RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 USP16Q9Y5T5 823 aa25.59■■□□□ 1.69
SHF-205ENST00000559566 MSL1Q68DK7 614 aa25.58■■□□□ 1.69
SHF-205ENST00000559566 TSPYL4Q9UJ04 414 aa25.58■■□□□ 1.69
SHF-205ENST00000559566 CCER2I3L3R5 266 aa25.57■■□□□ 1.68
SHF-205ENST00000559566 FLAD1Q8NFF5 587 aa25.57■■□□□ 1.68
SHF-205ENST00000559566 SLC16A10Q8TF71 515 aa25.57■■□□□ 1.68
SHF-205ENST00000559566 ARHGEF1Q92888 912 aaKnown RBP25.57■■□□□ 1.68
SHF-205ENST00000559566 CHL1O00533 1208 aa25.56■■□□□ 1.68
SHF-205ENST00000559566 SOS1Q07889 1333 aaPredicted RBP25.56■■□□□ 1.68
SHF-205ENST00000559566 A1BGP04217 495 aa25.55■■□□□ 1.68
SHF-205ENST00000559566 SNRPA1P09661 255 aaKnown RBP25.55■■□□□ 1.68
SHF-205ENST00000559566 PIP4K2AP48426 406 aaPredicted RBP25.54■■□□□ 1.68
SHF-205ENST00000559566 TRAPPC3LQ5T215 181 aa25.54■■□□□ 1.68
SHF-205ENST00000559566 LAS1LQ9Y4W2 734 aaKnown RBP25.54■■□□□ 1.68
SHF-205ENST00000559566 GIGYF1O75420 1035 aaPredicted RBP25.53■■□□□ 1.68
SHF-205ENST00000559566 STARD3NLO95772 234 aa25.53■■□□□ 1.68
SHF-205ENST00000559566 CANXP27824 592 aaKnown RBP25.53■■□□□ 1.68
SHF-205ENST00000559566 KRT24Q2M2I5 525 aa25.53■■□□□ 1.68
SHF-205ENST00000559566 TEX13AQ9BXU3 409 aaPredicted RBP25.53■■□□□ 1.68
SHF-205ENST00000559566 SALL2Q9Y467 1007 aaPredicted RBP25.53■■□□□ 1.68
SHF-205ENST00000559566 ZNF853P0CG23 659 aa25.52■■□□□ 1.68
SHF-205ENST00000559566 BABAM1Q9NWV8 329 aa25.52■■□□□ 1.68
SHF-205ENST00000559566 SRP68Q9UHB9 627 aaKnown RBP25.52■■□□□ 1.68
SHF-205ENST00000559566 COL24A1Q17RW2 1714 aa25.51■■□□□ 1.68
SHF-205ENST00000559566 ADRA2BP18089 450 aa25.51■■□□□ 1.67
SHF-205ENST00000559566 WWC1Q8IX03 1113 aa25.51■■□□□ 1.67
SHF-205ENST00000559566 C4AP0C0L4 1744 aa25.51■■□□□ 1.67
SHF-205ENST00000559566 CCDC27Q2M243 656 aa25.5■■□□□ 1.67
SHF-205ENST00000559566 CFAP44Q96MT7 982 aa25.5■■□□□ 1.67
SHF-205ENST00000559566 COL15A1P39059 1388 aa25.49■■□□□ 1.67
SHF-205ENST00000559566 NBPF26B4DH59 902 aa25.49■■□□□ 1.67
SHF-205ENST00000559566 EIF5P55010 431 aaKnown RBP25.49■■□□□ 1.67
SHF-205ENST00000559566 NBPF10Q6P3W6 841 aaKnown RBP25.49■■□□□ 1.67
SHF-205ENST00000559566 NBPF15Q8N660 670 aa25.49■■□□□ 1.67
SHF-205ENST00000559566 MBIPQ9NS73 344 aa25.49■■□□□ 1.67
SHF-205ENST00000559566 USP42Q9H9J4 1324 aaKnown RBP25.47■■□□□ 1.67
SHF-205ENST00000559566 GYS1P13807 737 aa25.47■■□□□ 1.67
SHF-205ENST00000559566 RFC4P35249 363 aa25.47■■□□□ 1.67
SHF-205ENST00000559566 IFT57Q9NWB7 429 aa25.47■■□□□ 1.67
SHF-205ENST00000559566 NCBP3Q53F19 620 aaKnown RBP25.46■■□□□ 1.67
SHF-205ENST00000559566 LAMB4A4D0S4 1761 aa25.46■■□□□ 1.67
SHF-205ENST00000559566 IL6STP40189 918 aaPredicted RBP25.44■■□□□ 1.66
SHF-205ENST00000559566 ARXQ96QS3 562 aa25.44■■□□□ 1.66
SHF-205ENST00000559566 BCL2L12Q9HB09 334 aa25.44■■□□□ 1.66
SHF-205ENST00000559566 ZNF330Q9Y3S2 320 aaPredicted RBP25.44■■□□□ 1.66
SHF-205ENST00000559566 FKBP8Q14318 412 aa25.43■■□□□ 1.66
SHF-205ENST00000559566 USPL1Q5W0Q7 1092 aa25.43■■□□□ 1.66
SHF-205ENST00000559566 PPP1R1BQ9UD71 204 aaPredicted RBP25.43■■□□□ 1.66
SHF-205ENST00000559566 GNAI1P63096 354 aa25.42■■□□□ 1.66
SHF-205ENST00000559566 CALD1Q05682 793 aaKnown RBP25.42■■□□□ 1.66
SHF-205ENST00000559566 TSR2Q969E8 191 aaKnown RBP25.42■■□□□ 1.66
SHF-205ENST00000559566 POLD1P28340 1107 aa25.41■■□□□ 1.66
SHF-205ENST00000559566 NARFQ9UHQ1 456 aa25.41■■□□□ 1.66
SHF-205ENST00000559566 TBC1D2BQ9UPU7 963 aa25.41■■□□□ 1.66
SHF-205ENST00000559566 EIF2S2P20042 333 aaKnown RBP25.4■■□□□ 1.66
SHF-205ENST00000559566 SPINK5Q9NQ38 1064 aaPredicted RBP25.4■■□□□ 1.66
SHF-205ENST00000559566 MMP10P09238 476 aa25.39■■□□□ 1.66
SHF-205ENST00000559566 NECTIN2Q92692 538 aa25.39■■□□□ 1.66
SHF-205ENST00000559566 FHDC1Q9C0D6 1143 aaPredicted RBP25.39■■□□□ 1.66
SHF-205ENST00000559566 PDIA6Q15084 440 aa25.38■■□□□ 1.65
SHF-205ENST00000559566 PROSER3Q2NL68 480 aa25.38■■□□□ 1.65
SHF-205ENST00000559566 NLGN1Q8N2Q7 840 aa25.38■■□□□ 1.65
SHF-205ENST00000559566 IL16Q14005 1332 aa25.37■■□□□ 1.65
SHF-205ENST00000559566 ZNF521Q96K83 1311 aa25.37■■□□□ 1.65
SHF-205ENST00000559566 ZPR1O75312 459 aa25.37■■□□□ 1.65
SHF-205ENST00000559566 CAMTA2O94983 1202 aa25.37■■□□□ 1.65
SHF-205ENST00000559566 ANXA1P04083 346 aa25.37■■□□□ 1.65
SHF-205ENST00000559566 DUSP27Q5VZP5 1158 aa25.37■■□□□ 1.65
SHF-205ENST00000559566 LRP10Q7Z4F1 713 aa25.37■■□□□ 1.65
SHF-205ENST00000559566 C8orf58Q8NAV2 365 aa25.37■■□□□ 1.65
SHF-205ENST00000559566 A0A087WZG4 1122 aa25.36■■□□□ 1.65
SHF-205ENST00000559566 DDR1Q08345 913 aa25.36■■□□□ 1.65
SHF-205ENST00000559566 DZIP3Q86Y13 1208 aaKnown RBP25.36■■□□□ 1.65
SHF-205ENST00000559566 WDR63Q8IWG1 891 aa25.36■■□□□ 1.65
SHF-205ENST00000559566 ELL2O00472 640 aaPredicted RBP25.35■■□□□ 1.65
SHF-205ENST00000559566 MYL6BP14649 208 aa25.35■■□□□ 1.65
SHF-205ENST00000559566 NGEFQ8N5V2 710 aa25.35■■□□□ 1.65
SHF-205ENST00000559566 TSPYL6Q8N831 410 aa25.35■■□□□ 1.65
SHF-205ENST00000559566 SCN7AQ01118 1682 aa25.35■■□□□ 1.65
SHF-205ENST00000559566 TM4SF1P30408 202 aa25.34■■□□□ 1.65
SHF-205ENST00000559566 SYT17Q9BSW7 474 aa25.34■■□□□ 1.65
SHF-205ENST00000559566 FANCIQ9NVI1 1328 aa25.34■■□□□ 1.65
SHF-205ENST00000559566 NFIXQ14938 502 aa25.33■■□□□ 1.65
SHF-205ENST00000559566 TTLL7Q6ZT98 887 aa25.33■■□□□ 1.65
SHF-205ENST00000559566 KLHL34Q8N239 644 aa25.33■■□□□ 1.65
SHF-205ENST00000559566 ERBB4Q15303 1308 aa25.33■■□□□ 1.64
SHF-205ENST00000559566 HOXB7P09629 217 aa25.32■■□□□ 1.64
SHF-205ENST00000559566 POLRMTO00411 1230 aaKnown RBP25.31■■□□□ 1.64
SHF-205ENST00000559566 HDGFL1Q5TGJ6 251 aa25.31■■□□□ 1.64
SHF-205ENST00000559566 TBC1D9BQ66K14 1250 aa25.31■■□□□ 1.64
SHF-205ENST00000559566 NLGN2Q8NFZ4 835 aa25.31■■□□□ 1.64
SHF-205ENST00000559566 CHPF2Q9P2E5 772 aa25.3■■□□□ 1.64
SHF-205ENST00000559566 BCORQ6W2J9 1755 aa25.3■■□□□ 1.64
SHF-205ENST00000559566 HLFQ16534 295 aa25.29■■□□□ 1.64
SHF-205ENST00000559566 BICDL1Q6ZP65 573 aa25.29■■□□□ 1.64
SHF-205ENST00000559566 NPM2Q86SE8 214 aaKnown RBP25.28■■□□□ 1.64
SHF-205ENST00000559566 PARP3Q9Y6F1 533 aa25.28■■□□□ 1.64
SHF-205ENST00000559566 DDX21Q9NR30 783 aaKnown RBP eCLIP25.27■■□□□ 1.64
SHF-205ENST00000559566 C10orf71Q711Q0 1435 aa25.26■■□□□ 1.63
SHF-205ENST00000559566 ZBTB3Q9H5J0 574 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms