RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 PTGER2P43116 358 aa21.42■■□□□ 1.02
GCN1-209ENST00000551920 COL24A1Q17RW2 1714 aa21.42■■□□□ 1.02
GCN1-209ENST00000551920 CCDC27Q2M243 656 aa21.42■■□□□ 1.02
GCN1-209ENST00000551920 MTFR1LQ9H019 292 aa21.42■■□□□ 1.02
GCN1-209ENST00000551920 BABAM1Q9NWV8 329 aa21.42■■□□□ 1.02
GCN1-209ENST00000551920 ATF5Q9Y2D1 282 aaPredicted RBP21.42■■□□□ 1.02
GCN1-209ENST00000551920 USP16Q9Y5T5 823 aa21.42■■□□□ 1.02
GCN1-209ENST00000551920 MSH5O43196 834 aa21.41■■□□□ 1.02
GCN1-209ENST00000551920 SNRPA1P09661 255 aaKnown RBP21.41■■□□□ 1.02
GCN1-209ENST00000551920 ZNF853P0CG23 659 aa21.41■■□□□ 1.02
GCN1-209ENST00000551920 WWC1Q8IX03 1113 aa21.41■■□□□ 1.02
GCN1-209ENST00000551920 FLAD1Q8NFF5 587 aa21.41■■□□□ 1.02
GCN1-209ENST00000551920 SGIP1Q9BQI5 828 aa21.41■■□□□ 1.02
GCN1-209ENST00000551920 GIGYF1O75420 1035 aaPredicted RBP21.4■■□□□ 1.02
GCN1-209ENST00000551920 STARD3NLO95772 234 aa21.4■■□□□ 1.02
GCN1-209ENST00000551920 KRT24Q2M2I5 525 aa21.4■■□□□ 1.02
GCN1-209ENST00000551920 CFAP44Q96MT7 982 aa21.4■■□□□ 1.02
GCN1-209ENST00000551920 SPON1Q9HCB6 807 aa21.4■■□□□ 1.02
GCN1-209ENST00000551920 LAS1LQ9Y4W2 734 aaKnown RBP21.4■■□□□ 1.02
GCN1-209ENST00000551920 ADRA2BP18089 450 aa21.39■■□□□ 1.01
GCN1-209ENST00000551920 NCBP3Q53F19 620 aaKnown RBP21.39■■□□□ 1.01
GCN1-209ENST00000551920 MSL1Q68DK7 614 aa21.39■■□□□ 1.01
GCN1-209ENST00000551920 SLC16A10Q8TF71 515 aa21.39■■□□□ 1.01
GCN1-209ENST00000551920 ARHGEF1Q92888 912 aaKnown RBP21.39■■□□□ 1.01
GCN1-209ENST00000551920 TEX13AQ9BXU3 409 aaPredicted RBP21.39■■□□□ 1.01
GCN1-209ENST00000551920 MBIPQ9NS73 344 aa21.39■■□□□ 1.01
GCN1-209ENST00000551920 SALL2Q9Y467 1007 aaPredicted RBP21.39■■□□□ 1.01
GCN1-209ENST00000551920 COL15A1P39059 1388 aa21.38■■□□□ 1.01
GCN1-209ENST00000551920 A1BGP04217 495 aa21.38■■□□□ 1.01
GCN1-209ENST00000551920 IFT57Q9NWB7 429 aa21.38■■□□□ 1.01
GCN1-209ENST00000551920 CANXP27824 592 aaKnown RBP21.37■■□□□ 1.01
GCN1-209ENST00000551920 PIP4K2AP48426 406 aaPredicted RBP21.37■■□□□ 1.01
GCN1-209ENST00000551920 TRAPPC3LQ5T215 181 aa21.37■■□□□ 1.01
GCN1-209ENST00000551920 CALD1Q05682 793 aaKnown RBP21.36■■□□□ 1.01
GCN1-209ENST00000551920 SRP68Q9UHB9 627 aaKnown RBP21.36■■□□□ 1.01
GCN1-209ENST00000551920 NBPF26B4DH59 902 aa21.35■■□□□ 1.01
GCN1-209ENST00000551920 EIF5P55010 431 aaKnown RBP21.35■■□□□ 1.01
GCN1-209ENST00000551920 NBPF10Q6P3W6 841 aaKnown RBP21.35■■□□□ 1.01
GCN1-209ENST00000551920 NBPF15Q8N660 670 aa21.35■■□□□ 1.01
GCN1-209ENST00000551920 USP42Q9H9J4 1324 aaKnown RBP21.34■■□□□ 1.01
GCN1-209ENST00000551920 ZNF521Q96K83 1311 aa21.33■■□□□ 1.01
GCN1-209ENST00000551920 GYS1P13807 737 aa21.33■■□□□ 1.01
GCN1-209ENST00000551920 RFC4P35249 363 aa21.33■■□□□ 1.01
GCN1-209ENST00000551920 GNAI1P63096 354 aa21.33■■□□□ 1.01
GCN1-209ENST00000551920 SCN7AQ01118 1682 aa21.33■■□□□ 1
GCN1-209ENST00000551920 IL6STP40189 918 aaPredicted RBP21.32■■□□□ 1
GCN1-209ENST00000551920 TSR2Q969E8 191 aaKnown RBP21.32■■□□□ 1
GCN1-209ENST00000551920 IL16Q14005 1332 aa21.31■■□□□ 1
GCN1-209ENST00000551920 SPINK5Q9NQ38 1064 aaPredicted RBP21.31■■□□□ 1
GCN1-209ENST00000551920 ZNF330Q9Y3S2 320 aaPredicted RBP21.3■■□□□ 1
GCN1-209ENST00000551920 FKBP8Q14318 412 aa21.29■■□□□ 1
GCN1-209ENST00000551920 WDR63Q8IWG1 891 aa21.29■■□□□ 1
GCN1-209ENST00000551920 NGEFQ8N5V2 710 aa21.29■■□□□ 1
GCN1-209ENST00000551920 BCL2L12Q9HB09 334 aa21.29■■□□□ 1
GCN1-209ENST00000551920 FANCIQ9NVI1 1328 aa21.29■■□□□ 1
GCN1-209ENST00000551920 BCORQ6W2J9 1755 aa21.28■■□□□ 1
GCN1-209ENST00000551920 USPL1Q5W0Q7 1092 aa21.28■■□□□ 1
GCN1-209ENST00000551920 LRP10Q7Z4F1 713 aa21.28■■□□□ 1
GCN1-209ENST00000551920 C8orf58Q8NAV2 365 aa21.28■■□□□ 1
GCN1-209ENST00000551920 NARFQ9UHQ1 456 aa21.28■■□□□ 1
GCN1-209ENST00000551920 EIF2S2P20042 333 aaKnown RBP21.27■■□□□ 1
GCN1-209ENST00000551920 POLD1P28340 1107 aa21.27■■□□□ 1
GCN1-209ENST00000551920 PDIA6Q15084 440 aa21.27■■□□□ 1
GCN1-209ENST00000551920 PROSER3Q2NL68 480 aa21.27■■□□□ 1
GCN1-209ENST00000551920 DUSP27Q5VZP5 1158 aa21.27■■□□□ 1
GCN1-209ENST00000551920 NECTIN2Q92692 538 aa21.27■■□□□ 1
GCN1-209ENST00000551920 ARXQ96QS3 562 aa21.27■■□□□ 1
GCN1-209ENST00000551920 TBC1D2BQ9UPU7 963 aa21.27■■□□□ 1
GCN1-209ENST00000551920 MMP10P09238 476 aa21.26■□□□□ 0.99
GCN1-209ENST00000551920 HOXB7P09629 217 aa21.26■□□□□ 0.99
GCN1-209ENST00000551920 ERBB4Q15303 1308 aa21.26■□□□□ 0.99
GCN1-209ENST00000551920 ZPR1O75312 459 aa21.25■□□□□ 0.99
GCN1-209ENST00000551920 CAMTA2O94983 1202 aa21.25■□□□□ 0.99
GCN1-209ENST00000551920 ANXA1P04083 346 aa21.25■□□□□ 0.99
GCN1-209ENST00000551920 TSPYL6Q8N831 410 aa21.25■□□□□ 0.99
GCN1-209ENST00000551920 PPP1R1BQ9UD71 204 aaPredicted RBP21.25■□□□□ 0.99
GCN1-209ENST00000551920 A0A087WZG4 1122 aa21.24■□□□□ 0.99
GCN1-209ENST00000551920 ELL2O00472 640 aaPredicted RBP21.24■□□□□ 0.99
GCN1-209ENST00000551920 MYL6BP14649 208 aa21.24■□□□□ 0.99
GCN1-209ENST00000551920 DDR1Q08345 913 aa21.24■□□□□ 0.99
GCN1-209ENST00000551920 DZIP3Q86Y13 1208 aaKnown RBP21.24■□□□□ 0.99
GCN1-209ENST00000551920 NLGN1Q8N2Q7 840 aa21.24■□□□□ 0.99
GCN1-209ENST00000551920 HDGFL1Q5TGJ6 251 aa21.23■□□□□ 0.99
GCN1-209ENST00000551920 FHDC1Q9C0D6 1143 aaPredicted RBP21.23■□□□□ 0.99
GCN1-209ENST00000551920 CHPF2Q9P2E5 772 aa21.22■□□□□ 0.99
GCN1-209ENST00000551920 NFIXQ14938 502 aa21.21■□□□□ 0.99
GCN1-209ENST00000551920 TTLL7Q6ZT98 887 aa21.21■□□□□ 0.99
GCN1-209ENST00000551920 TM4SF1P30408 202 aa21.2■□□□□ 0.98
GCN1-209ENST00000551920 POLRMTO00411 1230 aaKnown RBP21.19■□□□□ 0.98
GCN1-209ENST00000551920 TBC1D9BQ66K14 1250 aa21.19■□□□□ 0.98
GCN1-209ENST00000551920 DDX21Q9NR30 783 aaKnown RBP eCLIP21.19■□□□□ 0.98
GCN1-209ENST00000551920 C10orf71Q711Q0 1435 aa21.19■□□□□ 0.98
GCN1-209ENST00000551920 NPM2Q86SE8 214 aaKnown RBP21.18■□□□□ 0.98
GCN1-209ENST00000551920 EXOSC9Q06265 439 aaKnown RBP21.17■□□□□ 0.98
GCN1-209ENST00000551920 HLFQ16534 295 aa21.17■□□□□ 0.98
GCN1-209ENST00000551920 TWISTNBQ3B726 338 aaPredicted RBP21.17■□□□□ 0.98
GCN1-209ENST00000551920 KLHL34Q8N239 644 aa21.17■□□□□ 0.98
GCN1-209ENST00000551920 SYT17Q9BSW7 474 aa21.17■□□□□ 0.98
GCN1-209ENST00000551920 MYH16Q9H6N6 1097 aa21.17■□□□□ 0.98
GCN1-209ENST00000551920 NRXN2Q9P2S2 1712 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms