RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 ITSN1Q15811 1721 aa8.04□□□□□ -1.12
LRRC28-208ENST00000558771 NUDT16Q96DE0 195 aaKnown RBP8.04□□□□□ -1.12
LRRC28-208ENST00000558771 PHOX2BQ99453 314 aa8.04□□□□□ -1.12
LRRC28-208ENST00000558771 NRKQ7Z2Y5 1582 aa8.04□□□□□ -1.12
LRRC28-208ENST00000558771 PARP4Q9UKK3 1724 aaKnown RBP8.03□□□□□ -1.12
LRRC28-208ENST00000558771 CASZ1Q86V15 1759 aa8.03□□□□□ -1.12
LRRC28-208ENST00000558771 LMO7Q8WWI1 1683 aa8.03□□□□□ -1.12
LRRC28-208ENST00000558771 ZMYND10O75800 440 aa8.03□□□□□ -1.12
LRRC28-208ENST00000558771 ZNF784Q8NCA9 323 aaPredicted RBP8.03□□□□□ -1.12
LRRC28-208ENST00000558771 DAXXQ9UER7 740 aaPredicted RBP8.03□□□□□ -1.12
LRRC28-208ENST00000558771 THRAP3Q9Y2W1 955 aaKnown RBP8.03□□□□□ -1.12
LRRC28-208ENST00000558771 RGPD3A6NKT7 1758 aaPredicted RBP8.02□□□□□ -1.13
LRRC28-208ENST00000558771 RGPD4Q7Z3J3 1758 aa8.02□□□□□ -1.13
LRRC28-208ENST00000558771 PLSCR1O15162 318 aa8.02□□□□□ -1.13
LRRC28-208ENST00000558771 APLP1P51693 650 aa8.02□□□□□ -1.13
LRRC28-208ENST00000558771 KRI1Q8N9T8 703 aaKnown RBP8.02□□□□□ -1.13
LRRC28-208ENST00000558771 NLRP7Q8WX94 980 aa8.02□□□□□ -1.13
LRRC28-208ENST00000558771 PDGFDQ9GZP0 370 aaPredicted RBP8.02□□□□□ -1.13
LRRC28-208ENST00000558771 PEAK1Q9H792 1746 aa8.02□□□□□ -1.13
LRRC28-208ENST00000558771 OVOS2A0A0G2JMS6 1433 aa8.02□□□□□ -1.13
LRRC28-208ENST00000558771 OVOS2A0A0J9YW53 1432 aa8.02□□□□□ -1.13
LRRC28-208ENST00000558771 OVOS2Q6IE36 1432 aa8.02□□□□□ -1.13
LRRC28-208ENST00000558771 ACEP12821 1306 aa8.02□□□□□ -1.13
LRRC28-208ENST00000558771 MYOM1P52179 1685 aa8.02□□□□□ -1.13
LRRC28-208ENST00000558771 SBF2Q86WG5 1849 aa8.01□□□□□ -1.13
LRRC28-208ENST00000558771 ARHGEF28Q8N1W1 1705 aaKnown RBP8.01□□□□□ -1.13
LRRC28-208ENST00000558771 POLR3AO14802 1390 aaPredicted RBP8.01□□□□□ -1.13
LRRC28-208ENST00000558771 CPDO75976 1380 aa8.01□□□□□ -1.13
LRRC28-208ENST00000558771 C11orf95C9JLR9 678 aaPredicted RBP8.01□□□□□ -1.13
LRRC28-208ENST00000558771 ZBTB7AO95365 584 aa8.01□□□□□ -1.13
LRRC28-208ENST00000558771 USP19O94966 1318 aa8.01□□□□□ -1.13
LRRC28-208ENST00000558771 COL5A2P05997 1499 aaPredicted RBP8□□□□□ -1.13
LRRC28-208ENST00000558771 TOPAZ1Q8N9V7 1692 aa8□□□□□ -1.13
LRRC28-208ENST00000558771 SENP3-EIF4A1A0A087X0R7 540 aa8□□□□□ -1.13
LRRC28-208ENST00000558771 ITGBL1O95965 494 aaPredicted RBP8□□□□□ -1.13
LRRC28-208ENST00000558771 SLC10A3P09131 477 aa8□□□□□ -1.13
LRRC28-208ENST00000558771 IFFO2Q5TF58 517 aa8□□□□□ -1.13
LRRC28-208ENST00000558771 PTF1AQ7RTS3 328 aa8□□□□□ -1.13
LRRC28-208ENST00000558771 ABTB2Q8N961 1025 aa8□□□□□ -1.13
LRRC28-208ENST00000558771 CCDC102AQ96A19 550 aa8□□□□□ -1.13
LRRC28-208ENST00000558771 CDK19Q9BWU1 502 aa8□□□□□ -1.13
LRRC28-208ENST00000558771 LRRC37A3O60309 1634 aa8□□□□□ -1.13
LRRC28-208ENST00000558771 PLEKHG3A1L390 1219 aa7.99□□□□□ -1.13
LRRC28-208ENST00000558771 GCP02774 474 aa7.99□□□□□ -1.13
LRRC28-208ENST00000558771 CRB1P82279 1406 aa7.99□□□□□ -1.13
LRRC28-208ENST00000558771 DCAF11Q8TEB1 546 aa7.99□□□□□ -1.13
LRRC28-208ENST00000558771 CHD4Q14839 1912 aa7.98□□□□□ -1.13
LRRC28-208ENST00000558771 C1QTNF8P60827 252 aa7.98□□□□□ -1.13
LRRC28-208ENST00000558771 KCNC4Q03721 635 aa7.98□□□□□ -1.13
LRRC28-208ENST00000558771 DDB1Q16531 1140 aa7.98□□□□□ -1.13
LRRC28-208ENST00000558771 TJAP1Q5JTD0 557 aa7.98□□□□□ -1.13
LRRC28-208ENST00000558771 NLRP13Q86W25 1043 aa7.98□□□□□ -1.13
LRRC28-208ENST00000558771 SYT17Q9BSW7 474 aa7.98□□□□□ -1.13
LRRC28-208ENST00000558771 FHDC1Q9C0D6 1143 aaPredicted RBP7.98□□□□□ -1.13
LRRC28-208ENST00000558771 CEP350Q5VT06 3117 aa7.97□□□□□ -1.13
LRRC28-208ENST00000558771 ZBTB7CA1YPR0 619 aa7.97□□□□□ -1.13
LRRC28-208ENST00000558771 MARCH10Q8NA82 808 aaPredicted RBP7.97□□□□□ -1.13
LRRC28-208ENST00000558771 PRR14Q9BWN1 585 aa7.97□□□□□ -1.13
LRRC28-208ENST00000558771 STK32BQ9NY57 414 aa7.97□□□□□ -1.13
LRRC28-208ENST00000558771 GOLGB1Q14789 3259 aaKnown RBP7.97□□□□□ -1.13
LRRC28-208ENST00000558771 WNK3Q9BYP7 1800 aa7.96□□□□□ -1.13
LRRC28-208ENST00000558771 DDX11L8A8MPP1 907 aa7.96□□□□□ -1.14
LRRC28-208ENST00000558771 CFHP08603 1231 aa7.96□□□□□ -1.14
LRRC28-208ENST00000558771 SLC15A2Q16348 729 aa7.96□□□□□ -1.14
LRRC28-208ENST00000558771 TXNRD1Q16881 649 aa7.96□□□□□ -1.14
LRRC28-208ENST00000558771 KMT5BQ4FZB7 885 aa7.96□□□□□ -1.14
LRRC28-208ENST00000558771 TOM1L2Q6ZVM7 507 aa7.96□□□□□ -1.14
LRRC28-208ENST00000558771 MTRQ99707 1265 aa7.96□□□□□ -1.14
LRRC28-208ENST00000558771 IL21Q9HBE4 155 aa7.96□□□□□ -1.14
LRRC28-208ENST00000558771 AKAP12Q02952 1782 aa7.96□□□□□ -1.14
LRRC28-208ENST00000558771 AATKQ6ZMQ8 1374 aa7.96□□□□□ -1.14
LRRC28-208ENST00000558771 BCL9O00512 1426 aa7.95□□□□□ -1.14
LRRC28-208ENST00000558771 ACTN4O43707 911 aaKnown RBP7.95□□□□□ -1.14
LRRC28-208ENST00000558771 MDM2Q00987 491 aaPredicted RBP7.95□□□□□ -1.14
LRRC28-208ENST00000558771 RDH13Q8NBN7 331 aa7.95□□□□□ -1.14
LRRC28-208ENST00000558771 MTFR1LQ9H019 292 aa7.95□□□□□ -1.14
LRRC28-208ENST00000558771 PPIP5K1Q6PFW1 1433 aa7.95□□□□□ -1.14
LRRC28-208ENST00000558771 COL18A1P39060 1754 aa7.94□□□□□ -1.14
LRRC28-208ENST00000558771 SLIT3O75094 1523 aa7.94□□□□□ -1.14
LRRC28-208ENST00000558771 SULF1Q8IWU6 871 aa7.94□□□□□ -1.14
LRRC28-208ENST00000558771 ZNF516Q92618 1163 aa7.94□□□□□ -1.14
LRRC28-208ENST00000558771 PCDHB3Q9Y5E6 796 aa7.94□□□□□ -1.14
LRRC28-208ENST00000558771 WDR17Q8IZU2 1322 aa7.94□□□□□ -1.14
LRRC28-208ENST00000558771 COPS2P61201 443 aa7.93□□□□□ -1.14
LRRC28-208ENST00000558771 SRPK2P78362 688 aaKnown RBP7.93□□□□□ -1.14
LRRC28-208ENST00000558771 ARXQ96QS3 562 aa7.93□□□□□ -1.14
LRRC28-208ENST00000558771 CDCA7Q9BWT1 371 aaPredicted RBP7.93□□□□□ -1.14
LRRC28-208ENST00000558771 BRD4O60885 1362 aaPredicted RBP7.93□□□□□ -1.14
LRRC28-208ENST00000558771 RAB3GAP2Q9H2M9 1393 aa7.93□□□□□ -1.14
LRRC28-208ENST00000558771 GCGRP47871 477 aa7.92□□□□□ -1.14
LRRC28-208ENST00000558771 TMUB1Q9BVT8 246 aa7.92□□□□□ -1.14
LRRC28-208ENST00000558771 MAP3K5Q99683 1374 aa7.92□□□□□ -1.14
LRRC28-208ENST00000558771 USP6P35125 1406 aa7.92□□□□□ -1.14
LRRC28-208ENST00000558771 CPSF1Q10570 1443 aaKnown RBP7.92□□□□□ -1.14
LRRC28-208ENST00000558771 RGPD5Q99666 1765 aa7.92□□□□□ -1.14
LRRC28-208ENST00000558771 EXOC5O00471 708 aa7.91□□□□□ -1.14
LRRC28-208ENST00000558771 GIGYF1O75420 1035 aaPredicted RBP7.91□□□□□ -1.14
LRRC28-208ENST00000558771 CSB-PGBD3P0DP91 1061 aa7.91□□□□□ -1.14
LRRC28-208ENST00000558771 CLCN1P35523 988 aa7.91□□□□□ -1.14
LRRC28-208ENST00000558771 GPR162Q16538 588 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms