RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 MYT1Q01538 1121 aa16.07■□□□□ 0.16
HMGB1P8-201ENST00000558211 POTEGQ6S5H5 508 aa16.07■□□□□ 0.16
HMGB1P8-201ENST00000558211 POTEMA6NI47 508 aa16.06■□□□□ 0.16
HMGB1P8-201ENST00000558211 RXRBP28702 533 aa16.06■□□□□ 0.16
HMGB1P8-201ENST00000558211 RBM6P78332 1123 aaKnown RBP16.06■□□□□ 0.16
HMGB1P8-201ENST00000558211 FAM98CQ17RN3 349 aaKnown RBP16.06■□□□□ 0.16
HMGB1P8-201ENST00000558211 CCDC184Q52MB2 194 aa16.06■□□□□ 0.16
HMGB1P8-201ENST00000558211 TCP11L2Q8N4U5 519 aa16.06■□□□□ 0.16
HMGB1P8-201ENST00000558211 NUDCQ9Y266 331 aa16.06■□□□□ 0.16
HMGB1P8-201ENST00000558211 FAM208AQ9UK61 1670 aaKnown RBP16.05■□□□□ 0.16
HMGB1P8-201ENST00000558211 COL3A1P02461 1466 aaPredicted RBP16.05■□□□□ 0.16
HMGB1P8-201ENST00000558211 EN1Q05925 392 aaPredicted RBP16.05■□□□□ 0.16
HMGB1P8-201ENST00000558211 SMYD5Q6GMV2 418 aa16.05■□□□□ 0.16
HMGB1P8-201ENST00000558211 ZNF687Q8N1G0 1237 aa16.05■□□□□ 0.16
HMGB1P8-201ENST00000558211 ADAM33Q9BZ11 813 aa16.05■□□□□ 0.16
HMGB1P8-201ENST00000558211 HMOX1P09601 288 aa16.04■□□□□ 0.16
HMGB1P8-201ENST00000558211 SULT6B1Q6IMI4 303 aa16.04■□□□□ 0.16
HMGB1P8-201ENST00000558211 BCL2L12Q9HB09 334 aa16.04■□□□□ 0.16
HMGB1P8-201ENST00000558211 MRS2Q9HD23 443 aa16.04■□□□□ 0.16
HMGB1P8-201ENST00000558211 GLI3P10071 1580 aa16.04■□□□□ 0.16
HMGB1P8-201ENST00000558211 U2AF1L5P0DN76 240 aaPredicted RBP16.03■□□□□ 0.16
HMGB1P8-201ENST00000558211 U2AF1Q01081 240 aaKnown RBP eCLIP16.03■□□□□ 0.16
HMGB1P8-201ENST00000558211 AEBP1Q8IUX7 1158 aa16.03■□□□□ 0.16
HMGB1P8-201ENST00000558211 IGSF1Q8N6C5 1336 aa16.02■□□□□ 0.16
HMGB1P8-201ENST00000558211 POTEEQ6S8J3 1075 aa16.02■□□□□ 0.16
HMGB1P8-201ENST00000558211 THRAP3Q9Y2W1 955 aaKnown RBP16.02■□□□□ 0.16
HMGB1P8-201ENST00000558211 IL2RBP14784 551 aa16.01■□□□□ 0.15
HMGB1P8-201ENST00000558211 RAPGEF4Q8WZA2 1011 aa16.01■□□□□ 0.15
HMGB1P8-201ENST00000558211 TATP17735 454 aaPredicted RBP16■□□□□ 0.15
HMGB1P8-201ENST00000558211 WDR43Q15061 677 aaKnown RBP eCLIP16■□□□□ 0.15
HMGB1P8-201ENST00000558211 BARGINQ6ZT62 677 aa16■□□□□ 0.15
HMGB1P8-201ENST00000558211 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16■□□□□ 0.15
HMGB1P8-201ENST00000558211 SEPT12Q8IYM1 358 aa16■□□□□ 0.15
HMGB1P8-201ENST00000558211 RGPD1P0DJD0 1748 aa15.99■□□□□ 0.15
HMGB1P8-201ENST00000558211 WNK3Q9BYP7 1800 aa15.97■□□□□ 0.15
HMGB1P8-201ENST00000558211 EXOC5O00471 708 aa15.97■□□□□ 0.15
HMGB1P8-201ENST00000558211 RBM26Q5T8P6 1007 aaKnown RBP15.97■□□□□ 0.15
HMGB1P8-201ENST00000558211 CDCA7Q9BWT1 371 aaPredicted RBP15.97■□□□□ 0.15
HMGB1P8-201ENST00000558211 MEGF6O75095 1541 aa15.97■□□□□ 0.15
HMGB1P8-201ENST00000558211 ONECUT3O60422 494 aaPredicted RBP15.96■□□□□ 0.15
HMGB1P8-201ENST00000558211 DDB1Q16531 1140 aa15.96■□□□□ 0.15
HMGB1P8-201ENST00000558211 C6orf132Q5T0Z8 1188 aa15.96■□□□□ 0.15
HMGB1P8-201ENST00000558211 DISP2A7MBM2 1401 aa15.95■□□□□ 0.14
HMGB1P8-201ENST00000558211 MAP3K7O43318 606 aa15.95■□□□□ 0.14
HMGB1P8-201ENST00000558211 PRKAR2BP31323 418 aa15.95■□□□□ 0.14
HMGB1P8-201ENST00000558211 PDE3BQ13370 1112 aa15.95■□□□□ 0.14
HMGB1P8-201ENST00000558211 TSR1Q2NL82 804 aaKnown RBP15.95■□□□□ 0.14
HMGB1P8-201ENST00000558211 FAM9BQ8IZU0 186 aa15.95■□□□□ 0.14
HMGB1P8-201ENST00000558211 ADAMTS8Q9UP79 889 aa15.95■□□□□ 0.14
HMGB1P8-201ENST00000558211 NCAPD2Q15021 1401 aa15.94■□□□□ 0.14
HMGB1P8-201ENST00000558211 CCER2I3L3R5 266 aa15.94■□□□□ 0.14
HMGB1P8-201ENST00000558211 PBX2P40425 430 aa15.94■□□□□ 0.14
HMGB1P8-201ENST00000558211 ZCRB1Q8TBF4 217 aaKnown RBP15.94■□□□□ 0.14
HMGB1P8-201ENST00000558211 DDX54Q8TDD1 881 aaKnown RBP15.94■□□□□ 0.14
HMGB1P8-201ENST00000558211 RSPH6AQ9H0K4 717 aa15.94■□□□□ 0.14
HMGB1P8-201ENST00000558211 BRWD3Q6RI45 1802 aa15.94■□□□□ 0.14
HMGB1P8-201ENST00000558211 PARP4Q9UKK3 1724 aaKnown RBP15.94■□□□□ 0.14
HMGB1P8-201ENST00000558211 RGS12O14924 1447 aa15.94■□□□□ 0.14
HMGB1P8-201ENST00000558211 THSD7AQ9UPZ6 1657 aa15.93■□□□□ 0.14
HMGB1P8-201ENST00000558211 KDRP35968 1356 aa15.93■□□□□ 0.14
HMGB1P8-201ENST00000558211 TULP1O00294 542 aaPredicted RBP15.93■□□□□ 0.14
HMGB1P8-201ENST00000558211 FCHSD2O94868 740 aa15.93■□□□□ 0.14
HMGB1P8-201ENST00000558211 PLEKHO1Q53GL0 409 aaPredicted RBP15.93■□□□□ 0.14
HMGB1P8-201ENST00000558211 FAM182BQ5T319 152 aa15.93■□□□□ 0.14
HMGB1P8-201ENST00000558211 CCDC146Q8IYE0 955 aa15.93■□□□□ 0.14
HMGB1P8-201ENST00000558211 PNISRQ8TF01 805 aaKnown RBP15.93■□□□□ 0.14
HMGB1P8-201ENST00000558211 ARHGAP33O14559 1287 aa15.92■□□□□ 0.14
HMGB1P8-201ENST00000558211 NEFMP07197 916 aa15.92■□□□□ 0.14
HMGB1P8-201ENST00000558211 PTPREP23469 700 aa15.92■□□□□ 0.14
HMGB1P8-201ENST00000558211 SPG7Q9UQ90 795 aa15.92■□□□□ 0.14
HMGB1P8-201ENST00000558211 OVOS2A0A0G2JMS6 1433 aa15.92■□□□□ 0.14
HMGB1P8-201ENST00000558211 LRRC37A3O60309 1634 aa15.91■□□□□ 0.14
HMGB1P8-201ENST00000558211 KRT27Q7Z3Y8 459 aa15.91■□□□□ 0.14
HMGB1P8-201ENST00000558211 PHACTR3Q96KR7 559 aa15.91■□□□□ 0.14
HMGB1P8-201ENST00000558211 PNNQ9H307 717 aaKnown RBP15.91■□□□□ 0.14
HMGB1P8-201ENST00000558211 CDHR5Q9HBB8 845 aa15.91■□□□□ 0.14
HMGB1P8-201ENST00000558211 KAT6BQ8WYB5 2073 aa15.91■□□□□ 0.14
HMGB1P8-201ENST00000558211 ZNF530Q6P9A1 599 aaPredicted RBP15.9■□□□□ 0.14
HMGB1P8-201ENST00000558211 MAPK8IP3Q9UPT6 1336 aa15.9■□□□□ 0.14
HMGB1P8-201ENST00000558211 TNS2Q63HR2 1409 aa15.89■□□□□ 0.13
HMGB1P8-201ENST00000558211 SENP3-EIF4A1A0A087X0R7 540 aa15.89■□□□□ 0.13
HMGB1P8-201ENST00000558211 PSEN2P49810 448 aa15.89■□□□□ 0.13
HMGB1P8-201ENST00000558211 MTHFSDQ2M296 383 aaKnown RBP15.89■□□□□ 0.13
HMGB1P8-201ENST00000558211 AMOTQ4VCS5 1084 aa15.89■□□□□ 0.13
HMGB1P8-201ENST00000558211 MARCH10Q8NA82 808 aaPredicted RBP15.89■□□□□ 0.13
HMGB1P8-201ENST00000558211 KCNK17Q96T54 332 aa15.89■□□□□ 0.13
HMGB1P8-201ENST00000558211 NPDC1Q9NQX5 325 aaPredicted RBP15.89■□□□□ 0.13
HMGB1P8-201ENST00000558211 COL9A1P20849 921 aa15.88■□□□□ 0.13
HMGB1P8-201ENST00000558211 PLEKHF1Q96S99 279 aa15.88■□□□□ 0.13
HMGB1P8-201ENST00000558211 KRTAP3-3Q9BYR6 98 aa15.88■□□□□ 0.13
HMGB1P8-201ENST00000558211 KRTAP3-2Q9BYR7 98 aa15.88■□□□□ 0.13
HMGB1P8-201ENST00000558211 PCDH11XQ9BZA7 1347 aa15.88■□□□□ 0.13
HMGB1P8-201ENST00000558211 PCDH11YQ9BZA8 1340 aa15.88■□□□□ 0.13
HMGB1P8-201ENST00000558211 CYP27B1O15528 508 aa15.87■□□□□ 0.13
HMGB1P8-201ENST00000558211 C1orf141Q5JVX7 400 aa15.87■□□□□ 0.13
HMGB1P8-201ENST00000558211 ILDR2Q71H61 639 aa15.87■□□□□ 0.13
HMGB1P8-201ENST00000558211 CDAN1Q8IWY9 1227 aa15.87■□□□□ 0.13
HMGB1P8-201ENST00000558211 IFNL2Q8IZJ0 200 aa15.87■□□□□ 0.13
HMGB1P8-201ENST00000558211 RUNDC1Q96C34 613 aa15.87■□□□□ 0.13
HMGB1P8-201ENST00000558211 PKD1L3Q7Z443 1732 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms