RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 EIF4A1P60842 406 aaKnown RBP18.22■□□□□ 0.51
PKNOX1-209ENST00000560448 WWC1Q8IX03 1113 aa18.22■□□□□ 0.51
PKNOX1-209ENST00000560448 SPON1Q9HCB6 807 aa18.22■□□□□ 0.51
PKNOX1-209ENST00000560448 KCNQ3O43525 872 aa18.21■□□□□ 0.51
PKNOX1-209ENST00000560448 TRAPPC3LQ5T215 181 aa18.21■□□□□ 0.51
PKNOX1-209ENST00000560448 WDR63Q8IWG1 891 aa18.21■□□□□ 0.51
PKNOX1-209ENST00000560448 CHMP4AQ9BY43 222 aa18.21■□□□□ 0.51
PKNOX1-209ENST00000560448 LAMB4A4D0S4 1761 aa18.21■□□□□ 0.51
PKNOX1-209ENST00000560448 MYH14Q7Z406 1995 aaKnown RBP18.21■□□□□ 0.51
PKNOX1-209ENST00000560448 GIGYF1O75420 1035 aaPredicted RBP18.2■□□□□ 0.5
PKNOX1-209ENST00000560448 HOXB7P09629 217 aa18.2■□□□□ 0.5
PKNOX1-209ENST00000560448 ZNF853P0CG23 659 aa18.2■□□□□ 0.5
PKNOX1-209ENST00000560448 INTS5Q6P9B9 1019 aaKnown RBP18.2■□□□□ 0.5
PKNOX1-209ENST00000560448 SOS1Q07889 1333 aaPredicted RBP18.19■□□□□ 0.5
PKNOX1-209ENST00000560448 ERBB4Q15303 1308 aa18.19■□□□□ 0.5
PKNOX1-209ENST00000560448 COL23A1Q86Y22 540 aaPredicted RBP18.19■□□□□ 0.5
PKNOX1-209ENST00000560448 MIS18AQ9NYP9 233 aa18.19■□□□□ 0.5
PKNOX1-209ENST00000560448 A0A087WZG4 1122 aa18.18■□□□□ 0.5
PKNOX1-209ENST00000560448 IL6STP40189 918 aaPredicted RBP18.18■□□□□ 0.5
PKNOX1-209ENST00000560448 NPM2Q86SE8 214 aaKnown RBP18.18■□□□□ 0.5
PKNOX1-209ENST00000560448 COL24A1Q17RW2 1714 aa18.18■□□□□ 0.5
PKNOX1-209ENST00000560448 PHF14O94880 888 aa18.16■□□□□ 0.5
PKNOX1-209ENST00000560448 RFC4P35249 363 aa18.16■□□□□ 0.5
PKNOX1-209ENST00000560448 ZBTB1Q9Y2K1 713 aa18.16■□□□□ 0.5
PKNOX1-209ENST00000560448 MSH5O43196 834 aa18.15■□□□□ 0.5
PKNOX1-209ENST00000560448 ARHGEF1Q92888 912 aaKnown RBP18.15■□□□□ 0.5
PKNOX1-209ENST00000560448 MBIPQ9NS73 344 aa18.15■□□□□ 0.5
PKNOX1-209ENST00000560448 LAS1LQ9Y4W2 734 aaKnown RBP18.15■□□□□ 0.5
PKNOX1-209ENST00000560448 USP16Q9Y5T5 823 aa18.15■□□□□ 0.5
PKNOX1-209ENST00000560448 COL15A1P39059 1388 aa18.15■□□□□ 0.5
PKNOX1-209ENST00000560448 RGL2O15211 777 aa18.15■□□□□ 0.5
PKNOX1-209ENST00000560448 POLD1P28340 1107 aa18.15■□□□□ 0.5
PKNOX1-209ENST00000560448 EIF5P55010 431 aaKnown RBP18.15■□□□□ 0.5
PKNOX1-209ENST00000560448 NLGN1Q8N2Q7 840 aa18.15■□□□□ 0.5
PKNOX1-209ENST00000560448 PDGFDQ9GZP0 370 aaPredicted RBP18.15■□□□□ 0.5
PKNOX1-209ENST00000560448 ZBTB7AO95365 584 aa18.14■□□□□ 0.49
PKNOX1-209ENST00000560448 C4AP0C0L4 1744 aa18.13■□□□□ 0.49
PKNOX1-209ENST00000560448 USP42Q9H9J4 1324 aaKnown RBP18.13■□□□□ 0.49
PKNOX1-209ENST00000560448 AMIGO3Q86WK7 504 aa18.13■□□□□ 0.49
PKNOX1-209ENST00000560448 ZPR1O75312 459 aa18.12■□□□□ 0.49
PKNOX1-209ENST00000560448 CANXP27824 592 aaKnown RBP18.12■□□□□ 0.49
PKNOX1-209ENST00000560448 SGIP1Q9BQI5 828 aa18.12■□□□□ 0.49
PKNOX1-209ENST00000560448 MYH16Q9H6N6 1097 aa18.12■□□□□ 0.49
PKNOX1-209ENST00000560448 NARFQ9UHQ1 456 aa18.12■□□□□ 0.49
PKNOX1-209ENST00000560448 ZNF521Q96K83 1311 aa18.11■□□□□ 0.49
PKNOX1-209ENST00000560448 PRAMEF22A3QJZ6 481 aa18.1■□□□□ 0.49
PKNOX1-209ENST00000560448 A1BGP04217 495 aa18.1■□□□□ 0.49
PKNOX1-209ENST00000560448 PTGER2P43116 358 aa18.1■□□□□ 0.49
PKNOX1-209ENST00000560448 ATF5Q9Y2D1 282 aaPredicted RBP18.09■□□□□ 0.49
PKNOX1-209ENST00000560448 GYS1P13807 737 aa18.08■□□□□ 0.49
PKNOX1-209ENST00000560448 GOLGA2Q08379 1002 aa18.08■□□□□ 0.49
PKNOX1-209ENST00000560448 PPP1R1BQ9UD71 204 aaPredicted RBP18.08■□□□□ 0.49
PKNOX1-209ENST00000560448 DUSP27Q5VZP5 1158 aa18.07■□□□□ 0.48
PKNOX1-209ENST00000560448 CLEC4GQ6UXB4 293 aa18.07■□□□□ 0.48
PKNOX1-209ENST00000560448 SALL2Q9Y467 1007 aaPredicted RBP18.07■□□□□ 0.48
PKNOX1-209ENST00000560448 SCN7AQ01118 1682 aa18.07■□□□□ 0.48
PKNOX1-209ENST00000560448 NBPF26B4DH59 902 aa18.06■□□□□ 0.48
PKNOX1-209ENST00000560448 E9PSI1 815 aa18.06■□□□□ 0.48
PKNOX1-209ENST00000560448 HDGFL1Q5TGJ6 251 aa18.06■□□□□ 0.48
PKNOX1-209ENST00000560448 NBPF10Q6P3W6 841 aaKnown RBP18.06■□□□□ 0.48
PKNOX1-209ENST00000560448 NBPF15Q8N660 670 aa18.06■□□□□ 0.48
PKNOX1-209ENST00000560448 ARXQ96QS3 562 aa18.06■□□□□ 0.48
PKNOX1-209ENST00000560448 DBF4Q9UBU7 674 aaPredicted RBP18.06■□□□□ 0.48
PKNOX1-209ENST00000560448 ZNF652Q9Y2D9 606 aa18.06■□□□□ 0.48
PKNOX1-209ENST00000560448 FANCIQ9NVI1 1328 aa18.06■□□□□ 0.48
PKNOX1-209ENST00000560448 DZIP3Q86Y13 1208 aaKnown RBP18.06■□□□□ 0.48
PKNOX1-209ENST00000560448 DDX21Q9NR30 783 aaKnown RBP eCLIP18.06■□□□□ 0.48
PKNOX1-209ENST00000560448 ZNF330Q9Y3S2 320 aaPredicted RBP18.06■□□□□ 0.48
PKNOX1-209ENST00000560448 SRCAPQ6ZRS2 3230 aa18.05■□□□□ 0.48
PKNOX1-209ENST00000560448 ERVV-1B6SEH8 477 aa18.05■□□□□ 0.48
PKNOX1-209ENST00000560448 EIF2S2P20042 333 aaKnown RBP18.05■□□□□ 0.48
PKNOX1-209ENST00000560448 CCDC30Q5VVM6 783 aa18.05■□□□□ 0.48
PKNOX1-209ENST00000560448 USPL1Q5W0Q7 1092 aa18.05■□□□□ 0.48
PKNOX1-209ENST00000560448 BCORQ6W2J9 1755 aa18.04■□□□□ 0.48
PKNOX1-209ENST00000560448 SMIM5Q71RC9 77 aa18.04■□□□□ 0.48
PKNOX1-209ENST00000560448 HYPKQ9NX55 129 aa18.04■□□□□ 0.48
PKNOX1-209ENST00000560448 CAMTA2O94983 1202 aa18.03■□□□□ 0.48
PKNOX1-209ENST00000560448 PDIA6Q15084 440 aa18.03■□□□□ 0.48
PKNOX1-209ENST00000560448 KRT24Q2M2I5 525 aa18.03■□□□□ 0.48
PKNOX1-209ENST00000560448 TWISTNBQ3B726 338 aaPredicted RBP18.03■□□□□ 0.48
PKNOX1-209ENST00000560448 MSL1Q68DK7 614 aa18.03■□□□□ 0.48
PKNOX1-209ENST00000560448 KIF6Q6ZMV9 814 aa18.03■□□□□ 0.48
PKNOX1-209ENST00000560448 TSR2Q969E8 191 aaKnown RBP18.03■□□□□ 0.48
PKNOX1-209ENST00000560448 MMP10P09238 476 aa18.02■□□□□ 0.48
PKNOX1-209ENST00000560448 LRP10Q7Z4F1 713 aa18.02■□□□□ 0.48
PKNOX1-209ENST00000560448 SRP68Q9UHB9 627 aaKnown RBP18.02■□□□□ 0.48
PKNOX1-209ENST00000560448 TBC1D2BQ9UPU7 963 aa18.02■□□□□ 0.48
PKNOX1-209ENST00000560448 PARP3Q9Y6F1 533 aa18.02■□□□□ 0.48
PKNOX1-209ENST00000560448 MAP3K15Q6ZN16 1313 aa18.01■□□□□ 0.47
PKNOX1-209ENST00000560448 MYL6BP14649 208 aa18.01■□□□□ 0.47
PKNOX1-209ENST00000560448 TM4SF1P30408 202 aa18.01■□□□□ 0.47
PKNOX1-209ENST00000560448 C8orf58Q8NAV2 365 aa18.01■□□□□ 0.47
PKNOX1-209ENST00000560448 CD2APQ9Y5K6 639 aa18.01■□□□□ 0.47
PKNOX1-209ENST00000560448 SENP3-EIF4A1A0A087X0R7 540 aa18■□□□□ 0.47
PKNOX1-209ENST00000560448 FKBP8Q14318 412 aa18■□□□□ 0.47
PKNOX1-209ENST00000560448 STK31Q9BXU1 1019 aa18■□□□□ 0.47
PKNOX1-209ENST00000560448 CARMIL3Q8ND23 1372 aa18■□□□□ 0.47
PKNOX1-209ENST00000560448 PIP4K2AP48426 406 aaPredicted RBP17.99■□□□□ 0.47
PKNOX1-209ENST00000560448 SLFN5Q08AF3 891 aa17.99■□□□□ 0.47
PKNOX1-209ENST00000560448 ZNF428Q96B54 188 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms