RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 SNRPA1P09661 255 aaKnown RBP17.92■□□□□ 0.46
CHRNB4-204ENST00000559849 ARHGEF1Q92888 912 aaKnown RBP17.92■□□□□ 0.46
CHRNB4-204ENST00000559849 BABAM1Q9NWV8 329 aa17.92■□□□□ 0.46
CHRNB4-204ENST00000559849 POLD1P28340 1107 aa17.91■□□□□ 0.46
CHRNB4-204ENST00000559849 RFC4P35249 363 aa17.91■□□□□ 0.46
CHRNB4-204ENST00000559849 TSPYL4Q9UJ04 414 aa17.9■□□□□ 0.46
CHRNB4-204ENST00000559849 ZBTB1Q9Y2K1 713 aa17.89■□□□□ 0.45
CHRNB4-204ENST00000559849 USP16Q9Y5T5 823 aa17.89■□□□□ 0.45
CHRNB4-204ENST00000559849 KDM3BQ7LBC6 1761 aa17.89■□□□□ 0.45
CHRNB4-204ENST00000559849 ARXQ96QS3 562 aa17.89■□□□□ 0.45
CHRNB4-204ENST00000559849 COL24A1Q17RW2 1714 aa17.89■□□□□ 0.45
CHRNB4-204ENST00000559849 EIF4A1P60842 406 aaKnown RBP17.88■□□□□ 0.45
CHRNB4-204ENST00000559849 MSL1Q68DK7 614 aa17.88■□□□□ 0.45
CHRNB4-204ENST00000559849 FAM9BQ8IZU0 186 aa17.88■□□□□ 0.45
CHRNB4-204ENST00000559849 CANXP27824 592 aaKnown RBP17.87■□□□□ 0.45
CHRNB4-204ENST00000559849 SOS1Q07889 1333 aaPredicted RBP17.87■□□□□ 0.45
CHRNB4-204ENST00000559849 PRAMEF22A3QJZ6 481 aa17.87■□□□□ 0.45
CHRNB4-204ENST00000559849 NLGN1Q8N2Q7 840 aa17.87■□□□□ 0.45
CHRNB4-204ENST00000559849 CHL1O00533 1208 aa17.86■□□□□ 0.45
CHRNB4-204ENST00000559849 GIGYF1O75420 1035 aaPredicted RBP17.86■□□□□ 0.45
CHRNB4-204ENST00000559849 A1BGP04217 495 aa17.86■□□□□ 0.45
CHRNB4-204ENST00000559849 CALD1Q05682 793 aaKnown RBP17.86■□□□□ 0.45
CHRNB4-204ENST00000559849 DIEXFQ68CQ4 756 aaKnown RBP17.86■□□□□ 0.45
CHRNB4-204ENST00000559849 LAS1LQ9Y4W2 734 aaKnown RBP17.86■□□□□ 0.45
CHRNB4-204ENST00000559849 IL6STP40189 918 aaPredicted RBP17.85■□□□□ 0.45
CHRNB4-204ENST00000559849 EIF5P55010 431 aaKnown RBP17.85■□□□□ 0.45
CHRNB4-204ENST00000559849 NCBP3Q53F19 620 aaKnown RBP17.85■□□□□ 0.45
CHRNB4-204ENST00000559849 CFAP44Q96MT7 982 aa17.85■□□□□ 0.45
CHRNB4-204ENST00000559849 ZPR1O75312 459 aa17.84■□□□□ 0.45
CHRNB4-204ENST00000559849 GYS1P13807 737 aa17.84■□□□□ 0.45
CHRNB4-204ENST00000559849 CCDC27Q2M243 656 aa17.84■□□□□ 0.45
CHRNB4-204ENST00000559849 NPM2Q86SE8 214 aaKnown RBP17.84■□□□□ 0.45
CHRNB4-204ENST00000559849 COL15A1P39059 1388 aa17.84■□□□□ 0.45
CHRNB4-204ENST00000559849 USP42Q9H9J4 1324 aaKnown RBP17.84■□□□□ 0.45
CHRNB4-204ENST00000559849 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
CHRNB4-204ENST00000559849 C4AP0C0L4 1744 aa17.84■□□□□ 0.45
CHRNB4-204ENST00000559849 A0A087WZG4 1122 aa17.83■□□□□ 0.45
CHRNB4-204ENST00000559849 SRP68Q9UHB9 627 aaKnown RBP17.83■□□□□ 0.44
CHRNB4-204ENST00000559849 NARFQ9UHQ1 456 aa17.83■□□□□ 0.44
CHRNB4-204ENST00000559849 FHDC1Q9C0D6 1143 aaPredicted RBP17.82■□□□□ 0.44
CHRNB4-204ENST00000559849 ZNF330Q9Y3S2 320 aaPredicted RBP17.82■□□□□ 0.44
CHRNB4-204ENST00000559849 GNAI1P63096 354 aa17.81■□□□□ 0.44
CHRNB4-204ENST00000559849 USPL1Q5W0Q7 1092 aa17.81■□□□□ 0.44
CHRNB4-204ENST00000559849 WWC1Q8IX03 1113 aa17.81■□□□□ 0.44
CHRNB4-204ENST00000559849 SYT17Q9BSW7 474 aa17.81■□□□□ 0.44
CHRNB4-204ENST00000559849 IFT57Q9NWB7 429 aa17.81■□□□□ 0.44
CHRNB4-204ENST00000559849 SENP3-EIF4A1A0A087X0R7 540 aa17.81■□□□□ 0.44
CHRNB4-204ENST00000559849 ZNF853P0CG23 659 aa17.81■□□□□ 0.44
CHRNB4-204ENST00000559849 MMP10P09238 476 aa17.8■□□□□ 0.44
CHRNB4-204ENST00000559849 PIP4K2AP48426 406 aaPredicted RBP17.79■□□□□ 0.44
CHRNB4-204ENST00000559849 FKBP8Q14318 412 aa17.79■□□□□ 0.44
CHRNB4-204ENST00000559849 NBPF26B4DH59 902 aa17.79■□□□□ 0.44
CHRNB4-204ENST00000559849 NBPF10Q6P3W6 841 aaKnown RBP17.79■□□□□ 0.44
CHRNB4-204ENST00000559849 NGEFQ8N5V2 710 aa17.79■□□□□ 0.44
CHRNB4-204ENST00000559849 NBPF15Q8N660 670 aa17.79■□□□□ 0.44
CHRNB4-204ENST00000559849 MBIPQ9NS73 344 aa17.79■□□□□ 0.44
CHRNB4-204ENST00000559849 LAMB4A4D0S4 1761 aa17.79■□□□□ 0.44
CHRNB4-204ENST00000559849 KLHL34Q8N239 644 aa17.78■□□□□ 0.44
CHRNB4-204ENST00000559849 TBC1D2BQ9UPU7 963 aa17.78■□□□□ 0.44
CHRNB4-204ENST00000559849 SALL2Q9Y467 1007 aaPredicted RBP17.78■□□□□ 0.44
CHRNB4-204ENST00000559849 DZIP3Q86Y13 1208 aaKnown RBP17.77■□□□□ 0.44
CHRNB4-204ENST00000559849 PARP3Q9Y6F1 533 aa17.77■□□□□ 0.44
CHRNB4-204ENST00000559849 EIF2S2P20042 333 aaKnown RBP17.76■□□□□ 0.43
CHRNB4-204ENST00000559849 BCL2L12Q9HB09 334 aa17.76■□□□□ 0.43
CHRNB4-204ENST00000559849 CD2APQ9Y5K6 639 aa17.76■□□□□ 0.43
CHRNB4-204ENST00000559849 ERBB4Q15303 1308 aa17.76■□□□□ 0.43
CHRNB4-204ENST00000559849 TM4SF1P30408 202 aa17.76■□□□□ 0.43
CHRNB4-204ENST00000559849 IL16Q14005 1332 aa17.76■□□□□ 0.43
CHRNB4-204ENST00000559849 HOXB7P09629 217 aa17.75■□□□□ 0.43
CHRNB4-204ENST00000559849 KRT24Q2M2I5 525 aa17.75■□□□□ 0.43
CHRNB4-204ENST00000559849 MIER1Q8N108 512 aa17.75■□□□□ 0.43
CHRNB4-204ENST00000559849 WDR63Q8IWG1 891 aa17.75■□□□□ 0.43
CHRNB4-204ENST00000559849 CAMTA2O94983 1202 aa17.73■□□□□ 0.43
CHRNB4-204ENST00000559849 MYL6BP14649 208 aa17.73■□□□□ 0.43
CHRNB4-204ENST00000559849 GOLGB1Q14789 3259 aaKnown RBP17.73■□□□□ 0.43
CHRNB4-204ENST00000559849 UTRNP46939 3433 aa17.73■□□□□ 0.43
CHRNB4-204ENST00000559849 NFIXQ14938 502 aa17.73■□□□□ 0.43
CHRNB4-204ENST00000559849 DUSP27Q5VZP5 1158 aa17.73■□□□□ 0.43
CHRNB4-204ENST00000559849 CLEC4GQ6UXB4 293 aa17.73■□□□□ 0.43
CHRNB4-204ENST00000559849 DCAF8L1A6NGE4 600 aa17.72■□□□□ 0.43
CHRNB4-204ENST00000559849 DDR1Q08345 913 aa17.72■□□□□ 0.43
CHRNB4-204ENST00000559849 POLRMTO00411 1230 aaKnown RBP17.71■□□□□ 0.43
CHRNB4-204ENST00000559849 RGL2O15211 777 aa17.71■□□□□ 0.43
CHRNB4-204ENST00000559849 PDIA6Q15084 440 aa17.71■□□□□ 0.43
CHRNB4-204ENST00000559849 NECTIN2Q92692 538 aa17.71■□□□□ 0.43
CHRNB4-204ENST00000559849 ZNF652Q9Y2D9 606 aa17.71■□□□□ 0.43
CHRNB4-204ENST00000559849 HDGFL1Q5TGJ6 251 aa17.71■□□□□ 0.43
CHRNB4-204ENST00000559849 NLGN2Q8NFZ4 835 aa17.71■□□□□ 0.43
CHRNB4-204ENST00000559849 ELL2O00472 640 aaPredicted RBP17.7■□□□□ 0.42
CHRNB4-204ENST00000559849 TBC1D9BQ66K14 1250 aa17.7■□□□□ 0.42
CHRNB4-204ENST00000559849 BICDL1Q6ZP65 573 aa17.7■□□□□ 0.42
CHRNB4-204ENST00000559849 TSR2Q969E8 191 aaKnown RBP17.7■□□□□ 0.42
CHRNB4-204ENST00000559849 CHMP4AQ9BY43 222 aa17.7■□□□□ 0.42
CHRNB4-204ENST00000559849 SETDB2Q96T68 719 aa17.7■□□□□ 0.42
CHRNB4-204ENST00000559849 DDX21Q9NR30 783 aaKnown RBP eCLIP17.7■□□□□ 0.42
CHRNB4-204ENST00000559849 SCN7AQ01118 1682 aa17.69■□□□□ 0.42
CHRNB4-204ENST00000559849 ERVV-1B6SEH8 477 aa17.69■□□□□ 0.42
CHRNB4-204ENST00000559849 SERPINB2P05120 415 aa17.69■□□□□ 0.42
CHRNB4-204ENST00000559849 KIF6Q6ZMV9 814 aa17.69■□□□□ 0.42
CHRNB4-204ENST00000559849 C8orf58Q8NAV2 365 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms