RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ZBTB1Q9Y2K1 713 aa14.24□□□□□ -0.13
TPM1-217ENST00000559108 BCORQ6W2J9 1755 aa14.24□□□□□ -0.13
TPM1-217ENST00000559108 NBPF26B4DH59 902 aa14.23□□□□□ -0.13
TPM1-217ENST00000559108 HNRNPUQ00839 825 aaKnown RBP eCLIP14.23□□□□□ -0.13
TPM1-217ENST00000559108 NBPF14Q5TI25 921 aa14.23□□□□□ -0.13
TPM1-217ENST00000559108 NBPF10Q6P3W6 841 aaKnown RBP14.23□□□□□ -0.13
TPM1-217ENST00000559108 WDR63Q8IWG1 891 aa14.23□□□□□ -0.13
TPM1-217ENST00000559108 VSIG10Q8N0Z9 540 aa14.23□□□□□ -0.13
TPM1-217ENST00000559108 NBPF15Q8N660 670 aa14.23□□□□□ -0.13
TPM1-217ENST00000559108 TSPYL6Q8N831 410 aa14.23□□□□□ -0.13
TPM1-217ENST00000559108 C8orf58Q8NAV2 365 aa14.23□□□□□ -0.13
TPM1-217ENST00000559108 BABAM1Q9NWV8 329 aa14.23□□□□□ -0.13
TPM1-217ENST00000559108 SCN7AQ01118 1682 aa14.23□□□□□ -0.13
TPM1-217ENST00000559108 A1BGP04217 495 aa14.22□□□□□ -0.13
TPM1-217ENST00000559108 GNAI1P63096 354 aa14.22□□□□□ -0.13
TPM1-217ENST00000559108 GNPATO15228 680 aa14.21□□□□□ -0.13
TPM1-217ENST00000559108 SNRPA1P09661 255 aaKnown RBP14.21□□□□□ -0.13
TPM1-217ENST00000559108 STK32BQ9NY57 414 aa14.21□□□□□ -0.13
TPM1-217ENST00000559108 SOS1Q07889 1333 aaPredicted RBP14.2□□□□□ -0.14
TPM1-217ENST00000559108 ELL2O00472 640 aaPredicted RBP14.2□□□□□ -0.14
TPM1-217ENST00000559108 SLFN5Q08AF3 891 aa14.2□□□□□ -0.14
TPM1-217ENST00000559108 PROSER3Q2NL68 480 aa14.2□□□□□ -0.14
TPM1-217ENST00000559108 LRP10Q7Z4F1 713 aa14.2□□□□□ -0.14
TPM1-217ENST00000559108 COL23A1Q86Y22 540 aaPredicted RBP14.2□□□□□ -0.14
TPM1-217ENST00000559108 NGEFQ8N5V2 710 aa14.2□□□□□ -0.14
TPM1-217ENST00000559108 CCDC87Q9NVE4 849 aa14.2□□□□□ -0.14
TPM1-217ENST00000559108 PHF14O94880 888 aa14.19□□□□□ -0.14
TPM1-217ENST00000559108 ANXA1P04083 346 aa14.19□□□□□ -0.14
TPM1-217ENST00000559108 CALD1Q05682 793 aaKnown RBP14.19□□□□□ -0.14
TPM1-217ENST00000559108 PDIA6Q15084 440 aa14.19□□□□□ -0.14
TPM1-217ENST00000559108 RC3H1Q5TC82 1133 aaKnown RBP14.19□□□□□ -0.14
TPM1-217ENST00000559108 DUSP27Q5VZP5 1158 aa14.19□□□□□ -0.14
TPM1-217ENST00000559108 TRMT2AQ8IZ69 625 aaKnown RBP14.19□□□□□ -0.14
TPM1-217ENST00000559108 NECTIN2Q92692 538 aa14.19□□□□□ -0.14
TPM1-217ENST00000559108 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.18□□□□□ -0.14
TPM1-217ENST00000559108 CANXP27824 592 aaKnown RBP14.18□□□□□ -0.14
TPM1-217ENST00000559108 EXOSC9Q06265 439 aaKnown RBP14.18□□□□□ -0.14
TPM1-217ENST00000559108 GOLGA2Q08379 1002 aa14.18□□□□□ -0.14
TPM1-217ENST00000559108 AK7Q96M32 723 aa14.18□□□□□ -0.14
TPM1-217ENST00000559108 ZBED9Q6R2W3 1325 aa14.17□□□□□ -0.14
TPM1-217ENST00000559108 RPS6KA4O75676 772 aa14.17□□□□□ -0.14
TPM1-217ENST00000559108 TFCP2L1Q9NZI6 479 aa14.17□□□□□ -0.14
TPM1-217ENST00000559108 COL15A1P39059 1388 aa14.17□□□□□ -0.14
TPM1-217ENST00000559108 NUP98P52948 1817 aa14.16□□□□□ -0.14
TPM1-217ENST00000559108 EIF5P55010 431 aaKnown RBP14.16□□□□□ -0.14
TPM1-217ENST00000559108 ARHGEF1Q92888 912 aaKnown RBP14.16□□□□□ -0.14
TPM1-217ENST00000559108 SRP68Q9UHB9 627 aaKnown RBP14.16□□□□□ -0.14
TPM1-217ENST00000559108 ARFGEF2Q9Y6D5 1785 aa14.16□□□□□ -0.14
TPM1-217ENST00000559108 TCERG1O14776 1098 aaKnown RBP14.15□□□□□ -0.14
TPM1-217ENST00000559108 EIF2S2P20042 333 aaKnown RBP14.15□□□□□ -0.14
TPM1-217ENST00000559108 BCL2L12Q9HB09 334 aa14.15□□□□□ -0.14
TPM1-217ENST00000559108 ANKRD36CQ5JPF3 1778 aa14.14□□□□□ -0.15
TPM1-217ENST00000559108 AFDNP55196 1824 aaKnown RBP14.14□□□□□ -0.15
TPM1-217ENST00000559108 E9PSI1 815 aa14.14□□□□□ -0.15
TPM1-217ENST00000559108 VAMP4O75379 141 aa14.14□□□□□ -0.15
TPM1-217ENST00000559108 STARD3NLO95772 234 aa14.14□□□□□ -0.15
TPM1-217ENST00000559108 SSFA2P28290 1259 aa14.14□□□□□ -0.15
TPM1-217ENST00000559108 TEX13AQ9BXU3 409 aaPredicted RBP14.14□□□□□ -0.15
TPM1-217ENST00000559108 CHPF2Q9P2E5 772 aa14.14□□□□□ -0.15
TPM1-217ENST00000559108 RTCBQ9Y3I0 505 aaKnown RBP14.14□□□□□ -0.15
TPM1-217ENST00000559108 LRP5O75197 1615 aa14.13□□□□□ -0.15
TPM1-217ENST00000559108 ZBTB7AO95365 584 aa14.13□□□□□ -0.15
TPM1-217ENST00000559108 HOXB7P09629 217 aa14.13□□□□□ -0.15
TPM1-217ENST00000559108 TWISTNBQ3B726 338 aaPredicted RBP14.13□□□□□ -0.15
TPM1-217ENST00000559108 HDGFL1Q5TGJ6 251 aa14.13□□□□□ -0.15
TPM1-217ENST00000559108 TTLL7Q6ZT98 887 aa14.13□□□□□ -0.15
TPM1-217ENST00000559108 MYH16Q9H6N6 1097 aa14.13□□□□□ -0.15
TPM1-217ENST00000559108 USP42Q9H9J4 1324 aaKnown RBP14.13□□□□□ -0.15
TPM1-217ENST00000559108 CACNA1FO60840 1977 aa14.13□□□□□ -0.15
TPM1-217ENST00000559108 MYL6BP14649 208 aa14.12□□□□□ -0.15
TPM1-217ENST00000559108 IL6STP40189 918 aaPredicted RBP14.12□□□□□ -0.15
TPM1-217ENST00000559108 MSL1Q68DK7 614 aa14.12□□□□□ -0.15
TPM1-217ENST00000559108 YTHDC1Q96MU7 727 aaKnown RBP14.12□□□□□ -0.15
TPM1-217ENST00000559108 ZNF330Q9Y3S2 320 aaPredicted RBP14.12□□□□□ -0.15
TPM1-217ENST00000559108 GYS1P13807 737 aa14.11□□□□□ -0.15
TPM1-217ENST00000559108 PTGER2P43116 358 aa14.11□□□□□ -0.15
TPM1-217ENST00000559108 TRAPPC3LQ5T215 181 aa14.11□□□□□ -0.15
TPM1-217ENST00000559108 G2E3Q7L622 706 aa14.11□□□□□ -0.15
TPM1-217ENST00000559108 SGIP1Q9BQI5 828 aa14.11□□□□□ -0.15
TPM1-217ENST00000559108 NRXN2Q9P2S2 1712 aa14.11□□□□□ -0.15
TPM1-217ENST00000559108 TBC1D2BQ9UPU7 963 aa14.11□□□□□ -0.15
TPM1-217ENST00000559108 KIAA1551Q9HCM1 1747 aa14.1□□□□□ -0.15
TPM1-217ENST00000559108 CAMTA2O94983 1202 aa14.1□□□□□ -0.15
TPM1-217ENST00000559108 FKBP8Q14318 412 aa14.1□□□□□ -0.15
TPM1-217ENST00000559108 USPL1Q5W0Q7 1092 aa14.1□□□□□ -0.15
TPM1-217ENST00000559108 PHAXQ9H814 394 aaKnown RBP14.1□□□□□ -0.15
TPM1-217ENST00000559108 ATF5Q9Y2D1 282 aaPredicted RBP14.1□□□□□ -0.15
TPM1-217ENST00000559108 ERBB4Q15303 1308 aa14.1□□□□□ -0.15
TPM1-217ENST00000559108 ADRA2BP18089 450 aa14.09□□□□□ -0.15
TPM1-217ENST00000559108 HLFQ16534 295 aa14.09□□□□□ -0.15
TPM1-217ENST00000559108 DDX21Q9NR30 783 aaKnown RBP eCLIP14.09□□□□□ -0.15
TPM1-217ENST00000559108 NARFQ9UHQ1 456 aa14.09□□□□□ -0.15
TPM1-217ENST00000559108 MSH5O43196 834 aa14.08□□□□□ -0.16
TPM1-217ENST00000559108 XAGE3Q8WTP9 111 aa14.08□□□□□ -0.16
TPM1-217ENST00000559108 ANKRD31Q8N7Z5 1873 aa14.08□□□□□ -0.16
TPM1-217ENST00000559108 KIF13BQ9NQT8 1826 aa14.07□□□□□ -0.16
TPM1-217ENST00000559108 RFC4P35249 363 aa14.07□□□□□ -0.16
TPM1-217ENST00000559108 DDR1Q08345 913 aa14.07□□□□□ -0.16
TPM1-217ENST00000559108 COPS6Q7L5N1 327 aa14.07□□□□□ -0.16
TPM1-217ENST00000559108 DZIP3Q86Y13 1208 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms