RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 SNRPA1P09661 255 aaKnown RBP20.24■□□□□ 0.83
LYSMD2-204ENST00000560491 ZNF853P0CG23 659 aa20.24■□□□□ 0.83
LYSMD2-204ENST00000560491 COL23A1Q86Y22 540 aaPredicted RBP20.24■□□□□ 0.83
LYSMD2-204ENST00000560491 MBIPQ9NS73 344 aa20.24■□□□□ 0.83
LYSMD2-204ENST00000560491 CCDC87Q9NVE4 849 aa20.24■□□□□ 0.83
LYSMD2-204ENST00000560491 IFT57Q9NWB7 429 aa20.24■□□□□ 0.83
LYSMD2-204ENST00000560491 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.23■□□□□ 0.83
LYSMD2-204ENST00000560491 STARD3NLO95772 234 aa20.23■□□□□ 0.83
LYSMD2-204ENST00000560491 TEX13AQ9BXU3 409 aaPredicted RBP20.23■□□□□ 0.83
LYSMD2-204ENST00000560491 ZBTB1Q9Y2K1 713 aa20.23■□□□□ 0.83
LYSMD2-204ENST00000560491 USP16Q9Y5T5 823 aa20.23■□□□□ 0.83
LYSMD2-204ENST00000560491 GIGYF1O75420 1035 aaPredicted RBP20.22■□□□□ 0.83
LYSMD2-204ENST00000560491 SSFA2P28290 1259 aa20.22■□□□□ 0.83
LYSMD2-204ENST00000560491 GNAI1P63096 354 aa20.22■□□□□ 0.83
LYSMD2-204ENST00000560491 KRT24Q2M2I5 525 aa20.22■□□□□ 0.83
LYSMD2-204ENST00000560491 RTCBQ9Y3I0 505 aaKnown RBP20.22■□□□□ 0.83
LYSMD2-204ENST00000560491 RPS6KA4O75676 772 aa20.21■□□□□ 0.83
LYSMD2-204ENST00000560491 ZBTB7AO95365 584 aa20.21■□□□□ 0.83
LYSMD2-204ENST00000560491 CANXP27824 592 aaKnown RBP20.2■□□□□ 0.82
LYSMD2-204ENST00000560491 A1BGP04217 495 aa20.19■□□□□ 0.82
LYSMD2-204ENST00000560491 PIP4K2AP48426 406 aaPredicted RBP20.19■□□□□ 0.82
LYSMD2-204ENST00000560491 NGEFQ8N5V2 710 aa20.19■□□□□ 0.82
LYSMD2-204ENST00000560491 FLAD1Q8NFF5 587 aa20.19■□□□□ 0.82
LYSMD2-204ENST00000560491 TSR2Q969E8 191 aaKnown RBP20.19■□□□□ 0.82
LYSMD2-204ENST00000560491 SOS1Q07889 1333 aaPredicted RBP20.19■□□□□ 0.82
LYSMD2-204ENST00000560491 LRP5O75197 1615 aa20.18■□□□□ 0.82
LYSMD2-204ENST00000560491 TRAPPC3LQ5T215 181 aa20.18■□□□□ 0.82
LYSMD2-204ENST00000560491 WDR63Q8IWG1 891 aa20.18■□□□□ 0.82
LYSMD2-204ENST00000560491 IL16Q14005 1332 aa20.18■□□□□ 0.82
LYSMD2-204ENST00000560491 ZNF521Q96K83 1311 aa20.18■□□□□ 0.82
LYSMD2-204ENST00000560491 COL24A1Q17RW2 1714 aa20.17■□□□□ 0.82
LYSMD2-204ENST00000560491 ADRA2BP18089 450 aa20.17■□□□□ 0.82
LYSMD2-204ENST00000560491 ARHGEF1Q92888 912 aaKnown RBP20.17■□□□□ 0.82
LYSMD2-204ENST00000560491 ATF5Q9Y2D1 282 aaPredicted RBP20.17■□□□□ 0.82
LYSMD2-204ENST00000560491 COL15A1P39059 1388 aa20.17■□□□□ 0.82
LYSMD2-204ENST00000560491 MSL1Q68DK7 614 aa20.16■□□□□ 0.82
LYSMD2-204ENST00000560491 MTFR1LQ9H019 292 aa20.16■□□□□ 0.82
LYSMD2-204ENST00000560491 SPINK5Q9NQ38 1064 aaPredicted RBP20.16■□□□□ 0.82
LYSMD2-204ENST00000560491 ZNF330Q9Y3S2 320 aaPredicted RBP20.16■□□□□ 0.82
LYSMD2-204ENST00000560491 FANCIQ9NVI1 1328 aa20.14■□□□□ 0.81
LYSMD2-204ENST00000560491 NBPF26B4DH59 902 aa20.14■□□□□ 0.81
LYSMD2-204ENST00000560491 EIF2S2P20042 333 aaKnown RBP20.14■□□□□ 0.81
LYSMD2-204ENST00000560491 RFC4P35249 363 aa20.14■□□□□ 0.81
LYSMD2-204ENST00000560491 NBPF10Q6P3W6 841 aaKnown RBP20.14■□□□□ 0.81
LYSMD2-204ENST00000560491 NBPF15Q8N660 670 aa20.14■□□□□ 0.81
LYSMD2-204ENST00000560491 SLC16A10Q8TF71 515 aa20.14■□□□□ 0.81
LYSMD2-204ENST00000560491 NECTIN2Q92692 538 aa20.14■□□□□ 0.81
LYSMD2-204ENST00000560491 IL6STP40189 918 aaPredicted RBP20.13■□□□□ 0.81
LYSMD2-204ENST00000560491 EIF5P55010 431 aaKnown RBP20.13■□□□□ 0.81
LYSMD2-204ENST00000560491 DUSP27Q5VZP5 1158 aa20.13■□□□□ 0.81
LYSMD2-204ENST00000560491 C8orf58Q8NAV2 365 aa20.13■□□□□ 0.81
LYSMD2-204ENST00000560491 SPON1Q9HCB6 807 aa20.13■□□□□ 0.81
LYSMD2-204ENST00000560491 SRP68Q9UHB9 627 aaKnown RBP20.13■□□□□ 0.81
LYSMD2-204ENST00000560491 SCN7AQ01118 1682 aa20.13■□□□□ 0.81
LYSMD2-204ENST00000560491 USP42Q9H9J4 1324 aaKnown RBP20.12■□□□□ 0.81
LYSMD2-204ENST00000560491 ELL2O00472 640 aaPredicted RBP20.12■□□□□ 0.81
LYSMD2-204ENST00000560491 BCORQ6W2J9 1755 aa20.12■□□□□ 0.81
LYSMD2-204ENST00000560491 PTGER2P43116 358 aa20.11■□□□□ 0.81
LYSMD2-204ENST00000560491 HNRNPUQ00839 825 aaKnown RBP eCLIP20.1■□□□□ 0.81
LYSMD2-204ENST00000560491 TSPYL6Q8N831 410 aa20.1■□□□□ 0.81
LYSMD2-204ENST00000560491 SGIP1Q9BQI5 828 aa20.1■□□□□ 0.81
LYSMD2-204ENST00000560491 SRCAPQ6ZRS2 3230 aa20.1■□□□□ 0.81
LYSMD2-204ENST00000560491 ANXA1P04083 346 aa20.09■□□□□ 0.81
LYSMD2-204ENST00000560491 HOXB7P09629 217 aa20.09■□□□□ 0.81
LYSMD2-204ENST00000560491 GYS1P13807 737 aa20.09■□□□□ 0.81
LYSMD2-204ENST00000560491 MYL6BP14649 208 aa20.09■□□□□ 0.81
LYSMD2-204ENST00000560491 PROSER3Q2NL68 480 aa20.09■□□□□ 0.81
LYSMD2-204ENST00000560491 HDGFL1Q5TGJ6 251 aa20.09■□□□□ 0.81
LYSMD2-204ENST00000560491 USPL1Q5W0Q7 1092 aa20.09■□□□□ 0.81
LYSMD2-204ENST00000560491 TBC1D2BQ9UPU7 963 aa20.09■□□□□ 0.81
LYSMD2-204ENST00000560491 ZPR1O75312 459 aa20.08■□□□□ 0.81
LYSMD2-204ENST00000560491 GOLGA2Q08379 1002 aa20.08■□□□□ 0.81
LYSMD2-204ENST00000560491 ARXQ96QS3 562 aa20.08■□□□□ 0.81
LYSMD2-204ENST00000560491 MYH16Q9H6N6 1097 aa20.08■□□□□ 0.81
LYSMD2-204ENST00000560491 NARFQ9UHQ1 456 aa20.08■□□□□ 0.81
LYSMD2-204ENST00000560491 ERBB4Q15303 1308 aa20.07■□□□□ 0.8
LYSMD2-204ENST00000560491 A0A087WZG4 1122 aa20.07■□□□□ 0.8
LYSMD2-204ENST00000560491 PDIA6Q15084 440 aa20.07■□□□□ 0.8
LYSMD2-204ENST00000560491 NPM2Q86SE8 214 aaKnown RBP20.07■□□□□ 0.8
LYSMD2-204ENST00000560491 CDCA7LQ96GN5 454 aa20.07■□□□□ 0.8
LYSMD2-204ENST00000560491 CHPF2Q9P2E5 772 aa20.07■□□□□ 0.8
LYSMD2-204ENST00000560491 EXOSC9Q06265 439 aaKnown RBP20.06■□□□□ 0.8
LYSMD2-204ENST00000560491 FKBP8Q14318 412 aa20.06■□□□□ 0.8
LYSMD2-204ENST00000560491 DZIP3Q86Y13 1208 aaKnown RBP20.06■□□□□ 0.8
LYSMD2-204ENST00000560491 BCL2L12Q9HB09 334 aa20.06■□□□□ 0.8
LYSMD2-204ENST00000560491 E9PSI1 815 aa20.05■□□□□ 0.8
LYSMD2-204ENST00000560491 TWISTNBQ3B726 338 aaPredicted RBP20.05■□□□□ 0.8
LYSMD2-204ENST00000560491 LRP10Q7Z4F1 713 aa20.05■□□□□ 0.8
LYSMD2-204ENST00000560491 CAMTA2O94983 1202 aa20.04■□□□□ 0.8
LYSMD2-204ENST00000560491 POLD1P28340 1107 aa20.04■□□□□ 0.8
LYSMD2-204ENST00000560491 SLFN5Q08AF3 891 aa20.04■□□□□ 0.8
LYSMD2-204ENST00000560491 TTLL7Q6ZT98 887 aa20.04■□□□□ 0.8
LYSMD2-204ENST00000560491 MMP10P09238 476 aa20.03■□□□□ 0.8
LYSMD2-204ENST00000560491 NLGN1Q8N2Q7 840 aa20.03■□□□□ 0.8
LYSMD2-204ENST00000560491 DDX21Q9NR30 783 aaKnown RBP eCLIP20.03■□□□□ 0.8
LYSMD2-204ENST00000560491 PPP1R1BQ9UD71 204 aaPredicted RBP20.03■□□□□ 0.8
LYSMD2-204ENST00000560491 NUP98P52948 1817 aa20.02■□□□□ 0.8
LYSMD2-204ENST00000560491 TCERG1O14776 1098 aaKnown RBP20.02■□□□□ 0.8
LYSMD2-204ENST00000560491 DBF4Q9UBU7 674 aaPredicted RBP20.01■□□□□ 0.79
LYSMD2-204ENST00000560491 AFDNP55196 1824 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms