RNA–Protein interactions for RNA: ENST00000554996.5

CCDC85C-203, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-203ENST00000554996 YBX3P16989 372 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCDC85C-203ENST00000554996 RC3H1Q5TC82 1133 aaKnown RBP13.74□□□□□ -0.21
CCDC85C-203ENST00000554996 INTS5Q6P9B9 1019 aaKnown RBP13.74□□□□□ -0.21
CCDC85C-203ENST00000554996 NGEFQ8N5V2 710 aa13.74□□□□□ -0.21
CCDC85C-203ENST00000554996 ARHGEF1Q92888 912 aaKnown RBP13.74□□□□□ -0.21
CCDC85C-203ENST00000554996 C10orf71Q711Q0 1435 aa13.73□□□□□ -0.21
CCDC85C-203ENST00000554996 NRXN2Q9P2S2 1712 aa13.73□□□□□ -0.21
CCDC85C-203ENST00000554996 ZNF521Q96K83 1311 aa13.73□□□□□ -0.21
CCDC85C-203ENST00000554996 RPS6KA4O75676 772 aa13.73□□□□□ -0.21
CCDC85C-203ENST00000554996 LMOD3Q0VAK6 560 aa13.73□□□□□ -0.21
CCDC85C-203ENST00000554996 DCTN1Q14203 1278 aa13.73□□□□□ -0.21
CCDC85C-203ENST00000554996 MCM10Q7L590 875 aa13.73□□□□□ -0.21
CCDC85C-203ENST00000554996 SRP68Q9UHB9 627 aaKnown RBP13.73□□□□□ -0.21
CCDC85C-203ENST00000554996 RTCBQ9Y3I0 505 aaKnown RBP13.73□□□□□ -0.21
CCDC85C-203ENST00000554996 PXDNLA1KZ92 1463 aa13.73□□□□□ -0.21
CCDC85C-203ENST00000554996 KCNQ3O43525 872 aa13.72□□□□□ -0.21
CCDC85C-203ENST00000554996 GYS1P13807 737 aa13.72□□□□□ -0.21
CCDC85C-203ENST00000554996 RTF1Q92541 710 aaKnown RBP13.72□□□□□ -0.21
CCDC85C-203ENST00000554996 ZBTB1Q9Y2K1 713 aa13.72□□□□□ -0.21
CCDC85C-203ENST00000554996 SOS1Q07889 1333 aaPredicted RBP13.71□□□□□ -0.21
CCDC85C-203ENST00000554996 MMP10P09238 476 aa13.71□□□□□ -0.21
CCDC85C-203ENST00000554996 CYP19A1P11511 503 aaPredicted RBP13.71□□□□□ -0.21
CCDC85C-203ENST00000554996 NEUROD2Q15784 382 aa13.71□□□□□ -0.21
CCDC85C-203ENST00000554996 WWC1Q8IX03 1113 aa13.71□□□□□ -0.21
CCDC85C-203ENST00000554996 THUMPD2Q9BTF0 503 aaKnown RBP13.71□□□□□ -0.21
CCDC85C-203ENST00000554996 USP42Q9H9J4 1324 aaKnown RBP13.7□□□□□ -0.22
CCDC85C-203ENST00000554996 ANKRD31Q8N7Z5 1873 aa13.7□□□□□ -0.22
CCDC85C-203ENST00000554996 TRAPPC3LQ5T215 181 aa13.7□□□□□ -0.22
CCDC85C-203ENST00000554996 ZNF496Q96IT1 587 aaPredicted RBP13.7□□□□□ -0.22
CCDC85C-203ENST00000554996 WWC3Q9ULE0 1092 aa13.7□□□□□ -0.22
CCDC85C-203ENST00000554996 DLEC1Q9Y238 1755 aa13.7□□□□□ -0.22
CCDC85C-203ENST00000554996 COL15A1P39059 1388 aa13.7□□□□□ -0.22
CCDC85C-203ENST00000554996 HEG1Q9ULI3 1381 aa13.7□□□□□ -0.22
CCDC85C-203ENST00000554996 SENP3-EIF4A1A0A087X0R7 540 aa13.69□□□□□ -0.22
CCDC85C-203ENST00000554996 ADRA2BP18089 450 aa13.69□□□□□ -0.22
CCDC85C-203ENST00000554996 FKBP8Q14318 412 aa13.69□□□□□ -0.22
CCDC85C-203ENST00000554996 PELP1Q8IZL8 1130 aaKnown RBP13.69□□□□□ -0.22
CCDC85C-203ENST00000554996 CCDC87Q9NVE4 849 aa13.69□□□□□ -0.22
CCDC85C-203ENST00000554996 COL11A2P13942 1736 aaPredicted RBP13.68□□□□□ -0.22
CCDC85C-203ENST00000554996 PRAMEF22A3QJZ6 481 aa13.68□□□□□ -0.22
CCDC85C-203ENST00000554996 ZNF853P0CG23 659 aa13.68□□□□□ -0.22
CCDC85C-203ENST00000554996 HMGB2P26583 209 aaKnown RBP13.68□□□□□ -0.22
CCDC85C-203ENST00000554996 DDR1Q08345 913 aa13.68□□□□□ -0.22
CCDC85C-203ENST00000554996 GPR162Q16538 588 aa13.68□□□□□ -0.22
CCDC85C-203ENST00000554996 ZNF790Q6PG37 636 aa13.68□□□□□ -0.22
CCDC85C-203ENST00000554996 CD2APQ9Y5K6 639 aa13.68□□□□□ -0.22
CCDC85C-203ENST00000554996 ARFGEF1Q9Y6D6 1849 aa13.68□□□□□ -0.22
CCDC85C-203ENST00000554996 IL16Q14005 1332 aa13.67□□□□□ -0.22
CCDC85C-203ENST00000554996 TEFQ10587 303 aa13.67□□□□□ -0.22
CCDC85C-203ENST00000554996 WDR63Q8IWG1 891 aa13.67□□□□□ -0.22
CCDC85C-203ENST00000554996 BCL2L12Q9HB09 334 aa13.67□□□□□ -0.22
CCDC85C-203ENST00000554996 CHL1O00533 1208 aa13.66□□□□□ -0.22
CCDC85C-203ENST00000554996 RFC4P35249 363 aa13.66□□□□□ -0.22
CCDC85C-203ENST00000554996 TAF7Q15545 349 aaPredicted RBP13.66□□□□□ -0.22
CCDC85C-203ENST00000554996 VSIG10Q8N0Z9 540 aa13.66□□□□□ -0.22
CCDC85C-203ENST00000554996 BABAM1Q9NWV8 329 aa13.66□□□□□ -0.22
CCDC85C-203ENST00000554996 HNRNPUQ00839 825 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCDC85C-203ENST00000554996 CALD1Q05682 793 aaKnown RBP13.65□□□□□ -0.22
CCDC85C-203ENST00000554996 CFAP44Q96MT7 982 aa13.65□□□□□ -0.22
CCDC85C-203ENST00000554996 IFT57Q9NWB7 429 aa13.65□□□□□ -0.22
CCDC85C-203ENST00000554996 ZBED9Q6R2W3 1325 aa13.64□□□□□ -0.23
CCDC85C-203ENST00000554996 CACNA1SQ13698 1873 aa13.64□□□□□ -0.23
CCDC85C-203ENST00000554996 CARMIL3Q8ND23 1372 aa13.64□□□□□ -0.23
CCDC85C-203ENST00000554996 BTBD11A6QL63 1104 aa13.64□□□□□ -0.23
CCDC85C-203ENST00000554996 PIP4K2AP48426 406 aaPredicted RBP13.64□□□□□ -0.23
CCDC85C-203ENST00000554996 USPL1Q5W0Q7 1092 aa13.64□□□□□ -0.23
CCDC85C-203ENST00000554996 TTC5Q8N0Z6 440 aa13.64□□□□□ -0.23
CCDC85C-203ENST00000554996 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
CCDC85C-203ENST00000554996 SALL2Q9Y467 1007 aaPredicted RBP13.64□□□□□ -0.23
CCDC85C-203ENST00000554996 POLRMTO00411 1230 aaKnown RBP13.63□□□□□ -0.23
CCDC85C-203ENST00000554996 CANXP27824 592 aaKnown RBP13.63□□□□□ -0.23
CCDC85C-203ENST00000554996 NLGN1Q8N2Q7 840 aa13.63□□□□□ -0.23
CCDC85C-203ENST00000554996 ZNF784Q8NCA9 323 aaPredicted RBP13.63□□□□□ -0.23
CCDC85C-203ENST00000554996 A1BGP04217 495 aa13.62□□□□□ -0.23
CCDC85C-203ENST00000554996 TM4SF1P30408 202 aa13.62□□□□□ -0.23
CCDC85C-203ENST00000554996 EIF5P55010 431 aaKnown RBP13.62□□□□□ -0.23
CCDC85C-203ENST00000554996 MBIPQ9NS73 344 aa13.62□□□□□ -0.23
CCDC85C-203ENST00000554996 MIS18AQ9NYP9 233 aa13.62□□□□□ -0.23
CCDC85C-203ENST00000554996 ADCY9O60503 1353 aa13.61□□□□□ -0.23
CCDC85C-203ENST00000554996 GNAI1P63096 354 aa13.61□□□□□ -0.23
CCDC85C-203ENST00000554996 NFIXQ14938 502 aa13.61□□□□□ -0.23
CCDC85C-203ENST00000554996 TRMT2AQ8IZ69 625 aaKnown RBP13.61□□□□□ -0.23
CCDC85C-203ENST00000554996 FMNL2Q96PY5 1086 aa13.61□□□□□ -0.23
CCDC85C-203ENST00000554996 NARFQ9UHQ1 456 aa13.61□□□□□ -0.23
CCDC85C-203ENST00000554996 TSPYL4Q9UJ04 414 aa13.61□□□□□ -0.23
CCDC85C-203ENST00000554996 USP16Q9Y5T5 823 aa13.61□□□□□ -0.23
CCDC85C-203ENST00000554996 A0A0G2JLW4 131 aa13.6□□□□□ -0.23
CCDC85C-203ENST00000554996 DPEP1P16444 411 aa13.6□□□□□ -0.23
CCDC85C-203ENST00000554996 KCNA3P22001 575 aa13.6□□□□□ -0.23
CCDC85C-203ENST00000554996 EIF4A1P60842 406 aaKnown RBP13.6□□□□□ -0.23
CCDC85C-203ENST00000554996 GOLGA2Q08379 1002 aa13.6□□□□□ -0.23
CCDC85C-203ENST00000554996 PARP3Q9Y6F1 533 aa13.6□□□□□ -0.23
CCDC85C-203ENST00000554996 FANCIQ9NVI1 1328 aa13.6□□□□□ -0.23
CCDC85C-203ENST00000554996 NUP98P52948 1817 aa13.6□□□□□ -0.23
CCDC85C-203ENST00000554996 SBF1O95248 1867 aa13.59□□□□□ -0.23
CCDC85C-203ENST00000554996 ARFGEF2Q9Y6D5 1785 aa13.59□□□□□ -0.23
CCDC85C-203ENST00000554996 SLFN5Q08AF3 891 aa13.59□□□□□ -0.23
CCDC85C-203ENST00000554996 TNRC6CQ9HCJ0 1690 aaKnown RBP13.59□□□□□ -0.23
CCDC85C-203ENST00000554996 NBPF26B4DH59 902 aa13.58□□□□□ -0.24
CCDC85C-203ENST00000554996 E9PSI1 815 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms