RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 C1orf216Q8TAB5 229 aa7.8□□□□□ -1.16
SCFD1-214ENST00000554819 GMCL1Q96IK5 515 aa7.8□□□□□ -1.16
SCFD1-214ENST00000554819 USP3Q9Y6I4 520 aa7.8□□□□□ -1.16
SCFD1-214ENST00000554819 SERTM1A2A2V5 107 aa7.79□□□□□ -1.16
SCFD1-214ENST00000554819 H3BM21 787 aa7.79□□□□□ -1.16
SCFD1-214ENST00000554819 PPP1R12BO60237 982 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-214ENST00000554819 CSB-PGBD3P0DP91 1061 aa7.79□□□□□ -1.16
SCFD1-214ENST00000554819 TBCELQ5QJ74 424 aa7.79□□□□□ -1.16
SCFD1-214ENST00000554819 ZNF295-AS1Q8N0V1 137 aa7.79□□□□□ -1.16
SCFD1-214ENST00000554819 STAG2Q8N3U4 1231 aa7.79□□□□□ -1.16
SCFD1-214ENST00000554819 SCG3Q8WXD2 468 aaKnown RBP7.79□□□□□ -1.16
SCFD1-214ENST00000554819 L3MBTL2Q969R5 705 aa7.79□□□□□ -1.16
SCFD1-214ENST00000554819 ZDHHC3Q9NYG2 299 aa7.79□□□□□ -1.16
SCFD1-214ENST00000554819 ZNF232Q9UNY5 417 aa7.79□□□□□ -1.16
SCFD1-214ENST00000554819 TATP17735 454 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-214ENST00000554819 IGFBP4P22692 258 aa7.78□□□□□ -1.16
SCFD1-214ENST00000554819 VEGFBP49765 207 aa7.78□□□□□ -1.16
SCFD1-214ENST00000554819 TMEM164Q5U3C3 297 aa7.78□□□□□ -1.16
SCFD1-214ENST00000554819 RIPOR1Q6ZS17 1223 aa7.78□□□□□ -1.16
SCFD1-214ENST00000554819 PGBD3Q8N328 593 aa7.78□□□□□ -1.16
SCFD1-214ENST00000554819 STK32AQ8WU08 396 aa7.78□□□□□ -1.16
SCFD1-214ENST00000554819 IRF7Q92985 503 aa7.78□□□□□ -1.16
SCFD1-214ENST00000554819 MSX1P28360 303 aa7.77□□□□□ -1.17
SCFD1-214ENST00000554819 NANOS1Q8WY41 292 aaKnown RBP7.77□□□□□ -1.17
SCFD1-214ENST00000554819 PARP3Q9Y6F1 533 aa7.77□□□□□ -1.17
SCFD1-214ENST00000554819 C21orf2O43822 256 aa7.76□□□□□ -1.17
SCFD1-214ENST00000554819 WFS1O76024 890 aa7.76□□□□□ -1.17
SCFD1-214ENST00000554819 WEE1P30291 646 aa7.76□□□□□ -1.17
SCFD1-214ENST00000554819 HIRAP54198 1017 aaPredicted RBP7.76□□□□□ -1.17
SCFD1-214ENST00000554819 PDE4CQ08493 712 aa7.76□□□□□ -1.17
SCFD1-214ENST00000554819 FAM69CQ0P6D2 419 aa7.76□□□□□ -1.17
SCFD1-214ENST00000554819 NFX1Q12986 1120 aaKnown RBP7.76□□□□□ -1.17
SCFD1-214ENST00000554819 LBRQ14739 615 aaKnown RBP7.76□□□□□ -1.17
SCFD1-214ENST00000554819 SV2AQ7L0J3 742 aa7.76□□□□□ -1.17
SCFD1-214ENST00000554819 TRIM22Q8IYM9 498 aa7.76□□□□□ -1.17
SCFD1-214ENST00000554819 ZDHHC1Q8WTX9 485 aa7.76□□□□□ -1.17
SCFD1-214ENST00000554819 CHMP7Q8WUX9 453 aaPredicted RBP7.76□□□□□ -1.17
SCFD1-214ENST00000554819 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.76□□□□□ -1.17
SCFD1-214ENST00000554819 EML1O00423 815 aa7.75□□□□□ -1.17
SCFD1-214ENST00000554819 FOXO3O43524 673 aa7.75□□□□□ -1.17
SCFD1-214ENST00000554819 ARSJQ5FYB0 599 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-214ENST00000554819 C1orf53Q5VUE5 145 aa7.75□□□□□ -1.17
SCFD1-214ENST00000554819 FOXR1Q6PIV2 292 aa7.75□□□□□ -1.17
SCFD1-214ENST00000554819 POTEAQ6S8J7 498 aa7.75□□□□□ -1.17
SCFD1-214ENST00000554819 TREML4Q6UXN2 200 aa7.75□□□□□ -1.17
SCFD1-214ENST00000554819 CLP1Q92989 425 aaKnown RBP7.75□□□□□ -1.17
SCFD1-214ENST00000554819 VTI1AQ96AJ9 217 aa7.75□□□□□ -1.17
SCFD1-214ENST00000554819 C2orf49Q9BVC5 232 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-214ENST00000554819 GPAMQ9HCL2 828 aa7.75□□□□□ -1.17
SCFD1-214ENST00000554819 CDC14CA4D256 554 aa7.74□□□□□ -1.17
SCFD1-214ENST00000554819 LGR5O75473 907 aa7.74□□□□□ -1.17
SCFD1-214ENST00000554819 DBN1Q16643 649 aa7.74□□□□□ -1.17
SCFD1-214ENST00000554819 EFHC2Q5JST6 749 aa7.74□□□□□ -1.17
SCFD1-214ENST00000554819 VWA5B2Q8N398 1253 aa7.74□□□□□ -1.17
SCFD1-214ENST00000554819 NUCKS1Q9H1E3 243 aaKnown RBP7.74□□□□□ -1.17
SCFD1-214ENST00000554819 CRISPLD1Q9H336 500 aa7.74□□□□□ -1.17
SCFD1-214ENST00000554819 GPC6Q9Y625 555 aaPredicted RBP7.74□□□□□ -1.17
SCFD1-214ENST00000554819 PRMT3O60678 531 aa7.73□□□□□ -1.17
SCFD1-214ENST00000554819 VSIG8P0DPA2 414 aa7.73□□□□□ -1.17
SCFD1-214ENST00000554819 TXLNAP40222 546 aa7.73□□□□□ -1.17
SCFD1-214ENST00000554819 BICDL1Q6ZP65 573 aa7.73□□□□□ -1.17
SCFD1-214ENST00000554819 PRIMPOLQ96LW4 560 aa7.73□□□□□ -1.17
SCFD1-214ENST00000554819 RUBCNLQ9H714 662 aa7.73□□□□□ -1.17
SCFD1-214ENST00000554819 NEUROD4Q9HD90 331 aa7.73□□□□□ -1.17
SCFD1-214ENST00000554819 USTQ9Y2C2 406 aa7.73□□□□□ -1.17
SCFD1-214ENST00000554819 HCN4Q9Y3Q4 1203 aa7.73□□□□□ -1.17
SCFD1-214ENST00000554819 ATP4AP20648 1035 aa7.72□□□□□ -1.17
SCFD1-214ENST00000554819 NLRP8Q86W28 1048 aa7.72□□□□□ -1.17
SCFD1-214ENST00000554819 ZNF837Q96EG3 531 aaPredicted RBP7.72□□□□□ -1.17
SCFD1-214ENST00000554819 TRERF1Q96PN7 1200 aa7.72□□□□□ -1.17
SCFD1-214ENST00000554819 PHACTR1Q9C0D0 580 aa7.72□□□□□ -1.17
SCFD1-214ENST00000554819 CUEDC1Q9NWM3 386 aaPredicted RBP7.72□□□□□ -1.17
SCFD1-214ENST00000554819 GJA3Q9Y6H8 435 aa7.72□□□□□ -1.17
SCFD1-214ENST00000554819 A0A1W2PNR3 127 aa7.71□□□□□ -1.18
SCFD1-214ENST00000554819 TMEM88BA6NKF7 163 aa7.71□□□□□ -1.18
SCFD1-214ENST00000554819 SH3PXD2AQ5TCZ1 1133 aa7.71□□□□□ -1.18
SCFD1-214ENST00000554819 FIGNL1Q6PIW4 674 aa7.71□□□□□ -1.18
SCFD1-214ENST00000554819 ALDH16A1Q8IZ83 802 aa7.71□□□□□ -1.18
SCFD1-214ENST00000554819 RHPN1Q8TCX5 695 aa7.71□□□□□ -1.18
SCFD1-214ENST00000554819 ZIC5Q96T25 663 aa7.71□□□□□ -1.18
SCFD1-214ENST00000554819 CXXC1Q9P0U4 656 aaPredicted RBP7.71□□□□□ -1.18
SCFD1-214ENST00000554819 OCLNQ16625 522 aa7.7□□□□□ -1.18
SCFD1-214ENST00000554819 HIF1AQ16665 826 aa7.7□□□□□ -1.18
SCFD1-214ENST00000554819 ANKIB1Q9P2G1 1089 aa7.7□□□□□ -1.18
SCFD1-214ENST00000554819 PHF24Q9UPV7 400 aa7.7□□□□□ -1.18
SCFD1-214ENST00000554819 ERBB4Q15303 1308 aa7.7□□□□□ -1.18
SCFD1-214ENST00000554819 PTCD1O75127 700 aaKnown RBP7.69□□□□□ -1.18
SCFD1-214ENST00000554819 ATP2B4P23634 1241 aa7.69□□□□□ -1.18
SCFD1-214ENST00000554819 GTPBP3Q969Y2 492 aaKnown RBP7.69□□□□□ -1.18
SCFD1-214ENST00000554819 COL26A1Q96A83 441 aa7.69□□□□□ -1.18
SCFD1-214ENST00000554819 NGLY1Q96IV0 654 aa7.69□□□□□ -1.18
SCFD1-214ENST00000554819 FKBP5Q13451 457 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-214ENST00000554819 RTN1Q16799 776 aa7.68□□□□□ -1.18
SCFD1-214ENST00000554819 C7orf43Q8WVR3 580 aa7.68□□□□□ -1.18
SCFD1-214ENST00000554819 CFHR5Q9BXR6 569 aa7.68□□□□□ -1.18
SCFD1-214ENST00000554819 LCE2AQ5TA79 106 aaPredicted RBP7.67□□□□□ -1.18
SCFD1-214ENST00000554819 B4GALNT3Q6L9W6 998 aa7.67□□□□□ -1.18
SCFD1-214ENST00000554819 GPR161Q8N6U8 529 aaKnown RBP7.67□□□□□ -1.18
SCFD1-214ENST00000554819 RETREG2Q8NC44 543 aa7.67□□□□□ -1.18
SCFD1-214ENST00000554819 ZCCHC2Q9C0B9 1178 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms