RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 GIGYF1O75420 1035 aaPredicted RBP24.29■■□□□ 1.48
DDX54-209ENST00000551912 INTS5Q6P9B9 1019 aaKnown RBP24.29■■□□□ 1.48
DDX54-209ENST00000551912 RTCBQ9Y3I0 505 aaKnown RBP24.29■■□□□ 1.48
DDX54-209ENST00000551912 UBR3Q6ZT12 1888 aa24.28■■□□□ 1.48
DDX54-209ENST00000551912 RPS6KA4O75676 772 aa24.28■■□□□ 1.48
DDX54-209ENST00000551912 SSFA2P28290 1259 aa24.28■■□□□ 1.48
DDX54-209ENST00000551912 USP16Q9Y5T5 823 aa24.28■■□□□ 1.48
DDX54-209ENST00000551912 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.27■■□□□ 1.48
DDX54-209ENST00000551912 PHF14O94880 888 aa24.27■■□□□ 1.48
DDX54-209ENST00000551912 AMIGO3Q86WK7 504 aa24.27■■□□□ 1.48
DDX54-209ENST00000551912 PDGFDQ9GZP0 370 aaPredicted RBP24.27■■□□□ 1.48
DDX54-209ENST00000551912 ZBTB1Q9Y2K1 713 aa24.26■■□□□ 1.47
DDX54-209ENST00000551912 CASZ1Q86V15 1759 aa24.25■■□□□ 1.47
DDX54-209ENST00000551912 MSH5O43196 834 aa24.25■■□□□ 1.47
DDX54-209ENST00000551912 SMIM5Q71RC9 77 aa24.25■■□□□ 1.47
DDX54-209ENST00000551912 COL23A1Q86Y22 540 aaPredicted RBP24.25■■□□□ 1.47
DDX54-209ENST00000551912 ADRA2BP18089 450 aa24.24■■□□□ 1.47
DDX54-209ENST00000551912 TRAPPC3LQ5T215 181 aa24.24■■□□□ 1.47
DDX54-209ENST00000551912 ZNF521Q96K83 1311 aa24.24■■□□□ 1.47
DDX54-209ENST00000551912 A1BGP04217 495 aa24.23■■□□□ 1.47
DDX54-209ENST00000551912 CANXP27824 592 aaKnown RBP24.23■■□□□ 1.47
DDX54-209ENST00000551912 LAMB4A4D0S4 1761 aa24.22■■□□□ 1.47
DDX54-209ENST00000551912 SOS1Q07889 1333 aaPredicted RBP24.22■■□□□ 1.47
DDX54-209ENST00000551912 KRT24Q2M2I5 525 aa24.22■■□□□ 1.47
DDX54-209ENST00000551912 SLC16A10Q8TF71 515 aa24.22■■□□□ 1.47
DDX54-209ENST00000551912 TSR2Q969E8 191 aaKnown RBP24.22■■□□□ 1.47
DDX54-209ENST00000551912 ARHGEF1Q92888 912 aaKnown RBP24.21■■□□□ 1.47
DDX54-209ENST00000551912 ZBTB7AO95365 584 aa24.2■■□□□ 1.46
DDX54-209ENST00000551912 HOXB7P09629 217 aa24.2■■□□□ 1.46
DDX54-209ENST00000551912 RFC4P35249 363 aa24.19■■□□□ 1.46
DDX54-209ENST00000551912 IL6STP40189 918 aaPredicted RBP24.19■■□□□ 1.46
DDX54-209ENST00000551912 DUSP27Q5VZP5 1158 aa24.19■■□□□ 1.46
DDX54-209ENST00000551912 MTFR1LQ9H019 292 aa24.19■■□□□ 1.46
DDX54-209ENST00000551912 MYH16Q9H6N6 1097 aa24.19■■□□□ 1.46
DDX54-209ENST00000551912 COL15A1P39059 1388 aa24.18■■□□□ 1.46
DDX54-209ENST00000551912 FANCIQ9NVI1 1328 aa24.18■■□□□ 1.46
DDX54-209ENST00000551912 EIF2S2P20042 333 aaKnown RBP24.18■■□□□ 1.46
DDX54-209ENST00000551912 EIF5P55010 431 aaKnown RBP24.18■■□□□ 1.46
DDX54-209ENST00000551912 GOLGA2Q08379 1002 aa24.18■■□□□ 1.46
DDX54-209ENST00000551912 NPM2Q86SE8 214 aaKnown RBP24.18■■□□□ 1.46
DDX54-209ENST00000551912 SPINK5Q9NQ38 1064 aaPredicted RBP24.18■■□□□ 1.46
DDX54-209ENST00000551912 PIP4K2AP48426 406 aaPredicted RBP24.17■■□□□ 1.46
DDX54-209ENST00000551912 HNRNPUQ00839 825 aaKnown RBP eCLIP24.17■■□□□ 1.46
DDX54-209ENST00000551912 ZNF330Q9Y3S2 320 aaPredicted RBP24.17■■□□□ 1.46
DDX54-209ENST00000551912 ERBB4Q15303 1308 aa24.16■■□□□ 1.46
DDX54-209ENST00000551912 C8orf58Q8NAV2 365 aa24.16■■□□□ 1.46
DDX54-209ENST00000551912 SPON1Q9HCB6 807 aa24.16■■□□□ 1.46
DDX54-209ENST00000551912 ATF5Q9Y2D1 282 aaPredicted RBP24.16■■□□□ 1.46
DDX54-209ENST00000551912 A0A087WZG4 1122 aa24.15■■□□□ 1.46
DDX54-209ENST00000551912 NBPF26B4DH59 902 aa24.15■■□□□ 1.46
DDX54-209ENST00000551912 ELL2O00472 640 aaPredicted RBP24.15■■□□□ 1.46
DDX54-209ENST00000551912 NBPF10Q6P3W6 841 aaKnown RBP24.15■■□□□ 1.46
DDX54-209ENST00000551912 NBPF15Q8N660 670 aa24.15■■□□□ 1.46
DDX54-209ENST00000551912 SRCAPQ6ZRS2 3230 aa24.15■■□□□ 1.46
DDX54-209ENST00000551912 C4AP0C0L4 1744 aa24.14■■□□□ 1.45
DDX54-209ENST00000551912 HDGFL1Q5TGJ6 251 aa24.14■■□□□ 1.45
DDX54-209ENST00000551912 E9PSI1 815 aa24.13■■□□□ 1.45
DDX54-209ENST00000551912 ZPR1O75312 459 aa24.13■■□□□ 1.45
DDX54-209ENST00000551912 NECTIN2Q92692 538 aa24.13■■□□□ 1.45
DDX54-209ENST00000551912 USP42Q9H9J4 1324 aaKnown RBP24.12■■□□□ 1.45
DDX54-209ENST00000551912 TSPYL6Q8N831 410 aa24.12■■□□□ 1.45
DDX54-209ENST00000551912 SRP68Q9UHB9 627 aaKnown RBP24.12■■□□□ 1.45
DDX54-209ENST00000551912 NARFQ9UHQ1 456 aa24.12■■□□□ 1.45
DDX54-209ENST00000551912 MYL6BP14649 208 aa24.11■■□□□ 1.45
DDX54-209ENST00000551912 MSL1Q68DK7 614 aa24.11■■□□□ 1.45
DDX54-209ENST00000551912 ARXQ96QS3 562 aa24.11■■□□□ 1.45
DDX54-209ENST00000551912 CHMP4AQ9BY43 222 aa24.11■■□□□ 1.45
DDX54-209ENST00000551912 GYS1P13807 737 aa24.1■■□□□ 1.45
DDX54-209ENST00000551912 EXOSC9Q06265 439 aaKnown RBP24.1■■□□□ 1.45
DDX54-209ENST00000551912 SLFN5Q08AF3 891 aa24.1■■□□□ 1.45
DDX54-209ENST00000551912 TWISTNBQ3B726 338 aaPredicted RBP24.1■■□□□ 1.45
DDX54-209ENST00000551912 TBC1D2BQ9UPU7 963 aa24.1■■□□□ 1.45
DDX54-209ENST00000551912 PDIA6Q15084 440 aa24.09■■□□□ 1.45
DDX54-209ENST00000551912 USPL1Q5W0Q7 1092 aa24.09■■□□□ 1.45
DDX54-209ENST00000551912 DZIP3Q86Y13 1208 aaKnown RBP24.09■■□□□ 1.45
DDX54-209ENST00000551912 NLGN1Q8N2Q7 840 aa24.09■■□□□ 1.45
DDX54-209ENST00000551912 CDCA7LQ96GN5 454 aa24.09■■□□□ 1.45
DDX54-209ENST00000551912 DDX21Q9NR30 783 aaKnown RBP eCLIP24.09■■□□□ 1.45
DDX54-209ENST00000551912 POLD1P28340 1107 aa24.08■■□□□ 1.45
DDX54-209ENST00000551912 PTGER2P43116 358 aa24.08■■□□□ 1.45
DDX54-209ENST00000551912 CHPF2Q9P2E5 772 aa24.08■■□□□ 1.45
DDX54-209ENST00000551912 DBF4Q9UBU7 674 aaPredicted RBP24.08■■□□□ 1.45
DDX54-209ENST00000551912 LRP5O75197 1615 aa24.07■■□□□ 1.44
DDX54-209ENST00000551912 ANXA1P04083 346 aa24.07■■□□□ 1.44
DDX54-209ENST00000551912 PROSER3Q2NL68 480 aa24.07■■□□□ 1.44
DDX54-209ENST00000551912 SGIP1Q9BQI5 828 aa24.07■■□□□ 1.44
DDX54-209ENST00000551912 CCDC30Q5VVM6 783 aa24.06■■□□□ 1.44
DDX54-209ENST00000551912 COL24A1Q17RW2 1714 aa24.06■■□□□ 1.44
DDX54-209ENST00000551912 CAMTA2O94983 1202 aa24.05■■□□□ 1.44
DDX54-209ENST00000551912 FKBP8Q14318 412 aa24.05■■□□□ 1.44
DDX54-209ENST00000551912 LRP10Q7Z4F1 713 aa24.05■■□□□ 1.44
DDX54-209ENST00000551912 TRMT2AQ8IZ69 625 aaKnown RBP24.04■■□□□ 1.44
DDX54-209ENST00000551912 ZBED9Q6R2W3 1325 aa24.04■■□□□ 1.44
DDX54-209ENST00000551912 VAMP4O75379 141 aa24.03■■□□□ 1.44
DDX54-209ENST00000551912 KIF6Q6ZMV9 814 aa24.03■■□□□ 1.44
DDX54-209ENST00000551912 BCL2L12Q9HB09 334 aa24.03■■□□□ 1.44
DDX54-209ENST00000551912 HYPKQ9NX55 129 aa24.03■■□□□ 1.44
DDX54-209ENST00000551912 SCN7AQ01118 1682 aa24.02■■□□□ 1.44
DDX54-209ENST00000551912 MMP10P09238 476 aa24.02■■□□□ 1.44
DDX54-209ENST00000551912 TTLL7Q6ZT98 887 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms