RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 COL5A3P25940 1745 aaPredicted RBP14.13□□□□□ -0.15
GABRB3-211ENST00000556636 COL24A1Q17RW2 1714 aa14.13□□□□□ -0.15
GABRB3-211ENST00000556636 CICQ96RK0 1608 aaPredicted RBP14.13□□□□□ -0.15
GABRB3-211ENST00000556636 STARD3NLO95772 234 aa14.13□□□□□ -0.15
GABRB3-211ENST00000556636 GYS1P13807 737 aa14.13□□□□□ -0.15
GABRB3-211ENST00000556636 RFC4P35249 363 aa14.13□□□□□ -0.15
GABRB3-211ENST00000556636 EIF5P55010 431 aaKnown RBP14.13□□□□□ -0.15
GABRB3-211ENST00000556636 NEUROD2Q15784 382 aa14.13□□□□□ -0.15
GABRB3-211ENST00000556636 APAF1O14727 1248 aa14.12□□□□□ -0.15
GABRB3-211ENST00000556636 A1BGP04217 495 aa14.12□□□□□ -0.15
GABRB3-211ENST00000556636 SNRPA1P09661 255 aaKnown RBP14.12□□□□□ -0.15
GABRB3-211ENST00000556636 EIF4A1P60842 406 aaKnown RBP14.12□□□□□ -0.15
GABRB3-211ENST00000556636 SRP68Q9UHB9 627 aaKnown RBP14.12□□□□□ -0.15
GABRB3-211ENST00000556636 UBR2Q8IWV8 1755 aa14.11□□□□□ -0.15
GABRB3-211ENST00000556636 CANXP27824 592 aaKnown RBP14.11□□□□□ -0.15
GABRB3-211ENST00000556636 NLGN1Q8N2Q7 840 aa14.11□□□□□ -0.15
GABRB3-211ENST00000556636 MRS2Q9HD23 443 aa14.11□□□□□ -0.15
GABRB3-211ENST00000556636 DLG5Q8TDM6 1919 aa14.1□□□□□ -0.15
GABRB3-211ENST00000556636 GIGYF1O75420 1035 aaPredicted RBP14.1□□□□□ -0.15
GABRB3-211ENST00000556636 LMOD3Q0VAK6 560 aa14.1□□□□□ -0.15
GABRB3-211ENST00000556636 FKBP8Q14318 412 aa14.1□□□□□ -0.15
GABRB3-211ENST00000556636 BCL2L12Q9HB09 334 aa14.1□□□□□ -0.15
GABRB3-211ENST00000556636 USP42Q9H9J4 1324 aaKnown RBP14.1□□□□□ -0.15
GABRB3-211ENST00000556636 CHL1O00533 1208 aa14.09□□□□□ -0.15
GABRB3-211ENST00000556636 MMP10P09238 476 aa14.09□□□□□ -0.15
GABRB3-211ENST00000556636 BABAM1Q9NWV8 329 aa14.09□□□□□ -0.15
GABRB3-211ENST00000556636 NARFQ9UHQ1 456 aa14.09□□□□□ -0.15
GABRB3-211ENST00000556636 NBPF26B4DH59 902 aa14.08□□□□□ -0.16
GABRB3-211ENST00000556636 TM4SF1P30408 202 aa14.08□□□□□ -0.16
GABRB3-211ENST00000556636 IL6STP40189 918 aaPredicted RBP14.08□□□□□ -0.16
GABRB3-211ENST00000556636 USPL1Q5W0Q7 1092 aa14.08□□□□□ -0.16
GABRB3-211ENST00000556636 NBPF10Q6P3W6 841 aaKnown RBP14.08□□□□□ -0.16
GABRB3-211ENST00000556636 NBPF15Q8N660 670 aa14.08□□□□□ -0.16
GABRB3-211ENST00000556636 NLGN2Q8NFZ4 835 aa14.08□□□□□ -0.16
GABRB3-211ENST00000556636 PIP4K2AP48426 406 aaPredicted RBP14.07□□□□□ -0.16
GABRB3-211ENST00000556636 TSPYL4Q9UJ04 414 aa14.07□□□□□ -0.16
GABRB3-211ENST00000556636 CD2APQ9Y5K6 639 aa14.07□□□□□ -0.16
GABRB3-211ENST00000556636 COL15A1P39059 1388 aa14.07□□□□□ -0.16
GABRB3-211ENST00000556636 ZPR1O75312 459 aa14.06□□□□□ -0.16
GABRB3-211ENST00000556636 TBC1D2BQ9UPU7 963 aa14.06□□□□□ -0.16
GABRB3-211ENST00000556636 ZNF853P0CG23 659 aa14.05□□□□□ -0.16
GABRB3-211ENST00000556636 DDR1Q08345 913 aa14.05□□□□□ -0.16
GABRB3-211ENST00000556636 KLHL34Q8N239 644 aa14.05□□□□□ -0.16
GABRB3-211ENST00000556636 A0A087WZG4 1122 aa14.04□□□□□ -0.16
GABRB3-211ENST00000556636 NFIXQ14938 502 aa14.04□□□□□ -0.16
GABRB3-211ENST00000556636 CFAP44Q96MT7 982 aa14.04□□□□□ -0.16
GABRB3-211ENST00000556636 UTRNP46939 3433 aa14.04□□□□□ -0.16
GABRB3-211ENST00000556636 SENP3-EIF4A1A0A087X0R7 540 aa14.03□□□□□ -0.16
GABRB3-211ENST00000556636 POLRMTO00411 1230 aaKnown RBP14.03□□□□□ -0.16
GABRB3-211ENST00000556636 CAMTA2O94983 1202 aa14.03□□□□□ -0.16
GABRB3-211ENST00000556636 KRT24Q2M2I5 525 aa14.03□□□□□ -0.16
GABRB3-211ENST00000556636 PARP3Q9Y6F1 533 aa14.03□□□□□ -0.16
GABRB3-211ENST00000556636 KDM3BQ7LBC6 1761 aa14.02□□□□□ -0.16
GABRB3-211ENST00000556636 PDIA6Q15084 440 aa14.02□□□□□ -0.17
GABRB3-211ENST00000556636 CCDC27Q2M243 656 aa14.02□□□□□ -0.17
GABRB3-211ENST00000556636 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
GABRB3-211ENST00000556636 LRP10Q7Z4F1 713 aa14.02□□□□□ -0.17
GABRB3-211ENST00000556636 ZNF330Q9Y3S2 320 aaPredicted RBP14.02□□□□□ -0.17
GABRB3-211ENST00000556636 LAS1LQ9Y4W2 734 aaKnown RBP14.02□□□□□ -0.17
GABRB3-211ENST00000556636 GOLGB1Q14789 3259 aaKnown RBP14.02□□□□□ -0.17
GABRB3-211ENST00000556636 C4AP0C0L4 1744 aa14.01□□□□□ -0.17
GABRB3-211ENST00000556636 TBC1D9BQ66K14 1250 aa14.01□□□□□ -0.17
GABRB3-211ENST00000556636 DZIP3Q86Y13 1208 aaKnown RBP14.01□□□□□ -0.17
GABRB3-211ENST00000556636 WWC1Q8IX03 1113 aa14.01□□□□□ -0.17
GABRB3-211ENST00000556636 MBIPQ9NS73 344 aa14.01□□□□□ -0.17
GABRB3-211ENST00000556636 FAM9BQ8IZU0 186 aa14□□□□□ -0.17
GABRB3-211ENST00000556636 IFT57Q9NWB7 429 aa14□□□□□ -0.17
GABRB3-211ENST00000556636 SERPINB2P05120 415 aa13.99□□□□□ -0.17
GABRB3-211ENST00000556636 YBX3P16989 372 aaKnown RBP eCLIP13.99□□□□□ -0.17
GABRB3-211ENST00000556636 EIF2S2P20042 333 aaKnown RBP13.99□□□□□ -0.17
GABRB3-211ENST00000556636 KCNA3P22001 575 aa13.99□□□□□ -0.17
GABRB3-211ENST00000556636 TGFB2P61812 414 aa13.99□□□□□ -0.17
GABRB3-211ENST00000556636 TTLL7Q6ZT98 887 aa13.99□□□□□ -0.17
GABRB3-211ENST00000556636 GNAI1P63096 354 aa13.98□□□□□ -0.17
GABRB3-211ENST00000556636 HLFQ16534 295 aa13.98□□□□□ -0.17
GABRB3-211ENST00000556636 PROSER3Q2NL68 480 aa13.98□□□□□ -0.17
GABRB3-211ENST00000556636 CLEC4GQ6UXB4 293 aa13.98□□□□□ -0.17
GABRB3-211ENST00000556636 BICDL1Q6ZP65 573 aa13.98□□□□□ -0.17
GABRB3-211ENST00000556636 C10orf71Q711Q0 1435 aa13.98□□□□□ -0.17
GABRB3-211ENST00000556636 ERBB4Q15303 1308 aa13.97□□□□□ -0.17
GABRB3-211ENST00000556636 A0A0G2JLW4 131 aa13.97□□□□□ -0.17
GABRB3-211ENST00000556636 DCAF8L1A6NGE4 600 aa13.97□□□□□ -0.17
GABRB3-211ENST00000556636 RGL2O15211 777 aa13.97□□□□□ -0.17
GABRB3-211ENST00000556636 ANXA1P04083 346 aa13.97□□□□□ -0.17
GABRB3-211ENST00000556636 MYL6BP14649 208 aa13.97□□□□□ -0.17
GABRB3-211ENST00000556636 CALD1Q05682 793 aaKnown RBP13.97□□□□□ -0.17
GABRB3-211ENST00000556636 GPR162Q16538 588 aa13.97□□□□□ -0.17
GABRB3-211ENST00000556636 NPM2Q86SE8 214 aaKnown RBP13.97□□□□□ -0.17
GABRB3-211ENST00000556636 NGEFQ8N5V2 710 aa13.97□□□□□ -0.17
GABRB3-211ENST00000556636 DPEP1P16444 411 aa13.96□□□□□ -0.17
GABRB3-211ENST00000556636 DUSP27Q5VZP5 1158 aa13.96□□□□□ -0.17
GABRB3-211ENST00000556636 C8orf58Q8NAV2 365 aa13.96□□□□□ -0.17
GABRB3-211ENST00000556636 NECTIN2Q92692 538 aa13.96□□□□□ -0.17
GABRB3-211ENST00000556636 SALL2Q9Y467 1007 aaPredicted RBP13.96□□□□□ -0.17
GABRB3-211ENST00000556636 PXDNLA1KZ92 1463 aa13.95□□□□□ -0.18
GABRB3-211ENST00000556636 ERVV-1B6SEH8 477 aa13.95□□□□□ -0.18
GABRB3-211ENST00000556636 HOXB7P09629 217 aa13.95□□□□□ -0.18
GABRB3-211ENST00000556636 SETDB2Q96T68 719 aa13.95□□□□□ -0.18
GABRB3-211ENST00000556636 IL16Q14005 1332 aa13.94□□□□□ -0.18
GABRB3-211ENST00000556636 MAP3K15Q6ZN16 1313 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms