RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 MRS2Q9HD23 443 aa19.99■□□□□ 0.79
ACTN1-217ENST00000556203 ZBTB1Q9Y2K1 713 aa19.99■□□□□ 0.79
ACTN1-217ENST00000556203 SOS1Q07889 1333 aaPredicted RBP19.98■□□□□ 0.79
ACTN1-217ENST00000556203 KLHL34Q8N239 644 aa19.97■□□□□ 0.79
ACTN1-217ENST00000556203 DLG5Q8TDM6 1919 aa19.97■□□□□ 0.79
ACTN1-217ENST00000556203 MYH14Q7Z406 1995 aaKnown RBP19.97■□□□□ 0.79
ACTN1-217ENST00000556203 PRAMEF22A3QJZ6 481 aa19.96■□□□□ 0.79
ACTN1-217ENST00000556203 SNRPA1P09661 255 aaKnown RBP19.96■□□□□ 0.79
ACTN1-217ENST00000556203 CANXP27824 592 aaKnown RBP19.96■□□□□ 0.79
ACTN1-217ENST00000556203 SYT17Q9BSW7 474 aa19.96■□□□□ 0.79
ACTN1-217ENST00000556203 COL24A1Q17RW2 1714 aa19.96■□□□□ 0.79
ACTN1-217ENST00000556203 SRP68Q9UHB9 627 aaKnown RBP19.95■□□□□ 0.78
ACTN1-217ENST00000556203 TRIM35Q9UPQ4 493 aa19.95■□□□□ 0.78
ACTN1-217ENST00000556203 APAF1O14727 1248 aa19.94■□□□□ 0.78
ACTN1-217ENST00000556203 GYS1P13807 737 aa19.94■□□□□ 0.78
ACTN1-217ENST00000556203 USP16Q9Y5T5 823 aa19.94■□□□□ 0.78
ACTN1-217ENST00000556203 USP42Q9H9J4 1324 aaKnown RBP19.94■□□□□ 0.78
ACTN1-217ENST00000556203 COL15A1P39059 1388 aa19.94■□□□□ 0.78
ACTN1-217ENST00000556203 A1BGP04217 495 aa19.93■□□□□ 0.78
ACTN1-217ENST00000556203 MMP10P09238 476 aa19.93■□□□□ 0.78
ACTN1-217ENST00000556203 NLGN1Q8N2Q7 840 aa19.93■□□□□ 0.78
ACTN1-217ENST00000556203 TSPYL4Q9UJ04 414 aa19.93■□□□□ 0.78
ACTN1-217ENST00000556203 EIF4A1P60842 406 aaKnown RBP19.92■□□□□ 0.78
ACTN1-217ENST00000556203 ZPR1O75312 459 aa19.91■□□□□ 0.78
ACTN1-217ENST00000556203 EIF5P55010 431 aaKnown RBP19.91■□□□□ 0.78
ACTN1-217ENST00000556203 USPL1Q5W0Q7 1092 aa19.91■□□□□ 0.78
ACTN1-217ENST00000556203 ZNF330Q9Y3S2 320 aaPredicted RBP19.91■□□□□ 0.78
ACTN1-217ENST00000556203 FKBP8Q14318 412 aa19.9■□□□□ 0.78
ACTN1-217ENST00000556203 BABAM1Q9NWV8 329 aa19.9■□□□□ 0.78
ACTN1-217ENST00000556203 A0A087WZG4 1122 aa19.89■□□□□ 0.77
ACTN1-217ENST00000556203 GIGYF1O75420 1035 aaPredicted RBP19.89■□□□□ 0.77
ACTN1-217ENST00000556203 C4AP0C0L4 1744 aa19.89■□□□□ 0.77
ACTN1-217ENST00000556203 IL6STP40189 918 aaPredicted RBP19.89■□□□□ 0.77
ACTN1-217ENST00000556203 PIP4K2AP48426 406 aaPredicted RBP19.89■□□□□ 0.77
ACTN1-217ENST00000556203 NARFQ9UHQ1 456 aa19.89■□□□□ 0.77
ACTN1-217ENST00000556203 LAS1LQ9Y4W2 734 aaKnown RBP19.89■□□□□ 0.77
ACTN1-217ENST00000556203 KDM3BQ7LBC6 1761 aa19.88■□□□□ 0.77
ACTN1-217ENST00000556203 NLGN2Q8NFZ4 835 aa19.88■□□□□ 0.77
ACTN1-217ENST00000556203 NPM2Q86SE8 214 aaKnown RBP19.87■□□□□ 0.77
ACTN1-217ENST00000556203 CD2APQ9Y5K6 639 aa19.87■□□□□ 0.77
ACTN1-217ENST00000556203 SENP3-EIF4A1A0A087X0R7 540 aa19.86■□□□□ 0.77
ACTN1-217ENST00000556203 CHL1O00533 1208 aa19.86■□□□□ 0.77
ACTN1-217ENST00000556203 TBC1D2BQ9UPU7 963 aa19.86■□□□□ 0.77
ACTN1-217ENST00000556203 PARP3Q9Y6F1 533 aa19.86■□□□□ 0.77
ACTN1-217ENST00000556203 DCAF8L1A6NGE4 600 aa19.85■□□□□ 0.77
ACTN1-217ENST00000556203 NBPF26B4DH59 902 aa19.85■□□□□ 0.77
ACTN1-217ENST00000556203 NBPF10Q6P3W6 841 aaKnown RBP19.85■□□□□ 0.77
ACTN1-217ENST00000556203 NBPF15Q8N660 670 aa19.85■□□□□ 0.77
ACTN1-217ENST00000556203 BCL2L12Q9HB09 334 aa19.85■□□□□ 0.77
ACTN1-217ENST00000556203 DDR1Q08345 913 aa19.84■□□□□ 0.77
ACTN1-217ENST00000556203 TM4SF1P30408 202 aa19.83■□□□□ 0.77
ACTN1-217ENST00000556203 FAM9BQ8IZU0 186 aa19.83■□□□□ 0.77
ACTN1-217ENST00000556203 CFAP44Q96MT7 982 aa19.83■□□□□ 0.77
ACTN1-217ENST00000556203 CALD1Q05682 793 aaKnown RBP19.82■□□□□ 0.76
ACTN1-217ENST00000556203 NFIXQ14938 502 aa19.82■□□□□ 0.76
ACTN1-217ENST00000556203 DZIP3Q86Y13 1208 aaKnown RBP19.82■□□□□ 0.76
ACTN1-217ENST00000556203 POLRMTO00411 1230 aaKnown RBP19.81■□□□□ 0.76
ACTN1-217ENST00000556203 CAMTA2O94983 1202 aa19.81■□□□□ 0.76
ACTN1-217ENST00000556203 EIF2S2P20042 333 aaKnown RBP19.8■□□□□ 0.76
ACTN1-217ENST00000556203 KRT24Q2M2I5 525 aa19.8■□□□□ 0.76
ACTN1-217ENST00000556203 BICDL1Q6ZP65 573 aa19.8■□□□□ 0.76
ACTN1-217ENST00000556203 MBIPQ9NS73 344 aa19.8■□□□□ 0.76
ACTN1-217ENST00000556203 IFT57Q9NWB7 429 aa19.8■□□□□ 0.76
ACTN1-217ENST00000556203 C10orf71Q711Q0 1435 aa19.79■□□□□ 0.76
ACTN1-217ENST00000556203 ZNF853P0CG23 659 aa19.79■□□□□ 0.76
ACTN1-217ENST00000556203 CCDC27Q2M243 656 aa19.79■□□□□ 0.76
ACTN1-217ENST00000556203 PELP1Q8IZL8 1130 aaKnown RBP19.79■□□□□ 0.76
ACTN1-217ENST00000556203 NGEFQ8N5V2 710 aa19.79■□□□□ 0.76
ACTN1-217ENST00000556203 LAMB4A4D0S4 1761 aa19.79■□□□□ 0.76
ACTN1-217ENST00000556203 MYL6BP14649 208 aa19.78■□□□□ 0.76
ACTN1-217ENST00000556203 GNAI1P63096 354 aa19.78■□□□□ 0.76
ACTN1-217ENST00000556203 GPR162Q16538 588 aa19.78■□□□□ 0.76
ACTN1-217ENST00000556203 TBC1D9BQ66K14 1250 aa19.78■□□□□ 0.76
ACTN1-217ENST00000556203 ERBB4Q15303 1308 aa19.77■□□□□ 0.76
ACTN1-217ENST00000556203 WWC1Q8IX03 1113 aa19.77■□□□□ 0.76
ACTN1-217ENST00000556203 SERPINB2P05120 415 aa19.76■□□□□ 0.75
ACTN1-217ENST00000556203 NECTIN2Q92692 538 aa19.76■□□□□ 0.75
ACTN1-217ENST00000556203 SALL2Q9Y467 1007 aaPredicted RBP19.76■□□□□ 0.75
ACTN1-217ENST00000556203 SCN7AQ01118 1682 aa19.75■□□□□ 0.75
ACTN1-217ENST00000556203 TGFB2P61812 414 aa19.75■□□□□ 0.75
ACTN1-217ENST00000556203 NCBP3Q53F19 620 aaKnown RBP19.75■□□□□ 0.75
ACTN1-217ENST00000556203 WWC3Q9ULE0 1092 aa19.75■□□□□ 0.75
ACTN1-217ENST00000556203 PDIA6Q15084 440 aa19.74■□□□□ 0.75
ACTN1-217ENST00000556203 PROSER3Q2NL68 480 aa19.74■□□□□ 0.75
ACTN1-217ENST00000556203 DUSP27Q5VZP5 1158 aa19.74■□□□□ 0.75
ACTN1-217ENST00000556203 CLEC4GQ6UXB4 293 aa19.74■□□□□ 0.75
ACTN1-217ENST00000556203 ZNF652Q9Y2D9 606 aa19.74■□□□□ 0.75
ACTN1-217ENST00000556203 PXDNLA1KZ92 1463 aa19.73■□□□□ 0.75
ACTN1-217ENST00000556203 A0A0G2JLW4 131 aa19.73■□□□□ 0.75
ACTN1-217ENST00000556203 ANXA1P04083 346 aa19.73■□□□□ 0.75
ACTN1-217ENST00000556203 HOXB7P09629 217 aa19.73■□□□□ 0.75
ACTN1-217ENST00000556203 YBX3P16989 372 aaKnown RBP eCLIP19.73■□□□□ 0.75
ACTN1-217ENST00000556203 KIF6Q6ZMV9 814 aa19.73■□□□□ 0.75
ACTN1-217ENST00000556203 TTLL7Q6ZT98 887 aa19.73■□□□□ 0.75
ACTN1-217ENST00000556203 SETDB2Q96T68 719 aa19.73■□□□□ 0.75
ACTN1-217ENST00000556203 CARMIL3Q8ND23 1372 aa19.72■□□□□ 0.75
ACTN1-217ENST00000556203 RGL2O15211 777 aa19.72■□□□□ 0.75
ACTN1-217ENST00000556203 DPEP1P16444 411 aa19.72■□□□□ 0.75
ACTN1-217ENST00000556203 HLFQ16534 295 aa19.72■□□□□ 0.75
ACTN1-217ENST00000556203 HDGFL1Q5TGJ6 251 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms