RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 POLD1P28340 1107 aa30.55■■■□□ 2.48
NEK9-203ENST00000553945 TRIM35Q9UPQ4 493 aa30.55■■■□□ 2.48
NEK9-203ENST00000553945 KDM3BQ7LBC6 1761 aa30.55■■■□□ 2.48
NEK9-203ENST00000553945 ARHGEF1Q92888 912 aaKnown RBP30.54■■■□□ 2.48
NEK9-203ENST00000553945 RFC4P35249 363 aa30.52■■■□□ 2.48
NEK9-203ENST00000553945 ARXQ96QS3 562 aa30.52■■■□□ 2.48
NEK9-203ENST00000553945 ZBTB1Q9Y2K1 713 aa30.52■■■□□ 2.48
NEK9-203ENST00000553945 C4AP0C0L4 1744 aa30.51■■■□□ 2.47
NEK9-203ENST00000553945 SNRPA1P09661 255 aaKnown RBP30.5■■■□□ 2.47
NEK9-203ENST00000553945 CANXP27824 592 aaKnown RBP30.5■■■□□ 2.47
NEK9-203ENST00000553945 TSPYL4Q9UJ04 414 aa30.5■■■□□ 2.47
NEK9-203ENST00000553945 PRAMEF22A3QJZ6 481 aa30.49■■■□□ 2.47
NEK9-203ENST00000553945 SOS1Q07889 1333 aaPredicted RBP30.48■■■□□ 2.47
NEK9-203ENST00000553945 USP16Q9Y5T5 823 aa30.47■■■□□ 2.47
NEK9-203ENST00000553945 LAS1LQ9Y4W2 734 aaKnown RBP30.46■■■□□ 2.47
NEK9-203ENST00000553945 A1BGP04217 495 aa30.45■■■□□ 2.47
NEK9-203ENST00000553945 EIF4A1P60842 406 aaKnown RBP30.45■■■□□ 2.47
NEK9-203ENST00000553945 FAM9BQ8IZU0 186 aa30.45■■■□□ 2.47
NEK9-203ENST00000553945 BABAM1Q9NWV8 329 aa30.45■■■□□ 2.47
NEK9-203ENST00000553945 COL15A1P39059 1388 aa30.44■■■□□ 2.46
NEK9-203ENST00000553945 SENP3-EIF4A1A0A087X0R7 540 aa30.44■■■□□ 2.46
NEK9-203ENST00000553945 FHDC1Q9C0D6 1143 aaPredicted RBP30.44■■■□□ 2.46
NEK9-203ENST00000553945 SRP68Q9UHB9 627 aaKnown RBP30.44■■■□□ 2.46
NEK9-203ENST00000553945 GYS1P13807 737 aa30.42■■■□□ 2.46
NEK9-203ENST00000553945 KLHL34Q8N239 644 aa30.42■■■□□ 2.46
NEK9-203ENST00000553945 ZNF330Q9Y3S2 320 aaPredicted RBP30.42■■■□□ 2.46
NEK9-203ENST00000553945 USP42Q9H9J4 1324 aaKnown RBP30.42■■■□□ 2.46
NEK9-203ENST00000553945 LAMB4A4D0S4 1761 aa30.41■■■□□ 2.46
NEK9-203ENST00000553945 EIF5P55010 431 aaKnown RBP30.41■■■□□ 2.46
NEK9-203ENST00000553945 NLGN1Q8N2Q7 840 aa30.41■■■□□ 2.46
NEK9-203ENST00000553945 ZPR1O75312 459 aa30.4■■■□□ 2.46
NEK9-203ENST00000553945 GIGYF1O75420 1035 aaPredicted RBP30.4■■■□□ 2.46
NEK9-203ENST00000553945 CHL1O00533 1208 aa30.39■■■□□ 2.46
NEK9-203ENST00000553945 IL6STP40189 918 aaPredicted RBP30.39■■■□□ 2.46
NEK9-203ENST00000553945 PIP4K2AP48426 406 aaPredicted RBP30.38■■■□□ 2.45
NEK9-203ENST00000553945 A0A087WZG4 1122 aa30.37■■■□□ 2.45
NEK9-203ENST00000553945 MMP10P09238 476 aa30.37■■■□□ 2.45
NEK9-203ENST00000553945 CALD1Q05682 793 aaKnown RBP30.37■■■□□ 2.45
NEK9-203ENST00000553945 USPL1Q5W0Q7 1092 aa30.37■■■□□ 2.45
NEK9-203ENST00000553945 NPM2Q86SE8 214 aaKnown RBP30.37■■■□□ 2.45
NEK9-203ENST00000553945 SYT17Q9BSW7 474 aa30.37■■■□□ 2.45
NEK9-203ENST00000553945 NARFQ9UHQ1 456 aa30.37■■■□□ 2.45
NEK9-203ENST00000553945 FKBP8Q14318 412 aa30.36■■■□□ 2.45
NEK9-203ENST00000553945 DIEXFQ68CQ4 756 aaKnown RBP30.35■■■□□ 2.45
NEK9-203ENST00000553945 CFAP44Q96MT7 982 aa30.35■■■□□ 2.45
NEK9-203ENST00000553945 NBPF26B4DH59 902 aa30.32■■■□□ 2.44
NEK9-203ENST00000553945 NBPF10Q6P3W6 841 aaKnown RBP30.32■■■□□ 2.44
NEK9-203ENST00000553945 NBPF15Q8N660 670 aa30.32■■■□□ 2.44
NEK9-203ENST00000553945 TBC1D2BQ9UPU7 963 aa30.32■■■□□ 2.44
NEK9-203ENST00000553945 GNAI1P63096 354 aa30.31■■■□□ 2.44
NEK9-203ENST00000553945 CCDC27Q2M243 656 aa30.31■■■□□ 2.44
NEK9-203ENST00000553945 IFT57Q9NWB7 429 aa30.31■■■□□ 2.44
NEK9-203ENST00000553945 SALL2Q9Y467 1007 aaPredicted RBP30.31■■■□□ 2.44
NEK9-203ENST00000553945 MBIPQ9NS73 344 aa30.3■■■□□ 2.44
NEK9-203ENST00000553945 PARP3Q9Y6F1 533 aa30.3■■■□□ 2.44
NEK9-203ENST00000553945 CCER2I3L3R5 266 aa30.29■■■□□ 2.44
NEK9-203ENST00000553945 ZNF853P0CG23 659 aa30.29■■■□□ 2.44
NEK9-203ENST00000553945 KRT24Q2M2I5 525 aa30.29■■■□□ 2.44
NEK9-203ENST00000553945 WWC1Q8IX03 1113 aa30.29■■■□□ 2.44
NEK9-203ENST00000553945 BCL2L12Q9HB09 334 aa30.29■■■□□ 2.44
NEK9-203ENST00000553945 EIF2S2P20042 333 aaKnown RBP30.28■■■□□ 2.44
NEK9-203ENST00000553945 DZIP3Q86Y13 1208 aaKnown RBP30.28■■■□□ 2.44
NEK9-203ENST00000553945 SCN7AQ01118 1682 aa30.27■■■□□ 2.44
NEK9-203ENST00000553945 NCBP3Q53F19 620 aaKnown RBP30.27■■■□□ 2.44
NEK9-203ENST00000553945 NLGN2Q8NFZ4 835 aa30.26■■■□□ 2.43
NEK9-203ENST00000553945 CD2APQ9Y5K6 639 aa30.26■■■□□ 2.43
NEK9-203ENST00000553945 MYL6BP14649 208 aa30.25■■■□□ 2.43
NEK9-203ENST00000553945 TM4SF1P30408 202 aa30.25■■■□□ 2.43
NEK9-203ENST00000553945 DDR1Q08345 913 aa30.25■■■□□ 2.43
NEK9-203ENST00000553945 NGEFQ8N5V2 710 aa30.25■■■□□ 2.43
NEK9-203ENST00000553945 CAMTA2O94983 1202 aa30.24■■■□□ 2.43
NEK9-203ENST00000553945 BCORQ6W2J9 1755 aa30.23■■■□□ 2.43
NEK9-203ENST00000553945 NFIXQ14938 502 aa30.23■■■□□ 2.43
NEK9-203ENST00000553945 NECTIN2Q92692 538 aa30.23■■■□□ 2.43
NEK9-203ENST00000553945 ERBB4Q15303 1308 aa30.22■■■□□ 2.43
NEK9-203ENST00000553945 DCAF8L1A6NGE4 600 aa30.21■■■□□ 2.43
NEK9-203ENST00000553945 POLRMTO00411 1230 aaKnown RBP30.21■■■□□ 2.43
NEK9-203ENST00000553945 BICDL1Q6ZP65 573 aa30.21■■■□□ 2.43
NEK9-203ENST00000553945 DUSP27Q5VZP5 1158 aa30.2■■■□□ 2.43
NEK9-203ENST00000553945 TBC1D9BQ66K14 1250 aa30.2■■■□□ 2.43
NEK9-203ENST00000553945 MIER1Q8N108 512 aa30.2■■■□□ 2.43
NEK9-203ENST00000553945 HOXB7P09629 217 aa30.19■■■□□ 2.42
NEK9-203ENST00000553945 IL16Q14005 1332 aa30.19■■■□□ 2.42
NEK9-203ENST00000553945 TSR2Q969E8 191 aaKnown RBP30.18■■■□□ 2.42
NEK9-203ENST00000553945 C10orf71Q711Q0 1435 aa30.17■■■□□ 2.42
NEK9-203ENST00000553945 HDGFL1Q5TGJ6 251 aa30.17■■■□□ 2.42
NEK9-203ENST00000553945 WDR63Q8IWG1 891 aa30.17■■■□□ 2.42
NEK9-203ENST00000553945 ZNF652Q9Y2D9 606 aa30.17■■■□□ 2.42
NEK9-203ENST00000553945 KIF13BQ9NQT8 1826 aa30.17■■■□□ 2.42
NEK9-203ENST00000553945 ELL2O00472 640 aaPredicted RBP30.16■■■□□ 2.42
NEK9-203ENST00000553945 ANXA1P04083 346 aa30.16■■■□□ 2.42
NEK9-203ENST00000553945 PDIA6Q15084 440 aa30.16■■■□□ 2.42
NEK9-203ENST00000553945 PROSER3Q2NL68 480 aa30.16■■■□□ 2.42
NEK9-203ENST00000553945 KIF6Q6ZMV9 814 aa30.16■■■□□ 2.42
NEK9-203ENST00000553945 TTLL7Q6ZT98 887 aa30.16■■■□□ 2.42
NEK9-203ENST00000553945 AFDNP55196 1824 aaKnown RBP30.16■■■□□ 2.42
NEK9-203ENST00000553945 SERPINB2P05120 415 aa30.15■■■□□ 2.42
NEK9-203ENST00000553945 CLEC4GQ6UXB4 293 aa30.14■■■□□ 2.42
NEK9-203ENST00000553945 PELP1Q8IZL8 1130 aaKnown RBP30.14■■■□□ 2.42
NEK9-203ENST00000553945 C8orf58Q8NAV2 365 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms