RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 CHL1O00533 1208 aa15.27■□□□□ 0.04
PSMC6-204ENST00000553798 SSFA2P28290 1259 aa15.27■□□□□ 0.04
PSMC6-204ENST00000553798 CRKLP46109 303 aaKnown RBP15.27■□□□□ 0.04
PSMC6-204ENST00000553798 INTS5Q6P9B9 1019 aaKnown RBP15.27■□□□□ 0.04
PSMC6-204ENST00000553798 AMIGO3Q86WK7 504 aa15.27■□□□□ 0.04
PSMC6-204ENST00000553798 SLC16A10Q8TF71 515 aa15.27■□□□□ 0.04
PSMC6-204ENST00000553798 MYH14Q7Z406 1995 aaKnown RBP15.27■□□□□ 0.03
PSMC6-204ENST00000553798 UBR3Q6ZT12 1888 aa15.27■□□□□ 0.03
PSMC6-204ENST00000553798 GNPATO15228 680 aa15.26■□□□□ 0.03
PSMC6-204ENST00000553798 RPS6KA4O75676 772 aa15.26■□□□□ 0.03
PSMC6-204ENST00000553798 STARD3NLO95772 234 aa15.26■□□□□ 0.03
PSMC6-204ENST00000553798 SNRPA1P09661 255 aaKnown RBP15.26■□□□□ 0.03
PSMC6-204ENST00000553798 EIF4A1P60842 406 aaKnown RBP15.26■□□□□ 0.03
PSMC6-204ENST00000553798 CALD1Q05682 793 aaKnown RBP15.26■□□□□ 0.03
PSMC6-204ENST00000553798 COL23A1Q86Y22 540 aaPredicted RBP15.26■□□□□ 0.03
PSMC6-204ENST00000553798 NGEFQ8N5V2 710 aa15.26■□□□□ 0.03
PSMC6-204ENST00000553798 ZNF853P0CG23 659 aa15.25■□□□□ 0.03
PSMC6-204ENST00000553798 CFAP44Q96MT7 982 aa15.25■□□□□ 0.03
PSMC6-204ENST00000553798 CCDC87Q9NVE4 849 aa15.25■□□□□ 0.03
PSMC6-204ENST00000553798 ZNF219Q9P2Y4 722 aaPredicted RBP15.25■□□□□ 0.03
PSMC6-204ENST00000553798 RTCBQ9Y3I0 505 aaKnown RBP15.25■□□□□ 0.03
PSMC6-204ENST00000553798 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.24■□□□□ 0.03
PSMC6-204ENST00000553798 WWC1Q8IX03 1113 aa15.24■□□□□ 0.03
PSMC6-204ENST00000553798 MTFR1LQ9H019 292 aa15.24■□□□□ 0.03
PSMC6-204ENST00000553798 TSPYL4Q9UJ04 414 aa15.24■□□□□ 0.03
PSMC6-204ENST00000553798 GIGYF1O75420 1035 aaPredicted RBP15.23■□□□□ 0.03
PSMC6-204ENST00000553798 IFT57Q9NWB7 429 aa15.23■□□□□ 0.03
PSMC6-204ENST00000553798 USP16Q9Y5T5 823 aa15.23■□□□□ 0.03
PSMC6-204ENST00000553798 TRAPPC3LQ5T215 181 aa15.22■□□□□ 0.03
PSMC6-204ENST00000553798 SMIM5Q71RC9 77 aa15.22■□□□□ 0.03
PSMC6-204ENST00000553798 SPON1Q9HCB6 807 aa15.22■□□□□ 0.03
PSMC6-204ENST00000553798 LRP5O75197 1615 aa15.21■□□□□ 0.03
PSMC6-204ENST00000553798 SOS1Q07889 1333 aaPredicted RBP15.21■□□□□ 0.03
PSMC6-204ENST00000553798 IL16Q14005 1332 aa15.21■□□□□ 0.03
PSMC6-204ENST00000553798 PRAMEF22A3QJZ6 481 aa15.21■□□□□ 0.03
PSMC6-204ENST00000553798 ZBTB7AO95365 584 aa15.21■□□□□ 0.03
PSMC6-204ENST00000553798 GNAI1P63096 354 aa15.21■□□□□ 0.03
PSMC6-204ENST00000553798 ARHGEF1Q92888 912 aaKnown RBP15.21■□□□□ 0.03
PSMC6-204ENST00000553798 SGIP1Q9BQI5 828 aa15.21■□□□□ 0.03
PSMC6-204ENST00000553798 ZBTB1Q9Y2K1 713 aa15.21■□□□□ 0.03
PSMC6-204ENST00000553798 COL24A1Q17RW2 1714 aa15.2■□□□□ 0.02
PSMC6-204ENST00000553798 PHF14O94880 888 aa15.2■□□□□ 0.02
PSMC6-204ENST00000553798 PTGER2P43116 358 aa15.2■□□□□ 0.02
PSMC6-204ENST00000553798 WDR63Q8IWG1 891 aa15.2■□□□□ 0.02
PSMC6-204ENST00000553798 ABCB7O75027 752 aa15.19■□□□□ 0.02
PSMC6-204ENST00000553798 A1BGP04217 495 aa15.19■□□□□ 0.02
PSMC6-204ENST00000553798 EIF5P55010 431 aaKnown RBP15.19■□□□□ 0.02
PSMC6-204ENST00000553798 MBIPQ9NS73 344 aa15.19■□□□□ 0.02
PSMC6-204ENST00000553798 ATF5Q9Y2D1 282 aaPredicted RBP15.19■□□□□ 0.02
PSMC6-204ENST00000553798 LAS1LQ9Y4W2 734 aaKnown RBP15.19■□□□□ 0.02
PSMC6-204ENST00000553798 SRCAPQ6ZRS2 3230 aa15.18■□□□□ 0.02
PSMC6-204ENST00000553798 SENP3-EIF4A1A0A087X0R7 540 aa15.18■□□□□ 0.02
PSMC6-204ENST00000553798 RFC4P35249 363 aa15.18■□□□□ 0.02
PSMC6-204ENST00000553798 IL6STP40189 918 aaPredicted RBP15.18■□□□□ 0.02
PSMC6-204ENST00000553798 ZNF521Q96K83 1311 aa15.17■□□□□ 0.02
PSMC6-204ENST00000553798 HOXB7P09629 217 aa15.17■□□□□ 0.02
PSMC6-204ENST00000553798 CANXP27824 592 aaKnown RBP15.17■□□□□ 0.02
PSMC6-204ENST00000553798 LAMB4A4D0S4 1761 aa15.16■□□□□ 0.02
PSMC6-204ENST00000553798 COL15A1P39059 1388 aa15.16■□□□□ 0.02
PSMC6-204ENST00000553798 NBPF26B4DH59 902 aa15.16■□□□□ 0.02
PSMC6-204ENST00000553798 NBPF10Q6P3W6 841 aaKnown RBP15.16■□□□□ 0.02
PSMC6-204ENST00000553798 NBPF15Q8N660 670 aa15.16■□□□□ 0.02
PSMC6-204ENST00000553798 ERBB4Q15303 1308 aa15.16■□□□□ 0.02
PSMC6-204ENST00000553798 USP42Q9H9J4 1324 aaKnown RBP15.16■□□□□ 0.02
PSMC6-204ENST00000553798 C4AP0C0L4 1744 aa15.15■□□□□ 0.02
PSMC6-204ENST00000553798 A0A087WZG4 1122 aa15.15■□□□□ 0.02
PSMC6-204ENST00000553798 GYS1P13807 737 aa15.15■□□□□ 0.02
PSMC6-204ENST00000553798 KRT24Q2M2I5 525 aa15.15■□□□□ 0.02
PSMC6-204ENST00000553798 NLGN1Q8N2Q7 840 aa15.15■□□□□ 0.02
PSMC6-204ENST00000553798 NARFQ9UHQ1 456 aa15.15■□□□□ 0.02
PSMC6-204ENST00000553798 SALL2Q9Y467 1007 aaPredicted RBP15.15■□□□□ 0.02
PSMC6-204ENST00000553798 POLD1P28340 1107 aa15.13■□□□□ 0.01
PSMC6-204ENST00000553798 DUSP27Q5VZP5 1158 aa15.13■□□□□ 0.01
PSMC6-204ENST00000553798 MSL1Q68DK7 614 aa15.13■□□□□ 0.01
PSMC6-204ENST00000553798 SRP68Q9UHB9 627 aaKnown RBP15.13■□□□□ 0.01
PSMC6-204ENST00000553798 RGL2O15211 777 aa15.12■□□□□ 0.01
PSMC6-204ENST00000553798 ZPR1O75312 459 aa15.12■□□□□ 0.01
PSMC6-204ENST00000553798 PDIA6Q15084 440 aa15.12■□□□□ 0.01
PSMC6-204ENST00000553798 LRP10Q7Z4F1 713 aa15.12■□□□□ 0.01
PSMC6-204ENST00000553798 C8orf58Q8NAV2 365 aa15.12■□□□□ 0.01
PSMC6-204ENST00000553798 TSR2Q969E8 191 aaKnown RBP15.12■□□□□ 0.01
PSMC6-204ENST00000553798 ARXQ96QS3 562 aa15.12■□□□□ 0.01
PSMC6-204ENST00000553798 EIF2S2P20042 333 aaKnown RBP15.11■□□□□ 0.01
PSMC6-204ENST00000553798 PIP4K2AP48426 406 aaPredicted RBP15.11■□□□□ 0.01
PSMC6-204ENST00000553798 USPL1Q5W0Q7 1092 aa15.11■□□□□ 0.01
PSMC6-204ENST00000553798 NPM2Q86SE8 214 aaKnown RBP15.11■□□□□ 0.01
PSMC6-204ENST00000553798 BCL2L12Q9HB09 334 aa15.11■□□□□ 0.01
PSMC6-204ENST00000553798 CAMTA2O94983 1202 aa15.1■□□□□ 0.01
PSMC6-204ENST00000553798 TM4SF1P30408 202 aa15.1■□□□□ 0.01
PSMC6-204ENST00000553798 FKBP8Q14318 412 aa15.1■□□□□ 0.01
PSMC6-204ENST00000553798 DZIP3Q86Y13 1208 aaKnown RBP15.1■□□□□ 0.01
PSMC6-204ENST00000553798 CHMP4AQ9BY43 222 aa15.1■□□□□ 0.01
PSMC6-204ENST00000553798 TBC1D2BQ9UPU7 963 aa15.1■□□□□ 0.01
PSMC6-204ENST00000553798 FANCIQ9NVI1 1328 aa15.1■□□□□ 0.01
PSMC6-204ENST00000553798 MMP10P09238 476 aa15.09■□□□□ 0.01
PSMC6-204ENST00000553798 HDGFL1Q5TGJ6 251 aa15.09■□□□□ 0.01
PSMC6-204ENST00000553798 TSPYL6Q8N831 410 aa15.09■□□□□ 0.01
PSMC6-204ENST00000553798 MYH16Q9H6N6 1097 aa15.09■□□□□ 0.01
PSMC6-204ENST00000553798 DDX21Q9NR30 783 aaKnown RBP eCLIP15.09■□□□□ 0.01
PSMC6-204ENST00000553798 PPP1R1BQ9UD71 204 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms