RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 CNTNAP5Q8WYK1 1306 aa6.36□□□□□ -1.39
USP44-208ENST00000552440 POM121CA8CG34 1229 aa6.36□□□□□ -1.39
USP44-208ENST00000552440 TBC1D9Q6ZT07 1266 aa6.36□□□□□ -1.39
USP44-208ENST00000552440 WWC1Q8IX03 1113 aa6.36□□□□□ -1.39
USP44-208ENST00000552440 PHTF2Q8N3S3 785 aa6.36□□□□□ -1.39
USP44-208ENST00000552440 CRISPLD1Q9H336 500 aa6.36□□□□□ -1.39
USP44-208ENST00000552440 GPAMQ9HCL2 828 aa6.36□□□□□ -1.39
USP44-208ENST00000552440 CHIC2Q9UKJ5 165 aa6.36□□□□□ -1.39
USP44-208ENST00000552440 MSX1P28360 303 aa6.35□□□□□ -1.39
USP44-208ENST00000552440 ABL2P42684 1182 aa6.35□□□□□ -1.39
USP44-208ENST00000552440 PHKA2P46019 1235 aa6.35□□□□□ -1.39
USP44-208ENST00000552440 TLR1Q15399 786 aa6.35□□□□□ -1.39
USP44-208ENST00000552440 C4orf17Q53FE4 359 aa6.35□□□□□ -1.39
USP44-208ENST00000552440 NLRP8Q86W28 1048 aa6.35□□□□□ -1.39
USP44-208ENST00000552440 GLMNQ92990 594 aa6.35□□□□□ -1.39
USP44-208ENST00000552440 KLRG1Q96E93 195 aa6.35□□□□□ -1.39
USP44-208ENST00000552440 CDCA7Q9BWT1 371 aaPredicted RBP6.35□□□□□ -1.39
USP44-208ENST00000552440 TBC1D2BQ9UPU7 963 aa6.35□□□□□ -1.39
USP44-208ENST00000552440 LZTS3O60299 673 aaPredicted RBP6.34□□□□□ -1.39
USP44-208ENST00000552440 BMP4P12644 408 aa6.34□□□□□ -1.39
USP44-208ENST00000552440 SEMA3FQ13275 785 aa6.34□□□□□ -1.39
USP44-208ENST00000552440 GALNT6Q8NCL4 622 aa6.34□□□□□ -1.39
USP44-208ENST00000552440 NIFKQ9BYG3 293 aaKnown RBP6.34□□□□□ -1.39
USP44-208ENST00000552440 EDARADDQ8WWZ3 215 aa6.34□□□□□ -1.4
USP44-208ENST00000552440 INHAP05111 366 aa6.33□□□□□ -1.4
USP44-208ENST00000552440 NBPF1Q3BBV0 1214 aa6.33□□□□□ -1.4
USP44-208ENST00000552440 PLA2G4EQ3MJ16 856 aa6.33□□□□□ -1.4
USP44-208ENST00000552440 OXLD1Q5BKU9 147 aa6.33□□□□□ -1.4
USP44-208ENST00000552440 PCDHGC4Q9Y5F7 938 aa6.33□□□□□ -1.4
USP44-208ENST00000552440 FGFR3P22607 806 aa6.32□□□□□ -1.4
USP44-208ENST00000552440 SLCO4C1Q6ZQN7 724 aa6.32□□□□□ -1.4
USP44-208ENST00000552440 FAM177A1Q8N128 213 aaPredicted RBP6.32□□□□□ -1.4
USP44-208ENST00000552440 RUBCNLQ9H714 662 aa6.32□□□□□ -1.4
USP44-208ENST00000552440 RRAGCQ9HB90 399 aa6.32□□□□□ -1.4
USP44-208ENST00000552440 ETNK1Q9HBU6 452 aa6.32□□□□□ -1.4
USP44-208ENST00000552440 ACIN1Q9UKV3 1341 aaKnown RBP6.32□□□□□ -1.4
USP44-208ENST00000552440 ARAFP10398 606 aa6.32□□□□□ -1.4
USP44-208ENST00000552440 TATP17735 454 aaPredicted RBP6.32□□□□□ -1.4
USP44-208ENST00000552440 AVENQ9NQS1 362 aaPredicted RBP6.32□□□□□ -1.4
USP44-208ENST00000552440 BACH1O14867 736 aa6.31□□□□□ -1.4
USP44-208ENST00000552440 AMPD1P23109 780 aa6.31□□□□□ -1.4
USP44-208ENST00000552440 SMTNP53814 917 aa6.31□□□□□ -1.4
USP44-208ENST00000552440 GDF10P55107 478 aa6.31□□□□□ -1.4
USP44-208ENST00000552440 NOP53Q9NZM5 478 aaKnown RBP6.31□□□□□ -1.4
USP44-208ENST00000552440 AMOTL2Q9Y2J4 779 aa6.31□□□□□ -1.4
USP44-208ENST00000552440 CDK2AP1O14519 115 aa6.3□□□□□ -1.4
USP44-208ENST00000552440 BRD2P25440 801 aaKnown RBP6.3□□□□□ -1.4
USP44-208ENST00000552440 PDE4CQ08493 712 aa6.3□□□□□ -1.4
USP44-208ENST00000552440 FAM182BQ5T319 152 aa6.3□□□□□ -1.4
USP44-208ENST00000552440 SPOCK3Q9BQ16 436 aa6.3□□□□□ -1.4
USP44-208ENST00000552440 ZDHHC3Q9NYG2 299 aa6.3□□□□□ -1.4
USP44-208ENST00000552440 GNB5O14775 395 aa6.29□□□□□ -1.4
USP44-208ENST00000552440 UBAP2LQ14157 1087 aaKnown RBP6.29□□□□□ -1.4
USP44-208ENST00000552440 PLPP7Q8NBV4 271 aa6.29□□□□□ -1.4
USP44-208ENST00000552440 ADAMTS19Q8TE59 1207 aa6.29□□□□□ -1.4
USP44-208ENST00000552440 PBXIP1Q96AQ6 731 aa6.29□□□□□ -1.4
USP44-208ENST00000552440 SLC4A9Q96Q91 983 aa6.29□□□□□ -1.4
USP44-208ENST00000552440 NDFIP2Q9NV92 336 aa6.29□□□□□ -1.4
USP44-208ENST00000552440 PATL2C9JE40 543 aaKnown RBP6.29□□□□□ -1.4
USP44-208ENST00000552440 PLA2G4AP47712 749 aa6.29□□□□□ -1.4
USP44-208ENST00000552440 NFATC2IPQ8NCF5 419 aa6.29□□□□□ -1.4
USP44-208ENST00000552440 AIDAQ96BJ3 306 aa6.29□□□□□ -1.4
USP44-208ENST00000552440 GJA3Q9Y6H8 435 aa6.29□□□□□ -1.4
USP44-208ENST00000552440 ATXN7O15265 892 aaPredicted RBP6.28□□□□□ -1.4
USP44-208ENST00000552440 BNIP3LO60238 219 aa6.28□□□□□ -1.4
USP44-208ENST00000552440 ADH6P28332 368 aa6.28□□□□□ -1.4
USP44-208ENST00000552440 VAC14Q08AM6 782 aa6.28□□□□□ -1.4
USP44-208ENST00000552440 EML3Q32P44 896 aa6.28□□□□□ -1.4
USP44-208ENST00000552440 ARSJQ5FYB0 599 aaPredicted RBP6.28□□□□□ -1.4
USP44-208ENST00000552440 HDGFL1Q5TGJ6 251 aa6.28□□□□□ -1.4
USP44-208ENST00000552440 DHX37Q8IY37 1157 aaKnown RBP6.28□□□□□ -1.4
USP44-208ENST00000552440 ABHD17AQ96GS6 310 aa6.28□□□□□ -1.4
USP44-208ENST00000552440 ZCCHC2Q9C0B9 1178 aaKnown RBP6.28□□□□□ -1.4
USP44-208ENST00000552440 GGA1Q9UJY5 639 aa6.28□□□□□ -1.4
USP44-208ENST00000552440 THBS1P07996 1170 aa6.27□□□□□ -1.41
USP44-208ENST00000552440 SRPK2P78362 688 aaKnown RBP6.27□□□□□ -1.41
USP44-208ENST00000552440 LAMC2Q13753 1193 aa6.27□□□□□ -1.41
USP44-208ENST00000552440 CFAP70Q5T0N1 1121 aa6.27□□□□□ -1.41
USP44-208ENST00000552440 POLR3GLQ9BT43 218 aa6.27□□□□□ -1.41
USP44-208ENST00000552440 NOD1Q9Y239 953 aa6.27□□□□□ -1.41
USP44-208ENST00000552440 GPC6Q9Y625 555 aaPredicted RBP6.27□□□□□ -1.41
USP44-208ENST00000552440 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.27□□□□□ -1.41
USP44-208ENST00000552440 A6NJY4 79 aa6.27□□□□□ -1.41
USP44-208ENST00000552440 SHISA8B8ZZ34 492 aa6.27□□□□□ -1.41
USP44-208ENST00000552440 ADAM23O75077 832 aa6.27□□□□□ -1.41
USP44-208ENST00000552440 EPXP11678 715 aa6.27□□□□□ -1.41
USP44-208ENST00000552440 SCNN1DP51172 638 aa6.27□□□□□ -1.41
USP44-208ENST00000552440 MTFR1Q15390 333 aa6.27□□□□□ -1.41
USP44-208ENST00000552440 TSGA10IPQ3SY00 556 aa6.27□□□□□ -1.41
USP44-208ENST00000552440 BTBD6Q96KE9 485 aa6.27□□□□□ -1.41
USP44-208ENST00000552440 SNRPNP63162 240 aaKnown RBP6.26□□□□□ -1.41
USP44-208ENST00000552440 SAMD5Q5TGI4 173 aa6.26□□□□□ -1.41
USP44-208ENST00000552440 USTQ9Y2C2 406 aa6.26□□□□□ -1.41
USP44-208ENST00000552440 A0A1W2PNR3 127 aa6.25□□□□□ -1.41
USP44-208ENST00000552440 SPDYE3A6NKU9 549 aa6.25□□□□□ -1.41
USP44-208ENST00000552440 BRD1O95696 1058 aa6.25□□□□□ -1.41
USP44-208ENST00000552440 CTBSQ01459 385 aa6.25□□□□□ -1.41
USP44-208ENST00000552440 NEUROD4Q9HD90 331 aa6.25□□□□□ -1.41
USP44-208ENST00000552440 FAM157BP0CG42 384 aa6.25□□□□□ -1.41
USP44-208ENST00000552440 RFX1P22670 979 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms