RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 RPS6KA4O75676 772 aa15.62■□□□□ 0.09
RABGGTA-215ENST00000560207 DNAJC10Q8IXB1 793 aa15.62■□□□□ 0.09
RABGGTA-215ENST00000560207 LINC00116Q8NCU8 138 aa15.62■□□□□ 0.09
RABGGTA-215ENST00000560207 MIS18AQ9NYP9 233 aa15.62■□□□□ 0.09
RABGGTA-215ENST00000560207 ZNF521Q96K83 1311 aa15.62■□□□□ 0.09
RABGGTA-215ENST00000560207 E9PSI1 815 aa15.61■□□□□ 0.09
RABGGTA-215ENST00000560207 CRKLP46109 303 aaKnown RBP15.61■□□□□ 0.09
RABGGTA-215ENST00000560207 MBIPQ9NS73 344 aa15.61■□□□□ 0.09
RABGGTA-215ENST00000560207 CASZ1Q86V15 1759 aa15.6■□□□□ 0.09
RABGGTA-215ENST00000560207 GNPATO15228 680 aa15.6■□□□□ 0.09
RABGGTA-215ENST00000560207 KCNQ3O43525 872 aa15.6■□□□□ 0.09
RABGGTA-215ENST00000560207 IL6STP40189 918 aaPredicted RBP15.6■□□□□ 0.09
RABGGTA-215ENST00000560207 R3HDM1Q15032 1099 aaKnown RBP15.6■□□□□ 0.09
RABGGTA-215ENST00000560207 TRAPPC3LQ5T215 181 aa15.6■□□□□ 0.09
RABGGTA-215ENST00000560207 RGL2O15211 777 aa15.59■□□□□ 0.09
RABGGTA-215ENST00000560207 KCNQ4P56696 695 aa15.59■□□□□ 0.09
RABGGTA-215ENST00000560207 ANO8Q9HCE9 1232 aaPredicted RBP15.59■□□□□ 0.09
RABGGTA-215ENST00000560207 SALL2Q9Y467 1007 aaPredicted RBP15.59■□□□□ 0.09
RABGGTA-215ENST00000560207 ZNF827Q17R98 1081 aa15.58■□□□□ 0.08
RABGGTA-215ENST00000560207 INTS5Q6P9B9 1019 aaKnown RBP15.58■□□□□ 0.08
RABGGTA-215ENST00000560207 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.57■□□□□ 0.08
RABGGTA-215ENST00000560207 HNRNPUQ00839 825 aaKnown RBP eCLIP15.57■□□□□ 0.08
RABGGTA-215ENST00000560207 ZNF428Q96B54 188 aa15.57■□□□□ 0.08
RABGGTA-215ENST00000560207 USP16Q9Y5T5 823 aa15.57■□□□□ 0.08
RABGGTA-215ENST00000560207 COL24A1Q17RW2 1714 aa15.57■□□□□ 0.08
RABGGTA-215ENST00000560207 RFC4P35249 363 aa15.56■□□□□ 0.08
RABGGTA-215ENST00000560207 MTFR1LQ9H019 292 aa15.56■□□□□ 0.08
RABGGTA-215ENST00000560207 ZBED9Q6R2W3 1325 aa15.56■□□□□ 0.08
RABGGTA-215ENST00000560207 PNPLA7Q6ZV29 1317 aa15.56■□□□□ 0.08
RABGGTA-215ENST00000560207 C4AP0C0L4 1744 aa15.56■□□□□ 0.08
RABGGTA-215ENST00000560207 FANCIQ9NVI1 1328 aa15.55■□□□□ 0.08
RABGGTA-215ENST00000560207 CT47B1P0C2W7 299 aaPredicted RBP15.55■□□□□ 0.08
RABGGTA-215ENST00000560207 EIF5P55010 431 aaKnown RBP15.55■□□□□ 0.08
RABGGTA-215ENST00000560207 CCDC30Q5VVM6 783 aa15.55■□□□□ 0.08
RABGGTA-215ENST00000560207 DUSP27Q5VZP5 1158 aa15.55■□□□□ 0.08
RABGGTA-215ENST00000560207 DBF4Q9UBU7 674 aaPredicted RBP15.55■□□□□ 0.08
RABGGTA-215ENST00000560207 COL15A1P39059 1388 aa15.54■□□□□ 0.08
RABGGTA-215ENST00000560207 ZPR1O75312 459 aa15.54■□□□□ 0.08
RABGGTA-215ENST00000560207 SLFN5Q08AF3 891 aa15.54■□□□□ 0.08
RABGGTA-215ENST00000560207 HDGFL1Q5TGJ6 251 aa15.54■□□□□ 0.08
RABGGTA-215ENST00000560207 NLGN1Q8N2Q7 840 aa15.54■□□□□ 0.08
RABGGTA-215ENST00000560207 ZBTB1Q9Y2K1 713 aa15.54■□□□□ 0.08
RABGGTA-215ENST00000560207 PSDA5PKW4 1024 aaPredicted RBP15.53■□□□□ 0.08
RABGGTA-215ENST00000560207 MSH5O43196 834 aa15.53■□□□□ 0.08
RABGGTA-215ENST00000560207 CANXP27824 592 aaKnown RBP15.53■□□□□ 0.08
RABGGTA-215ENST00000560207 TWISTNBQ3B726 338 aaPredicted RBP15.53■□□□□ 0.08
RABGGTA-215ENST00000560207 COL23A1Q86Y22 540 aaPredicted RBP15.53■□□□□ 0.08
RABGGTA-215ENST00000560207 ARHGEF1Q92888 912 aaKnown RBP15.53■□□□□ 0.08
RABGGTA-215ENST00000560207 SPON1Q9HCB6 807 aa15.53■□□□□ 0.08
RABGGTA-215ENST00000560207 DDX21Q9NR30 783 aaKnown RBP eCLIP15.53■□□□□ 0.08
RABGGTA-215ENST00000560207 HYPKQ9NX55 129 aa15.53■□□□□ 0.08
RABGGTA-215ENST00000560207 NARFQ9UHQ1 456 aa15.53■□□□□ 0.08
RABGGTA-215ENST00000560207 A1BGP04217 495 aa15.52■□□□□ 0.08
RABGGTA-215ENST00000560207 EIF2S2P20042 333 aaKnown RBP15.52■□□□□ 0.08
RABGGTA-215ENST00000560207 CLEC4GQ6UXB4 293 aa15.52■□□□□ 0.08
RABGGTA-215ENST00000560207 TSR2Q969E8 191 aaKnown RBP15.52■□□□□ 0.08
RABGGTA-215ENST00000560207 STK31Q9BXU1 1019 aa15.52■□□□□ 0.08
RABGGTA-215ENST00000560207 ZNF652Q9Y2D9 606 aa15.52■□□□□ 0.08
RABGGTA-215ENST00000560207 LRP5O75197 1615 aa15.52■□□□□ 0.08
RABGGTA-215ENST00000560207 PHF14O94880 888 aa15.51■□□□□ 0.07
RABGGTA-215ENST00000560207 POLD1P28340 1107 aa15.51■□□□□ 0.07
RABGGTA-215ENST00000560207 TRMT2AQ8IZ69 625 aaKnown RBP15.51■□□□□ 0.07
RABGGTA-215ENST00000560207 BCORQ6W2J9 1755 aa15.51■□□□□ 0.07
RABGGTA-215ENST00000560207 SCN7AQ01118 1682 aa15.51■□□□□ 0.07
RABGGTA-215ENST00000560207 USP42Q9H9J4 1324 aaKnown RBP15.5■□□□□ 0.07
RABGGTA-215ENST00000560207 PRAMEF22A3QJZ6 481 aa15.5■□□□□ 0.07
RABGGTA-215ENST00000560207 ERVV-1B6SEH8 477 aa15.5■□□□□ 0.07
RABGGTA-215ENST00000560207 KIF6Q6ZMV9 814 aa15.5■□□□□ 0.07
RABGGTA-215ENST00000560207 C8orf58Q8NAV2 365 aa15.5■□□□□ 0.07
RABGGTA-215ENST00000560207 NUP98P52948 1817 aa15.5■□□□□ 0.07
RABGGTA-215ENST00000560207 NBPF26B4DH59 902 aa15.49■□□□□ 0.07
RABGGTA-215ENST00000560207 EXOSC9Q06265 439 aaKnown RBP15.49■□□□□ 0.07
RABGGTA-215ENST00000560207 NBPF10Q6P3W6 841 aaKnown RBP15.49■□□□□ 0.07
RABGGTA-215ENST00000560207 DZIP3Q86Y13 1208 aaKnown RBP15.49■□□□□ 0.07
RABGGTA-215ENST00000560207 NBPF15Q8N660 670 aa15.49■□□□□ 0.07
RABGGTA-215ENST00000560207 SENP3-EIF4A1A0A087X0R7 540 aa15.48■□□□□ 0.07
RABGGTA-215ENST00000560207 ELL2O00472 640 aaPredicted RBP15.47■□□□□ 0.07
RABGGTA-215ENST00000560207 VAMP4O75379 141 aa15.47■□□□□ 0.07
RABGGTA-215ENST00000560207 DDX58O95786 925 aaKnown RBP15.47■□□□□ 0.07
RABGGTA-215ENST00000560207 HSP90AB3PQ58FF7 597 aa15.47■□□□□ 0.07
RABGGTA-215ENST00000560207 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
RABGGTA-215ENST00000560207 ZNF330Q9Y3S2 320 aaPredicted RBP15.47■□□□□ 0.07
RABGGTA-215ENST00000560207 GYS1P13807 737 aa15.46■□□□□ 0.07
RABGGTA-215ENST00000560207 MYL6BP14649 208 aa15.46■□□□□ 0.07
RABGGTA-215ENST00000560207 PDIA6Q15084 440 aa15.46■□□□□ 0.07
RABGGTA-215ENST00000560207 KRT24Q2M2I5 525 aa15.46■□□□□ 0.07
RABGGTA-215ENST00000560207 CHPF2Q9P2E5 772 aa15.46■□□□□ 0.07
RABGGTA-215ENST00000560207 ANKRD36CQ5JPF3 1778 aa15.46■□□□□ 0.07
RABGGTA-215ENST00000560207 MAP3K15Q6ZN16 1313 aa15.45■□□□□ 0.06
RABGGTA-215ENST00000560207 ALDH1L2Q3SY69 923 aa15.45■□□□□ 0.06
RABGGTA-215ENST00000560207 USPL1Q5W0Q7 1092 aa15.45■□□□□ 0.06
RABGGTA-215ENST00000560207 TSPYL6Q8N831 410 aa15.45■□□□□ 0.06
RABGGTA-215ENST00000560207 ARXQ96QS3 562 aa15.45■□□□□ 0.06
RABGGTA-215ENST00000560207 CAMTA2O94983 1202 aa15.44■□□□□ 0.06
RABGGTA-215ENST00000560207 ZBTB7AO95365 584 aa15.44■□□□□ 0.06
RABGGTA-215ENST00000560207 AMIGO3Q86WK7 504 aa15.44■□□□□ 0.06
RABGGTA-215ENST00000560207 TBC1D2BQ9UPU7 963 aa15.44■□□□□ 0.06
RABGGTA-215ENST00000560207 ANKRD13DQ6ZTN6 518 aa15.43■□□□□ 0.06
RABGGTA-215ENST00000560207 COPS6Q7L5N1 327 aa15.43■□□□□ 0.06
RABGGTA-215ENST00000560207 LRP10Q7Z4F1 713 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms