RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 VAMP4O75379 141 aa23.33■■□□□ 1.33
PSEN1-208ENST00000553719 CYP19A1P11511 503 aaPredicted RBP23.33■■□□□ 1.33
PSEN1-208ENST00000553719 TWISTNBQ3B726 338 aaPredicted RBP23.33■■□□□ 1.33
PSEN1-208ENST00000553719 CNTNAP4Q9C0A0 1308 aa23.32■■□□□ 1.32
PSEN1-208ENST00000553719 ELL2O00472 640 aaPredicted RBP23.31■■□□□ 1.32
PSEN1-208ENST00000553719 CT47B1P0C2W7 299 aaPredicted RBP23.31■■□□□ 1.32
PSEN1-208ENST00000553719 UBR3Q6ZT12 1888 aa23.3■■□□□ 1.32
PSEN1-208ENST00000553719 INTS5Q6P9B9 1019 aaKnown RBP23.29■■□□□ 1.32
PSEN1-208ENST00000553719 ERBB4Q15303 1308 aa23.29■■□□□ 1.32
PSEN1-208ENST00000553719 TUBGCP6Q96RT7 1819 aa23.29■■□□□ 1.32
PSEN1-208ENST00000553719 STARD3NLO95772 234 aa23.28■■□□□ 1.32
PSEN1-208ENST00000553719 PDIA6Q15084 440 aa23.28■■□□□ 1.32
PSEN1-208ENST00000553719 RC3H1Q5TC82 1133 aaKnown RBP23.28■■□□□ 1.32
PSEN1-208ENST00000553719 CRKLP46109 303 aaKnown RBP23.27■■□□□ 1.32
PSEN1-208ENST00000553719 HDGFL1Q5TGJ6 251 aa23.27■■□□□ 1.32
PSEN1-208ENST00000553719 AKT1S1Q96B36 256 aa23.27■■□□□ 1.32
PSEN1-208ENST00000553719 QSER1Q2KHR3 1735 aa23.26■■□□□ 1.31
PSEN1-208ENST00000553719 NBPF26B4DH59 902 aa23.26■■□□□ 1.31
PSEN1-208ENST00000553719 NBPF14Q5TI25 921 aa23.26■■□□□ 1.31
PSEN1-208ENST00000553719 NBPF10Q6P3W6 841 aaKnown RBP23.26■■□□□ 1.31
PSEN1-208ENST00000553719 LRP10Q7Z4F1 713 aa23.26■■□□□ 1.31
PSEN1-208ENST00000553719 NBPF15Q8N660 670 aa23.26■■□□□ 1.31
PSEN1-208ENST00000553719 ZNF428Q96B54 188 aa23.26■■□□□ 1.31
PSEN1-208ENST00000553719 CCDC87Q9NVE4 849 aa23.26■■□□□ 1.31
PSEN1-208ENST00000553719 ZBTB1Q9Y2K1 713 aa23.26■■□□□ 1.31
PSEN1-208ENST00000553719 A1BGP04217 495 aa23.25■■□□□ 1.31
PSEN1-208ENST00000553719 HMGB2P26583 209 aaKnown RBP23.25■■□□□ 1.31
PSEN1-208ENST00000553719 ZNF827Q17R98 1081 aa23.25■■□□□ 1.31
PSEN1-208ENST00000553719 ANO8Q9HCE9 1232 aaPredicted RBP23.25■■□□□ 1.31
PSEN1-208ENST00000553719 CACNA1FO60840 1977 aa23.24■■□□□ 1.31
PSEN1-208ENST00000553719 EIF2S2P20042 333 aaKnown RBP23.24■■□□□ 1.31
PSEN1-208ENST00000553719 PROSER3Q2NL68 480 aa23.23■■□□□ 1.31
PSEN1-208ENST00000553719 AMIGO3Q86WK7 504 aa23.23■■□□□ 1.31
PSEN1-208ENST00000553719 CHPF2Q9P2E5 772 aa23.23■■□□□ 1.31
PSEN1-208ENST00000553719 CCDC30Q5VVM6 783 aa23.22■■□□□ 1.31
PSEN1-208ENST00000553719 NECTIN2Q92692 538 aa23.22■■□□□ 1.31
PSEN1-208ENST00000553719 CHMP4AQ9BY43 222 aa23.22■■□□□ 1.31
PSEN1-208ENST00000553719 DDX21Q9NR30 783 aaKnown RBP eCLIP23.22■■□□□ 1.31
PSEN1-208ENST00000553719 C4AP0C0L4 1744 aa23.22■■□□□ 1.31
PSEN1-208ENST00000553719 IL6STP40189 918 aaPredicted RBP23.21■■□□□ 1.31
PSEN1-208ENST00000553719 PIP4K2AP48426 406 aaPredicted RBP23.21■■□□□ 1.31
PSEN1-208ENST00000553719 DBF4Q9UBU7 674 aaPredicted RBP23.21■■□□□ 1.31
PSEN1-208ENST00000553719 SOCS7O14512 581 aa23.2■■□□□ 1.3
PSEN1-208ENST00000553719 RPS6KA4O75676 772 aa23.2■■□□□ 1.3
PSEN1-208ENST00000553719 RARSP54136 660 aaKnown RBP23.2■■□□□ 1.3
PSEN1-208ENST00000553719 EIF5P55010 431 aaKnown RBP23.2■■□□□ 1.3
PSEN1-208ENST00000553719 ALDH1L2Q3SY69 923 aa23.2■■□□□ 1.3
PSEN1-208ENST00000553719 SSH1Q8WYL5 1049 aa23.2■■□□□ 1.3
PSEN1-208ENST00000553719 AK7Q96M32 723 aa23.19■■□□□ 1.3
PSEN1-208ENST00000553719 COL15A1P39059 1388 aa23.18■■□□□ 1.3
PSEN1-208ENST00000553719 GNPATO15228 680 aa23.18■■□□□ 1.3
PSEN1-208ENST00000553719 ANXA1P04083 346 aa23.18■■□□□ 1.3
PSEN1-208ENST00000553719 CANXP27824 592 aaKnown RBP23.18■■□□□ 1.3
PSEN1-208ENST00000553719 BRPF1P55201 1214 aaPredicted RBP23.18■■□□□ 1.3
PSEN1-208ENST00000553719 SLC15A2Q16348 729 aa23.18■■□□□ 1.3
PSEN1-208ENST00000553719 TCERG1O14776 1098 aaKnown RBP23.17■■□□□ 1.3
PSEN1-208ENST00000553719 MRPL50Q8N5N7 158 aaKnown RBP23.17■■□□□ 1.3
PSEN1-208ENST00000553719 BCORQ6W2J9 1755 aa23.17■■□□□ 1.3
PSEN1-208ENST00000553719 SCN7AQ01118 1682 aa23.16■■□□□ 1.3
PSEN1-208ENST00000553719 SSFA2P28290 1259 aa23.16■■□□□ 1.3
PSEN1-208ENST00000553719 STK31Q9BXU1 1019 aa23.16■■□□□ 1.3
PSEN1-208ENST00000553719 HYPKQ9NX55 129 aa23.16■■□□□ 1.3
PSEN1-208ENST00000553719 MYL6BP14649 208 aa23.15■■□□□ 1.3
PSEN1-208ENST00000553719 STK32BQ9NY57 414 aa23.15■■□□□ 1.3
PSEN1-208ENST00000553719 RTCBQ9Y3I0 505 aaKnown RBP23.15■■□□□ 1.3
PSEN1-208ENST00000553719 PNPLA7Q6ZV29 1317 aa23.14■■□□□ 1.3
PSEN1-208ENST00000553719 SLC4A2P04920 1241 aa23.14■■□□□ 1.29
PSEN1-208ENST00000553719 ADRA2BP18089 450 aa23.14■■□□□ 1.29
PSEN1-208ENST00000553719 SMIM5Q71RC9 77 aa23.14■■□□□ 1.29
PSEN1-208ENST00000553719 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.13■■□□□ 1.29
PSEN1-208ENST00000553719 G2E3Q7L622 706 aa23.13■■□□□ 1.29
PSEN1-208ENST00000553719 BCL2L13Q9BXK5 485 aa23.13■■□□□ 1.29
PSEN1-208ENST00000553719 PHAXQ9H814 394 aaKnown RBP23.13■■□□□ 1.29
PSEN1-208ENST00000553719 CASZ1Q86V15 1759 aa23.12■■□□□ 1.29
PSEN1-208ENST00000553719 SMC4Q9NTJ3 1288 aa23.12■■□□□ 1.29
PSEN1-208ENST00000553719 TFCP2L1Q9NZI6 479 aa23.12■■□□□ 1.29
PSEN1-208ENST00000553719 RCAN3Q9UKA8 241 aa23.12■■□□□ 1.29
PSEN1-208ENST00000553719 BCAR3O75815 825 aa23.11■■□□□ 1.29
PSEN1-208ENST00000553719 TTLL7Q6ZT98 887 aa23.11■■□□□ 1.29
PSEN1-208ENST00000553719 XAGE3Q8WTP9 111 aa23.11■■□□□ 1.29
PSEN1-208ENST00000553719 ARFGEF2Q9Y6D5 1785 aa23.1■■□□□ 1.29
PSEN1-208ENST00000553719 FLIIQ13045 1269 aa23.1■■□□□ 1.29
PSEN1-208ENST00000553719 COPS6Q7L5N1 327 aa23.1■■□□□ 1.29
PSEN1-208ENST00000553719 ARHGEF1Q92888 912 aaKnown RBP23.1■■□□□ 1.29
PSEN1-208ENST00000553719 A0A087WZG4 1122 aa23.09■■□□□ 1.29
PSEN1-208ENST00000553719 PHF14O94880 888 aa23.09■■□□□ 1.29
PSEN1-208ENST00000553719 TRAPPC3LQ5T215 181 aa23.09■■□□□ 1.29
PSEN1-208ENST00000553719 FLAD1Q8NFF5 587 aa23.09■■□□□ 1.29
PSEN1-208ENST00000553719 USP42Q9H9J4 1324 aaKnown RBP23.08■■□□□ 1.29
PSEN1-208ENST00000553719 CAMTA2O94983 1202 aa23.08■■□□□ 1.29
PSEN1-208ENST00000553719 COL23A1Q86Y22 540 aaPredicted RBP23.08■■□□□ 1.29
PSEN1-208ENST00000553719 NARFQ9UHQ1 456 aa23.08■■□□□ 1.29
PSEN1-208ENST00000553719 ADCY9O60503 1353 aa23.08■■□□□ 1.29
PSEN1-208ENST00000553719 KIF16BQ96L93 1317 aa23.08■■□□□ 1.28
PSEN1-208ENST00000553719 RGL2O15211 777 aa23.07■■□□□ 1.28
PSEN1-208ENST00000553719 DZIP3Q86Y13 1208 aaKnown RBP23.07■■□□□ 1.28
PSEN1-208ENST00000553719 ZNF330Q9Y3S2 320 aaPredicted RBP23.07■■□□□ 1.28
PSEN1-208ENST00000553719 MAP3K15Q6ZN16 1313 aa23.07■■□□□ 1.28
PSEN1-208ENST00000553719 NUP98P52948 1817 aa23.06■■□□□ 1.28
PSEN1-208ENST00000553719 BCL2L12Q9HB09 334 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms