RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-222ENST00000553154 MIS18AQ9NYP9 233 aa13.32□□□□□ -0.28
CALCOCO1-222ENST00000553154 LAMB4A4D0S4 1761 aa13.32□□□□□ -0.28
CALCOCO1-222ENST00000553154 SENP3-EIF4A1A0A087X0R7 540 aa13.31□□□□□ -0.28
CALCOCO1-222ENST00000553154 ZBTB7AO95365 584 aa13.31□□□□□ -0.28
CALCOCO1-222ENST00000553154 ADRA2BP18089 450 aa13.31□□□□□ -0.28
CALCOCO1-222ENST00000553154 FLAD1Q8NFF5 587 aa13.31□□□□□ -0.28
CALCOCO1-222ENST00000553154 CCDC87Q9NVE4 849 aa13.31□□□□□ -0.28
CALCOCO1-222ENST00000553154 ZBTB1Q9Y2K1 713 aa13.31□□□□□ -0.28
CALCOCO1-222ENST00000553154 SPON1Q9HCB6 807 aa13.3□□□□□ -0.28
CALCOCO1-222ENST00000553154 GIGYF1O75420 1035 aaPredicted RBP13.29□□□□□ -0.28
CALCOCO1-222ENST00000553154 SNRPA1P09661 255 aaKnown RBP13.29□□□□□ -0.28
CALCOCO1-222ENST00000553154 EIF5P55010 431 aaKnown RBP13.29□□□□□ -0.28
CALCOCO1-222ENST00000553154 NEUROD2Q15784 382 aa13.29□□□□□ -0.28
CALCOCO1-222ENST00000553154 DIEXFQ68CQ4 756 aaKnown RBP13.29□□□□□ -0.28
CALCOCO1-222ENST00000553154 USP16Q9Y5T5 823 aa13.29□□□□□ -0.28
CALCOCO1-222ENST00000553154 ARHGEF1Q92888 912 aaKnown RBP13.28□□□□□ -0.28
CALCOCO1-222ENST00000553154 CFAP44Q96MT7 982 aa13.28□□□□□ -0.28
CALCOCO1-222ENST00000553154 TEX13AQ9BXU3 409 aaPredicted RBP13.28□□□□□ -0.28
CALCOCO1-222ENST00000553154 RTCBQ9Y3I0 505 aaKnown RBP13.28□□□□□ -0.28
CALCOCO1-222ENST00000553154 ZNF521Q96K83 1311 aa13.28□□□□□ -0.28
CALCOCO1-222ENST00000553154 USP42Q9H9J4 1324 aaKnown RBP13.28□□□□□ -0.28
CALCOCO1-222ENST00000553154 SCN7AQ01118 1682 aa13.28□□□□□ -0.28
CALCOCO1-222ENST00000553154 NBPF26B4DH59 902 aa13.27□□□□□ -0.29
CALCOCO1-222ENST00000553154 PHF14O94880 888 aa13.27□□□□□ -0.29
CALCOCO1-222ENST00000553154 NBPF10Q6P3W6 841 aaKnown RBP13.27□□□□□ -0.29
CALCOCO1-222ENST00000553154 LRP10Q7Z4F1 713 aa13.27□□□□□ -0.29
CALCOCO1-222ENST00000553154 WWC1Q8IX03 1113 aa13.27□□□□□ -0.29
CALCOCO1-222ENST00000553154 NBPF15Q8N660 670 aa13.27□□□□□ -0.29
CALCOCO1-222ENST00000553154 ATF5Q9Y2D1 282 aaPredicted RBP13.27□□□□□ -0.29
CALCOCO1-222ENST00000553154 COL15A1P39059 1388 aa13.27□□□□□ -0.29
CALCOCO1-222ENST00000553154 STARD3NLO95772 234 aa13.26□□□□□ -0.29
CALCOCO1-222ENST00000553154 GYS1P13807 737 aa13.26□□□□□ -0.29
CALCOCO1-222ENST00000553154 MIER1Q8N108 512 aa13.26□□□□□ -0.29
CALCOCO1-222ENST00000553154 BCL2L12Q9HB09 334 aa13.26□□□□□ -0.29
CALCOCO1-222ENST00000553154 MBIPQ9NS73 344 aa13.26□□□□□ -0.29
CALCOCO1-222ENST00000553154 IFT57Q9NWB7 429 aa13.26□□□□□ -0.29
CALCOCO1-222ENST00000553154 TSPYL4Q9UJ04 414 aa13.26□□□□□ -0.29
CALCOCO1-222ENST00000553154 IL16Q14005 1332 aa13.25□□□□□ -0.29
CALCOCO1-222ENST00000553154 A1BGP04217 495 aa13.25□□□□□ -0.29
CALCOCO1-222ENST00000553154 IL6STP40189 918 aaPredicted RBP13.25□□□□□ -0.29
CALCOCO1-222ENST00000553154 KRT24Q2M2I5 525 aa13.25□□□□□ -0.29
CALCOCO1-222ENST00000553154 TRAPPC3LQ5T215 181 aa13.25□□□□□ -0.29
CALCOCO1-222ENST00000553154 FAM9BQ8IZU0 186 aa13.25□□□□□ -0.29
CALCOCO1-222ENST00000553154 ZNF784Q8NCA9 323 aaPredicted RBP13.25□□□□□ -0.29
CALCOCO1-222ENST00000553154 PDIA6Q15084 440 aa13.24□□□□□ -0.29
CALCOCO1-222ENST00000553154 SRP68Q9UHB9 627 aaKnown RBP13.24□□□□□ -0.29
CALCOCO1-222ENST00000553154 BCORQ6W2J9 1755 aa13.24□□□□□ -0.29
CALCOCO1-222ENST00000553154 ERBB4Q15303 1308 aa13.23□□□□□ -0.29
CALCOCO1-222ENST00000553154 MSL1Q68DK7 614 aa13.23□□□□□ -0.29
CALCOCO1-222ENST00000553154 NGEFQ8N5V2 710 aa13.23□□□□□ -0.29
CALCOCO1-222ENST00000553154 NARFQ9UHQ1 456 aa13.23□□□□□ -0.29
CALCOCO1-222ENST00000553154 DCAF8L1A6NGE4 600 aa13.22□□□□□ -0.29
CALCOCO1-222ENST00000553154 HOXB7P09629 217 aa13.22□□□□□ -0.29
CALCOCO1-222ENST00000553154 CANXP27824 592 aaKnown RBP13.22□□□□□ -0.29
CALCOCO1-222ENST00000553154 GNAI1P63096 354 aa13.22□□□□□ -0.29
CALCOCO1-222ENST00000553154 CALD1Q05682 793 aaKnown RBP13.22□□□□□ -0.29
CALCOCO1-222ENST00000553154 RGL2O15211 777 aa13.21□□□□□ -0.29
CALCOCO1-222ENST00000553154 CAMTA2O94983 1202 aa13.21□□□□□ -0.29
CALCOCO1-222ENST00000553154 PIP4K2AP48426 406 aaPredicted RBP13.21□□□□□ -0.29
CALCOCO1-222ENST00000553154 C1QTNF8P60827 252 aa13.21□□□□□ -0.29
CALCOCO1-222ENST00000553154 DDR1Q08345 913 aa13.21□□□□□ -0.29
CALCOCO1-222ENST00000553154 FKBP8Q14318 412 aa13.21□□□□□ -0.29
CALCOCO1-222ENST00000553154 WDR63Q8IWG1 891 aa13.21□□□□□ -0.29
CALCOCO1-222ENST00000553154 ARXQ96QS3 562 aa13.21□□□□□ -0.29
CALCOCO1-222ENST00000553154 SPINK5Q9NQ38 1064 aaPredicted RBP13.21□□□□□ -0.29
CALCOCO1-222ENST00000553154 NRXN2Q9P2S2 1712 aa13.21□□□□□ -0.3
CALCOCO1-222ENST00000553154 C10orf71Q711Q0 1435 aa13.21□□□□□ -0.3
CALCOCO1-222ENST00000553154 KIAA1551Q9HCM1 1747 aa13.2□□□□□ -0.3
CALCOCO1-222ENST00000553154 TM4SF1P30408 202 aa13.2□□□□□ -0.3
CALCOCO1-222ENST00000553154 RFC4P35249 363 aa13.2□□□□□ -0.3
CALCOCO1-222ENST00000553154 USPL1Q5W0Q7 1092 aa13.2□□□□□ -0.3
CALCOCO1-222ENST00000553154 NLGN1Q8N2Q7 840 aa13.2□□□□□ -0.3
CALCOCO1-222ENST00000553154 MSH5O43196 834 aa13.19□□□□□ -0.3
CALCOCO1-222ENST00000553154 MMP10P09238 476 aa13.19□□□□□ -0.3
CALCOCO1-222ENST00000553154 PROSER3Q2NL68 480 aa13.19□□□□□ -0.3
CALCOCO1-222ENST00000553154 C8orf58Q8NAV2 365 aa13.19□□□□□ -0.3
CALCOCO1-222ENST00000553154 FHDC1Q9C0D6 1143 aaPredicted RBP13.19□□□□□ -0.3
CALCOCO1-222ENST00000553154 KIF13BQ9NQT8 1826 aa13.18□□□□□ -0.3
CALCOCO1-222ENST00000553154 FANCIQ9NVI1 1328 aa13.18□□□□□ -0.3
CALCOCO1-222ENST00000553154 A0A087WZG4 1122 aa13.18□□□□□ -0.3
CALCOCO1-222ENST00000553154 POLD1P28340 1107 aa13.18□□□□□ -0.3
CALCOCO1-222ENST00000553154 DUSP27Q5VZP5 1158 aa13.18□□□□□ -0.3
CALCOCO1-222ENST00000553154 TSR2Q969E8 191 aaKnown RBP13.18□□□□□ -0.3
CALCOCO1-222ENST00000553154 PPP1R1BQ9UD71 204 aaPredicted RBP13.18□□□□□ -0.3
CALCOCO1-222ENST00000553154 POLRMTO00411 1230 aaKnown RBP13.17□□□□□ -0.3
CALCOCO1-222ENST00000553154 NFIXQ14938 502 aa13.17□□□□□ -0.3
CALCOCO1-222ENST00000553154 TSPYL6Q8N831 410 aa13.17□□□□□ -0.3
CALCOCO1-222ENST00000553154 SYT17Q9BSW7 474 aa13.17□□□□□ -0.3
CALCOCO1-222ENST00000553154 TBC1D2BQ9UPU7 963 aa13.17□□□□□ -0.3
CALCOCO1-222ENST00000553154 LAS1LQ9Y4W2 734 aaKnown RBP13.17□□□□□ -0.3
CALCOCO1-222ENST00000553154 ATP10DQ9P241 1426 aa13.16□□□□□ -0.3
CALCOCO1-222ENST00000553154 DZIP3Q86Y13 1208 aaKnown RBP13.16□□□□□ -0.3
CALCOCO1-222ENST00000553154 DDX21Q9NR30 783 aaKnown RBP eCLIP13.16□□□□□ -0.3
CALCOCO1-222ENST00000553154 PXDNLA1KZ92 1463 aa13.16□□□□□ -0.3
CALCOCO1-222ENST00000553154 ZPR1O75312 459 aa13.15□□□□□ -0.3
CALCOCO1-222ENST00000553154 TBC1D9BQ66K14 1250 aa13.15□□□□□ -0.3
CALCOCO1-222ENST00000553154 TTLL7Q6ZT98 887 aa13.15□□□□□ -0.3
CALCOCO1-222ENST00000553154 CD2APQ9Y5K6 639 aa13.15□□□□□ -0.3
CALCOCO1-222ENST00000553154 ERVV-1B6SEH8 477 aa13.14□□□□□ -0.31
CALCOCO1-222ENST00000553154 ANXA1P04083 346 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms