RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 ZBTB1Q9Y2K1 713 aa20.11■□□□□ 0.81
SNRPA1-213ENST00000560856 PRAMEF22A3QJZ6 481 aa20.1■□□□□ 0.81
SNRPA1-213ENST00000560856 LMOD3Q0VAK6 560 aa20.1■□□□□ 0.81
SNRPA1-213ENST00000560856 ARXQ96QS3 562 aa20.1■□□□□ 0.81
SNRPA1-213ENST00000560856 PPP1R1BQ9UD71 204 aaPredicted RBP20.1■□□□□ 0.81
SNRPA1-213ENST00000560856 USP16Q9Y5T5 823 aa20.1■□□□□ 0.81
SNRPA1-213ENST00000560856 STARD3NLO95772 234 aa20.09■□□□□ 0.81
SNRPA1-213ENST00000560856 SNRPA1P09661 255 aaKnown RBP20.08■□□□□ 0.81
SNRPA1-213ENST00000560856 POLD1P28340 1107 aa20.08■□□□□ 0.81
SNRPA1-213ENST00000560856 EIF4A1P60842 406 aaKnown RBP20.08■□□□□ 0.81
SNRPA1-213ENST00000560856 KDM3BQ7LBC6 1761 aa20.08■□□□□ 0.8
SNRPA1-213ENST00000560856 EIF5P55010 431 aaKnown RBP20.07■□□□□ 0.8
SNRPA1-213ENST00000560856 A1BGP04217 495 aa20.06■□□□□ 0.8
SNRPA1-213ENST00000560856 GYS1P13807 737 aa20.06■□□□□ 0.8
SNRPA1-213ENST00000560856 RFC4P35249 363 aa20.06■□□□□ 0.8
SNRPA1-213ENST00000560856 FHDC1Q9C0D6 1143 aaPredicted RBP20.06■□□□□ 0.8
SNRPA1-213ENST00000560856 BABAM1Q9NWV8 329 aa20.06■□□□□ 0.8
SNRPA1-213ENST00000560856 SRP68Q9UHB9 627 aaKnown RBP20.06■□□□□ 0.8
SNRPA1-213ENST00000560856 C4AP0C0L4 1744 aa20.05■□□□□ 0.8
SNRPA1-213ENST00000560856 CHL1O00533 1208 aa20.05■□□□□ 0.8
SNRPA1-213ENST00000560856 CANXP27824 592 aaKnown RBP20.05■□□□□ 0.8
SNRPA1-213ENST00000560856 SYT17Q9BSW7 474 aa20.05■□□□□ 0.8
SNRPA1-213ENST00000560856 USP42Q9H9J4 1324 aaKnown RBP20.04■□□□□ 0.8
SNRPA1-213ENST00000560856 GIGYF1O75420 1035 aaPredicted RBP20.04■□□□□ 0.8
SNRPA1-213ENST00000560856 TSPYL4Q9UJ04 414 aa20.04■□□□□ 0.8
SNRPA1-213ENST00000560856 NLGN1Q8N2Q7 840 aa20.03■□□□□ 0.8
SNRPA1-213ENST00000560856 COL15A1P39059 1388 aa20.03■□□□□ 0.8
SNRPA1-213ENST00000560856 IL6STP40189 918 aaPredicted RBP20.02■□□□□ 0.8
SNRPA1-213ENST00000560856 BCL2L12Q9HB09 334 aa20.02■□□□□ 0.8
SNRPA1-213ENST00000560856 NARFQ9UHQ1 456 aa20.02■□□□□ 0.8
SNRPA1-213ENST00000560856 NBPF26B4DH59 902 aa20.01■□□□□ 0.79
SNRPA1-213ENST00000560856 ZNF853P0CG23 659 aa20.01■□□□□ 0.79
SNRPA1-213ENST00000560856 FKBP8Q14318 412 aa20.01■□□□□ 0.79
SNRPA1-213ENST00000560856 NBPF10Q6P3W6 841 aaKnown RBP20.01■□□□□ 0.79
SNRPA1-213ENST00000560856 NBPF15Q8N660 670 aa20.01■□□□□ 0.79
SNRPA1-213ENST00000560856 MMP10P09238 476 aa20■□□□□ 0.79
SNRPA1-213ENST00000560856 PIP4K2AP48426 406 aaPredicted RBP20■□□□□ 0.79
SNRPA1-213ENST00000560856 USPL1Q5W0Q7 1092 aa19.99■□□□□ 0.79
SNRPA1-213ENST00000560856 CFAP44Q96MT7 982 aa19.99■□□□□ 0.79
SNRPA1-213ENST00000560856 SENP3-EIF4A1A0A087X0R7 540 aa19.98■□□□□ 0.79
SNRPA1-213ENST00000560856 TM4SF1P30408 202 aa19.98■□□□□ 0.79
SNRPA1-213ENST00000560856 CCDC27Q2M243 656 aa19.98■□□□□ 0.79
SNRPA1-213ENST00000560856 NCBP3Q53F19 620 aaKnown RBP19.98■□□□□ 0.79
SNRPA1-213ENST00000560856 A0A087WZG4 1122 aa19.97■□□□□ 0.79
SNRPA1-213ENST00000560856 ZPR1O75312 459 aa19.97■□□□□ 0.79
SNRPA1-213ENST00000560856 DDR1Q08345 913 aa19.96■□□□□ 0.79
SNRPA1-213ENST00000560856 KRT24Q2M2I5 525 aa19.96■□□□□ 0.79
SNRPA1-213ENST00000560856 FAM9BQ8IZU0 186 aa19.96■□□□□ 0.79
SNRPA1-213ENST00000560856 NLGN2Q8NFZ4 835 aa19.96■□□□□ 0.79
SNRPA1-213ENST00000560856 TBC1D2BQ9UPU7 963 aa19.96■□□□□ 0.79
SNRPA1-213ENST00000560856 LAS1LQ9Y4W2 734 aaKnown RBP19.96■□□□□ 0.79
SNRPA1-213ENST00000560856 CD2APQ9Y5K6 639 aa19.96■□□□□ 0.79
SNRPA1-213ENST00000560856 CAMTA2O94983 1202 aa19.95■□□□□ 0.78
SNRPA1-213ENST00000560856 WWC1Q8IX03 1113 aa19.95■□□□□ 0.78
SNRPA1-213ENST00000560856 MBIPQ9NS73 344 aa19.95■□□□□ 0.78
SNRPA1-213ENST00000560856 IFT57Q9NWB7 429 aa19.95■□□□□ 0.78
SNRPA1-213ENST00000560856 LAMB4A4D0S4 1761 aa19.95■□□□□ 0.78
SNRPA1-213ENST00000560856 ZNF330Q9Y3S2 320 aaPredicted RBP19.94■□□□□ 0.78
SNRPA1-213ENST00000560856 POLRMTO00411 1230 aaKnown RBP19.93■□□□□ 0.78
SNRPA1-213ENST00000560856 NFIXQ14938 502 aa19.93■□□□□ 0.78
SNRPA1-213ENST00000560856 KLHL34Q8N239 644 aa19.93■□□□□ 0.78
SNRPA1-213ENST00000560856 CCER2I3L3R5 266 aa19.92■□□□□ 0.78
SNRPA1-213ENST00000560856 GNAI1P63096 354 aa19.92■□□□□ 0.78
SNRPA1-213ENST00000560856 CALD1Q05682 793 aaKnown RBP19.92■□□□□ 0.78
SNRPA1-213ENST00000560856 PDIA6Q15084 440 aa19.92■□□□□ 0.78
SNRPA1-213ENST00000560856 LRP10Q7Z4F1 713 aa19.92■□□□□ 0.78
SNRPA1-213ENST00000560856 DZIP3Q86Y13 1208 aaKnown RBP19.92■□□□□ 0.78
SNRPA1-213ENST00000560856 PARP3Q9Y6F1 533 aa19.92■□□□□ 0.78
SNRPA1-213ENST00000560856 ERBB4Q15303 1308 aa19.91■□□□□ 0.78
SNRPA1-213ENST00000560856 TBC1D9BQ66K14 1250 aa19.9■□□□□ 0.78
SNRPA1-213ENST00000560856 C10orf71Q711Q0 1435 aa19.9■□□□□ 0.78
SNRPA1-213ENST00000560856 EIF2S2P20042 333 aaKnown RBP19.89■□□□□ 0.77
SNRPA1-213ENST00000560856 SCN7AQ01118 1682 aa19.89■□□□□ 0.77
SNRPA1-213ENST00000560856 DIEXFQ68CQ4 756 aaKnown RBP19.89■□□□□ 0.77
SNRPA1-213ENST00000560856 IL16Q14005 1332 aa19.88■□□□□ 0.77
SNRPA1-213ENST00000560856 HOXB7P09629 217 aa19.88■□□□□ 0.77
SNRPA1-213ENST00000560856 PROSER3Q2NL68 480 aa19.88■□□□□ 0.77
SNRPA1-213ENST00000560856 NPM2Q86SE8 214 aaKnown RBP19.88■□□□□ 0.77
SNRPA1-213ENST00000560856 KIF13BQ9NQT8 1826 aa19.88■□□□□ 0.77
SNRPA1-213ENST00000560856 RGL2O15211 777 aa19.87■□□□□ 0.77
SNRPA1-213ENST00000560856 MYL6BP14649 208 aa19.87■□□□□ 0.77
SNRPA1-213ENST00000560856 DUSP27Q5VZP5 1158 aa19.87■□□□□ 0.77
SNRPA1-213ENST00000560856 CLEC4GQ6UXB4 293 aa19.87■□□□□ 0.77
SNRPA1-213ENST00000560856 TTLL7Q6ZT98 887 aa19.87■□□□□ 0.77
SNRPA1-213ENST00000560856 SALL2Q9Y467 1007 aaPredicted RBP19.87■□□□□ 0.77
SNRPA1-213ENST00000560856 BCORQ6W2J9 1755 aa19.86■□□□□ 0.77
SNRPA1-213ENST00000560856 ANXA1P04083 346 aa19.86■□□□□ 0.77
SNRPA1-213ENST00000560856 SERPINB2P05120 415 aa19.86■□□□□ 0.77
SNRPA1-213ENST00000560856 HLFQ16534 295 aa19.86■□□□□ 0.77
SNRPA1-213ENST00000560856 WDR63Q8IWG1 891 aa19.86■□□□□ 0.77
SNRPA1-213ENST00000560856 NGEFQ8N5V2 710 aa19.86■□□□□ 0.77
SNRPA1-213ENST00000560856 C8orf58Q8NAV2 365 aa19.86■□□□□ 0.77
SNRPA1-213ENST00000560856 NRXN2Q9P2S2 1712 aa19.85■□□□□ 0.77
SNRPA1-213ENST00000560856 BICDL1Q6ZP65 573 aa19.85■□□□□ 0.77
SNRPA1-213ENST00000560856 MIER1Q8N108 512 aa19.85■□□□□ 0.77
SNRPA1-213ENST00000560856 NECTIN2Q92692 538 aa19.85■□□□□ 0.77
SNRPA1-213ENST00000560856 TSR2Q969E8 191 aaKnown RBP19.85■□□□□ 0.77
SNRPA1-213ENST00000560856 KIAA1551Q9HCM1 1747 aa19.85■□□□□ 0.77
SNRPA1-213ENST00000560856 AFDNP55196 1824 aaKnown RBP19.84■□□□□ 0.77
SNRPA1-213ENST00000560856 ERVV-1B6SEH8 477 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms