ 0.61
SEMA6D-216ENST00000561106 NFIXQ14938 502 aa18.85■□□□□ 0.61
SEMA6D-216ENST00000561106 FAM9BQ8IZU0 186 aa18.85■□□□□ 0.61
SEMA6D-216ENST00000561106 CFAP44Q96MT7 982 aa18.85■□□□□ 0.61
SEMA6D-216ENST00000561106 PARP3Q9Y6F1 533 aa18.85■□□□□ 0.61
SEMA6D-216ENST00000561106 CAMTA2O94983 1202 aa18.84■□□□□ 0.61
SEMA6D-216ENST00000561106 POLRMTO00411 1230 aaKnown RBP18.83■□□□□ 0.6
SEMA6D-216ENST00000561106 DZIP3Q86Y13 1208 aaKnown RBP18.83■□□□□ 0.6
SEMA6D-216ENST00000561106 MBIPQ9NS73 344 aa18.83■□□□□ 0.6
SEMA6D-216ENST00000561106 LAMB4A4D0S4 1761 aa18.83■□□□□ 0.6
SEMA6D-216ENST00000561106 EIF2S2P20042 333 aaKnown RBP18.82■□□□□ 0.6
SEMA6D-216ENST00000561106 PDIA6Q15084 440 aa18.81■□□□□ 0.6
SEMA6D-216ENST00000561106 CCDC27Q2M243 656 aa18.81■□□□□ 0.6
SEMA6D-216ENST00000561106 TBC1D9BQ66K14 1250 aa18.81■□□□□ 0.6
SEMA6D-216ENST00000561106 BICDL1Q6ZP65 573 aa18.81■□□□□ 0.6
SEMA6D-216ENST00000561106 NPM2Q86SE8 214 aaKnown RBP18.81■□□□□ 0.6
SEMA6D-216ENST00000561106 WWC1Q8IX03 1113 aa18.81■□□□□ 0.6
SEMA6D-216ENST00000561106 NGEFQ8N5V2 710 aa18.81■□□□□ 0.6
SEMA6D-216ENST00000561106 KIF13BQ9NQT8 1826 aa18.8■□□□□ 0.6
SEMA6D-216ENST00000561106 MYL6BP14649 208 aa18.8■□□□□ 0.6
SEMA6D-216ENST00000561106 IFT57Q9NWB7 429 aa18.8■□□□□ 0.6
SEMA6D-216ENST00000561106 AFDNP55196 1824 aaKnown RBP18.79■□□□□ 0.6
SEMA6D-216ENST00000561106 DCAF8L1A6NGE4 600 aa18.79■□□□□ 0.6
SEMA6D-216ENST00000561106 SERPINB2P05120 415 aa18.79■□□□□ 0.6
SEMA6D-216ENST00000561106 GNAI1P63096 354 aa18.79■□□□□ 0.6
SEMA6D-216ENST00000561106 CALD1Q05682 793 aaKnown RBP18.79■□□□□ 0.6
SEMA6D-216ENST00000561106 NCBP3Q53F19 620 aaKnown RBP18.79■□□□□ 0.6
SEMA6D-216ENST00000561106 LRP10Q7Z4F1 713 aa18.79■□□□□ 0.6
SEMA6D-216ENST00000561106 NECTIN2Q92692 538 aa18.79■□□□□ 0.6
SEMA6D-216ENST00000561106 SALL2Q9Y467 1007 aaPredicted RBP18.79■□□□□ 0.6
SEMA6D-216ENST00000561106 C10orf71Q711Q0 1435 aa18.78■□□□□ 0.6
SEMA6D-216ENST00000561106 ANXA1P04083 346 aa18.78■□□□□ 0.6
SEMA6D-216ENST00000561106 GPR162Q16538 588 aa18.78■□□□□ 0.6
SEMA6D-216ENST00000561106 PROSER3Q2NL68 480 aa18.78■□□□□ 0.6
SEMA6D-216ENST00000561106 TTLL7Q6ZT98 887 aa18.78■□□□□ 0.6
SEMA6D-216ENST00000561106 A0A0G2JLW4 131 aa18.77■□□□□ 0.6
SEMA6D-216ENST00000561106 YBX3P16989 372 aaKnown RBP eCLIP18.77■□□□□ 0.6
SEMA6D-216ENST00000561106 HLFQ16534 295 aa18.77■□□□□ 0.6
SEMA6D-216ENST00000561106 DUSP27Q5VZP5 1158 aa18.77■□□□□ 0.6
SEMA6D-216ENST00000561106 CLEC4GQ6UXB4 293 aa18.77■□□□□ 0.6
SEMA6D-216ENST00000561106 ERBB4Q15303 1308 aa18.76■□□□□ 0.59
SEMA6D-216ENST00000561106 SCN7AQ01118 1682 aa18.76■□□□□ 0.59
SEMA6D-216ENST00000561106 TGFB2P61812 414 aa18.76■□□□□ 0.59
SEMA6D-216ENST00000561106 PELP1Q8IZL8 1130 aaKnown RBP18.76■□□□□ 0.59
SEMA6D-216ENST00000561106 WWC3Q9ULE0 1092 aa18.76■□□□□ 0.59
SEMA6D-216ENST00000561106 BCORQ6W2J9 1755 aa18.76■□□□□ 0.59
SEMA6D-216ENST00000561106 N4BP2Q86UW6 1770 aaPredicted RBP18.76■□□□□ 0.59
SEMA6D-216ENST00000561106 KIAA1551Q9HCM1 1747 aa18.75■□□□□ 0.59
SEMA6D-216ENST00000561106 NRXN2Q9P2S2 1712 aa18.75■□□□□ 0.59
SEMA6D-216ENST00000561106 DPEP1P16444 411 aa18.75■□□□□ 0.59
SEMA6D-216ENST00000561106 KCNA3P22001 575 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms