RNA–Protein interactions for RNA: ENST00000557488.1

ITGA7-219, Transcript of integrin subunit alpha 7, humanhuman

TSL 3

Gene ITGA7, Length 296 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-219ENST00000557488 CCER2I3L3R5 266 aa18.96■□□□□ 0.63
ITGA7-219ENST00000557488 CANXP27824 592 aaKnown RBP18.96■□□□□ 0.63
ITGA7-219ENST00000557488 CCDC87Q9NVE4 849 aa18.96■□□□□ 0.63
ITGA7-219ENST00000557488 TSPYL4Q9UJ04 414 aa18.96■□□□□ 0.63
ITGA7-219ENST00000557488 RTCBQ9Y3I0 505 aaKnown RBP18.96■□□□□ 0.63
ITGA7-219ENST00000557488 ZNF853P0CG23 659 aa18.95■□□□□ 0.62
ITGA7-219ENST00000557488 LMOD3Q0VAK6 560 aa18.95■□□□□ 0.62
ITGA7-219ENST00000557488 SPON1Q9HCB6 807 aa18.95■□□□□ 0.62
ITGA7-219ENST00000557488 SRP68Q9UHB9 627 aaKnown RBP18.95■□□□□ 0.62
ITGA7-219ENST00000557488 GIGYF1O75420 1035 aaPredicted RBP18.94■□□□□ 0.62
ITGA7-219ENST00000557488 SNRPA1P09661 255 aaKnown RBP18.94■□□□□ 0.62
ITGA7-219ENST00000557488 SSFA2P28290 1259 aa18.94■□□□□ 0.62
ITGA7-219ENST00000557488 TRAPPC3LQ5T215 181 aa18.94■□□□□ 0.62
ITGA7-219ENST00000557488 WWC1Q8IX03 1113 aa18.94■□□□□ 0.62
ITGA7-219ENST00000557488 MTFR1LQ9H019 292 aa18.94■□□□□ 0.62
ITGA7-219ENST00000557488 COL24A1Q17RW2 1714 aa18.94■□□□□ 0.62
ITGA7-219ENST00000557488 NBPF26B4DH59 902 aa18.93■□□□□ 0.62
ITGA7-219ENST00000557488 NBPF10Q6P3W6 841 aaKnown RBP18.93■□□□□ 0.62
ITGA7-219ENST00000557488 NBPF15Q8N660 670 aa18.93■□□□□ 0.62
ITGA7-219ENST00000557488 SOS1Q07889 1333 aaPredicted RBP18.93■□□□□ 0.62
ITGA7-219ENST00000557488 C4AP0C0L4 1744 aa18.92■□□□□ 0.62
ITGA7-219ENST00000557488 SLC16A10Q8TF71 515 aa18.92■□□□□ 0.62
ITGA7-219ENST00000557488 MBIPQ9NS73 344 aa18.92■□□□□ 0.62
ITGA7-219ENST00000557488 LRP5O75197 1615 aa18.92■□□□□ 0.62
ITGA7-219ENST00000557488 EIF5P55010 431 aaKnown RBP18.91■□□□□ 0.62
ITGA7-219ENST00000557488 FLAD1Q8NFF5 587 aa18.91■□□□□ 0.62
ITGA7-219ENST00000557488 SPINK5Q9NQ38 1064 aaPredicted RBP18.91■□□□□ 0.62
ITGA7-219ENST00000557488 STARD3NLO95772 234 aa18.9■□□□□ 0.62
ITGA7-219ENST00000557488 CFAP44Q96MT7 982 aa18.9■□□□□ 0.62
ITGA7-219ENST00000557488 TEX13AQ9BXU3 409 aaPredicted RBP18.9■□□□□ 0.62
ITGA7-219ENST00000557488 BCL2L12Q9HB09 334 aa18.9■□□□□ 0.62
ITGA7-219ENST00000557488 GYS1P13807 737 aa18.89■□□□□ 0.61
ITGA7-219ENST00000557488 CCDC27Q2M243 656 aa18.89■□□□□ 0.61
ITGA7-219ENST00000557488 BABAM1Q9NWV8 329 aa18.89■□□□□ 0.61
ITGA7-219ENST00000557488 RFC4P35249 363 aa18.88■□□□□ 0.61
ITGA7-219ENST00000557488 NECTIN2Q92692 538 aa18.88■□□□□ 0.61
ITGA7-219ENST00000557488 TSR2Q969E8 191 aaKnown RBP18.88■□□□□ 0.61
ITGA7-219ENST00000557488 TBC1D2BQ9UPU7 963 aa18.88■□□□□ 0.61
ITGA7-219ENST00000557488 ELL2O00472 640 aaPredicted RBP18.87■□□□□ 0.61
ITGA7-219ENST00000557488 ANXA1P04083 346 aa18.87■□□□□ 0.61
ITGA7-219ENST00000557488 EIF2S2P20042 333 aaKnown RBP18.87■□□□□ 0.61
ITGA7-219ENST00000557488 FKBP8Q14318 412 aa18.87■□□□□ 0.61
ITGA7-219ENST00000557488 USPL1Q5W0Q7 1092 aa18.87■□□□□ 0.61
ITGA7-219ENST00000557488 C8orf58Q8NAV2 365 aa18.87■□□□□ 0.61
ITGA7-219ENST00000557488 ZNF330Q9Y3S2 320 aaPredicted RBP18.87■□□□□ 0.61
ITGA7-219ENST00000557488 HMGB2P26583 209 aaKnown RBP18.86■□□□□ 0.61
ITGA7-219ENST00000557488 PDIA6Q15084 440 aa18.86■□□□□ 0.61
ITGA7-219ENST00000557488 NGEFQ8N5V2 710 aa18.86■□□□□ 0.61
ITGA7-219ENST00000557488 IFT57Q9NWB7 429 aa18.86■□□□□ 0.61
ITGA7-219ENST00000557488 COL15A1P39059 1388 aa18.85■□□□□ 0.61
ITGA7-219ENST00000557488 USP42Q9H9J4 1324 aaKnown RBP18.85■□□□□ 0.61
ITGA7-219ENST00000557488 ADRA2BP18089 450 aa18.85■□□□□ 0.61
ITGA7-219ENST00000557488 PROSER3Q2NL68 480 aa18.85■□□□□ 0.61
ITGA7-219ENST00000557488 TSPYL6Q8N831 410 aa18.85■□□□□ 0.61
ITGA7-219ENST00000557488 LAMB4A4D0S4 1761 aa18.85■□□□□ 0.61
ITGA7-219ENST00000557488 IL6STP40189 918 aaPredicted RBP18.84■□□□□ 0.61
ITGA7-219ENST00000557488 GNAI1P63096 354 aa18.84■□□□□ 0.61
ITGA7-219ENST00000557488 LRP10Q7Z4F1 713 aa18.84■□□□□ 0.61
ITGA7-219ENST00000557488 ARXQ96QS3 562 aa18.84■□□□□ 0.61
ITGA7-219ENST00000557488 NARFQ9UHQ1 456 aa18.84■□□□□ 0.61
ITGA7-219ENST00000557488 ZNF521Q96K83 1311 aa18.83■□□□□ 0.61
ITGA7-219ENST00000557488 MYL6BP14649 208 aa18.83■□□□□ 0.6
ITGA7-219ENST00000557488 NCBP3Q53F19 620 aaKnown RBP18.83■□□□□ 0.6
ITGA7-219ENST00000557488 DUSP27Q5VZP5 1158 aa18.83■□□□□ 0.6
ITGA7-219ENST00000557488 MMP10P09238 476 aa18.82■□□□□ 0.6
ITGA7-219ENST00000557488 TM4SF1P30408 202 aa18.82■□□□□ 0.6
ITGA7-219ENST00000557488 TTLL7Q6ZT98 887 aa18.82■□□□□ 0.6
ITGA7-219ENST00000557488 FHDC1Q9C0D6 1143 aaPredicted RBP18.82■□□□□ 0.6
ITGA7-219ENST00000557488 PPP1R1BQ9UD71 204 aaPredicted RBP18.82■□□□□ 0.6
ITGA7-219ENST00000557488 CAMTA2O94983 1202 aa18.81■□□□□ 0.6
ITGA7-219ENST00000557488 DDR1Q08345 913 aa18.81■□□□□ 0.6
ITGA7-219ENST00000557488 WDR63Q8IWG1 891 aa18.81■□□□□ 0.6
ITGA7-219ENST00000557488 ZPR1O75312 459 aa18.8■□□□□ 0.6
ITGA7-219ENST00000557488 HLFQ16534 295 aa18.8■□□□□ 0.6
ITGA7-219ENST00000557488 DZIP3Q86Y13 1208 aaKnown RBP18.8■□□□□ 0.6
ITGA7-219ENST00000557488 NLGN1Q8N2Q7 840 aa18.8■□□□□ 0.6
ITGA7-219ENST00000557488 SYT17Q9BSW7 474 aa18.8■□□□□ 0.6
ITGA7-219ENST00000557488 SRCAPQ6ZRS2 3230 aa18.79■□□□□ 0.6
ITGA7-219ENST00000557488 TCERG1O14776 1098 aaKnown RBP18.79■□□□□ 0.6
ITGA7-219ENST00000557488 POLD1P28340 1107 aa18.79■□□□□ 0.6
ITGA7-219ENST00000557488 CALD1Q05682 793 aaKnown RBP18.79■□□□□ 0.6
ITGA7-219ENST00000557488 NFIXQ14938 502 aa18.79■□□□□ 0.6
ITGA7-219ENST00000557488 TBC1D9BQ66K14 1250 aa18.79■□□□□ 0.6
ITGA7-219ENST00000557488 KLHL34Q8N239 644 aa18.79■□□□□ 0.6
ITGA7-219ENST00000557488 CDCA7LQ96GN5 454 aa18.79■□□□□ 0.6
ITGA7-219ENST00000557488 IL16Q14005 1332 aa18.78■□□□□ 0.6
ITGA7-219ENST00000557488 BICDL1Q6ZP65 573 aa18.78■□□□□ 0.6
ITGA7-219ENST00000557488 NLGN2Q8NFZ4 835 aa18.78■□□□□ 0.6
ITGA7-219ENST00000557488 A0A087WZG4 1122 aa18.77■□□□□ 0.6
ITGA7-219ENST00000557488 CHPF2Q9P2E5 772 aa18.77■□□□□ 0.6
ITGA7-219ENST00000557488 AFDNP55196 1824 aaKnown RBP18.77■□□□□ 0.59
ITGA7-219ENST00000557488 FANCIQ9NVI1 1328 aa18.76■□□□□ 0.59
ITGA7-219ENST00000557488 POLRMTO00411 1230 aaKnown RBP18.76■□□□□ 0.59
ITGA7-219ENST00000557488 EXOSC9Q06265 439 aaKnown RBP18.76■□□□□ 0.59
ITGA7-219ENST00000557488 NUP98P52948 1817 aa18.75■□□□□ 0.59
ITGA7-219ENST00000557488 HDGFL1Q5TGJ6 251 aa18.75■□□□□ 0.59
ITGA7-219ENST00000557488 CCDC24Q8N4L8 307 aa18.75■□□□□ 0.59
ITGA7-219ENST00000557488 BCORQ6W2J9 1755 aa18.75■□□□□ 0.59
ITGA7-219ENST00000557488 AIMP1Q12904 312 aaKnown RBP18.74■□□□□ 0.59
ITGA7-219ENST00000557488 COPS6Q7L5N1 327 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms