RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 COL5A3P25940 1745 aaPredicted RBP19.77■□□□□ 0.76
SMARCD1-211ENST00000551497 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.77■□□□□ 0.76
SMARCD1-211ENST00000551497 MSH5O43196 834 aa19.77■□□□□ 0.76
SMARCD1-211ENST00000551497 STARD3NLO95772 234 aa19.77■□□□□ 0.76
SMARCD1-211ENST00000551497 A1BGP04217 495 aa19.77■□□□□ 0.76
SMARCD1-211ENST00000551497 GNAI1P63096 354 aa19.77■□□□□ 0.76
SMARCD1-211ENST00000551497 IFT57Q9NWB7 429 aa19.77■□□□□ 0.76
SMARCD1-211ENST00000551497 ZBTB7AO95365 584 aa19.76■□□□□ 0.75
SMARCD1-211ENST00000551497 CANXP27824 592 aaKnown RBP19.76■□□□□ 0.75
SMARCD1-211ENST00000551497 ZBTB1Q9Y2K1 713 aa19.76■□□□□ 0.75
SMARCD1-211ENST00000551497 RTCBQ9Y3I0 505 aaKnown RBP19.76■□□□□ 0.75
SMARCD1-211ENST00000551497 TUBGCP6Q96RT7 1819 aa19.76■□□□□ 0.75
SMARCD1-211ENST00000551497 PIP4K2AP48426 406 aaPredicted RBP19.75■□□□□ 0.75
SMARCD1-211ENST00000551497 WDR63Q8IWG1 891 aa19.75■□□□□ 0.75
SMARCD1-211ENST00000551497 UBR3Q6ZT12 1888 aa19.74■□□□□ 0.75
SMARCD1-211ENST00000551497 TRAPPC3LQ5T215 181 aa19.74■□□□□ 0.75
SMARCD1-211ENST00000551497 NGEFQ8N5V2 710 aa19.74■□□□□ 0.75
SMARCD1-211ENST00000551497 ARHGEF1Q92888 912 aaKnown RBP19.74■□□□□ 0.75
SMARCD1-211ENST00000551497 TSR2Q969E8 191 aaKnown RBP19.74■□□□□ 0.75
SMARCD1-211ENST00000551497 SPINK5Q9NQ38 1064 aaPredicted RBP19.74■□□□□ 0.75
SMARCD1-211ENST00000551497 ATF5Q9Y2D1 282 aaPredicted RBP19.74■□□□□ 0.75
SMARCD1-211ENST00000551497 CICQ96RK0 1608 aaPredicted RBP19.73■□□□□ 0.75
SMARCD1-211ENST00000551497 SSFA2P28290 1259 aa19.73■□□□□ 0.75
SMARCD1-211ENST00000551497 FLAD1Q8NFF5 587 aa19.73■□□□□ 0.75
SMARCD1-211ENST00000551497 IL16Q14005 1332 aa19.72■□□□□ 0.75
SMARCD1-211ENST00000551497 ZNF521Q96K83 1311 aa19.72■□□□□ 0.75
SMARCD1-211ENST00000551497 CASZ1Q86V15 1759 aa19.71■□□□□ 0.75
SMARCD1-211ENST00000551497 NBPF26B4DH59 902 aa19.71■□□□□ 0.75
SMARCD1-211ENST00000551497 ELL2O00472 640 aaPredicted RBP19.71■□□□□ 0.75
SMARCD1-211ENST00000551497 EIF2S2P20042 333 aaKnown RBP19.71■□□□□ 0.75
SMARCD1-211ENST00000551497 NBPF10Q6P3W6 841 aaKnown RBP19.71■□□□□ 0.75
SMARCD1-211ENST00000551497 NBPF15Q8N660 670 aa19.71■□□□□ 0.75
SMARCD1-211ENST00000551497 C8orf58Q8NAV2 365 aa19.71■□□□□ 0.75
SMARCD1-211ENST00000551497 SOS1Q07889 1333 aaPredicted RBP19.71■□□□□ 0.75
SMARCD1-211ENST00000551497 EIF5P55010 431 aaKnown RBP19.7■□□□□ 0.74
SMARCD1-211ENST00000551497 DUSP27Q5VZP5 1158 aa19.7■□□□□ 0.74
SMARCD1-211ENST00000551497 NECTIN2Q92692 538 aa19.7■□□□□ 0.74
SMARCD1-211ENST00000551497 QSER1Q2KHR3 1735 aa19.7■□□□□ 0.74
SMARCD1-211ENST00000551497 ADRA2BP18089 450 aa19.69■□□□□ 0.74
SMARCD1-211ENST00000551497 RFC4P35249 363 aa19.69■□□□□ 0.74
SMARCD1-211ENST00000551497 MSL1Q68DK7 614 aa19.69■□□□□ 0.74
SMARCD1-211ENST00000551497 SLC16A10Q8TF71 515 aa19.69■□□□□ 0.74
SMARCD1-211ENST00000551497 MTFR1LQ9H019 292 aa19.69■□□□□ 0.74
SMARCD1-211ENST00000551497 SRP68Q9UHB9 627 aaKnown RBP19.69■□□□□ 0.74
SMARCD1-211ENST00000551497 ZNF330Q9Y3S2 320 aaPredicted RBP19.69■□□□□ 0.74
SMARCD1-211ENST00000551497 TSPYL6Q8N831 410 aa19.68■□□□□ 0.74
SMARCD1-211ENST00000551497 IL6STP40189 918 aaPredicted RBP19.67■□□□□ 0.74
SMARCD1-211ENST00000551497 SPON1Q9HCB6 807 aa19.67■□□□□ 0.74
SMARCD1-211ENST00000551497 PTGER2P43116 358 aa19.66■□□□□ 0.74
SMARCD1-211ENST00000551497 CDCA7LQ96GN5 454 aa19.66■□□□□ 0.74
SMARCD1-211ENST00000551497 ARXQ96QS3 562 aa19.66■□□□□ 0.74
SMARCD1-211ENST00000551497 TBC1D2BQ9UPU7 963 aa19.66■□□□□ 0.74
SMARCD1-211ENST00000551497 FANCIQ9NVI1 1328 aa19.66■□□□□ 0.74
SMARCD1-211ENST00000551497 ANXA1P04083 346 aa19.65■□□□□ 0.74
SMARCD1-211ENST00000551497 MYL6BP14649 208 aa19.65■□□□□ 0.74
SMARCD1-211ENST00000551497 HNRNPUQ00839 825 aaKnown RBP eCLIP19.65■□□□□ 0.74
SMARCD1-211ENST00000551497 GOLGA2Q08379 1002 aa19.65■□□□□ 0.74
SMARCD1-211ENST00000551497 PDIA6Q15084 440 aa19.65■□□□□ 0.74
SMARCD1-211ENST00000551497 PROSER3Q2NL68 480 aa19.64■□□□□ 0.73
SMARCD1-211ENST00000551497 USPL1Q5W0Q7 1092 aa19.64■□□□□ 0.73
SMARCD1-211ENST00000551497 COL15A1P39059 1388 aa19.64■□□□□ 0.73
SMARCD1-211ENST00000551497 LRP5O75197 1615 aa19.63■□□□□ 0.73
SMARCD1-211ENST00000551497 USP42Q9H9J4 1324 aaKnown RBP19.63■□□□□ 0.73
SMARCD1-211ENST00000551497 ZPR1O75312 459 aa19.63■□□□□ 0.73
SMARCD1-211ENST00000551497 HOXB7P09629 217 aa19.63■□□□□ 0.73
SMARCD1-211ENST00000551497 GYS1P13807 737 aa19.63■□□□□ 0.73
SMARCD1-211ENST00000551497 EXOSC9Q06265 439 aaKnown RBP19.63■□□□□ 0.73
SMARCD1-211ENST00000551497 HDGFL1Q5TGJ6 251 aa19.63■□□□□ 0.73
SMARCD1-211ENST00000551497 SGIP1Q9BQI5 828 aa19.63■□□□□ 0.73
SMARCD1-211ENST00000551497 MYH16Q9H6N6 1097 aa19.63■□□□□ 0.73
SMARCD1-211ENST00000551497 NARFQ9UHQ1 456 aa19.63■□□□□ 0.73
SMARCD1-211ENST00000551497 A0A087WZG4 1122 aa19.62■□□□□ 0.73
SMARCD1-211ENST00000551497 SLFN5Q08AF3 891 aa19.62■□□□□ 0.73
SMARCD1-211ENST00000551497 FKBP8Q14318 412 aa19.62■□□□□ 0.73
SMARCD1-211ENST00000551497 BCL2L12Q9HB09 334 aa19.62■□□□□ 0.73
SMARCD1-211ENST00000551497 LAMB4A4D0S4 1761 aa19.62■□□□□ 0.73
SMARCD1-211ENST00000551497 LRP10Q7Z4F1 713 aa19.61■□□□□ 0.73
SMARCD1-211ENST00000551497 NPM2Q86SE8 214 aaKnown RBP19.61■□□□□ 0.73
SMARCD1-211ENST00000551497 DZIP3Q86Y13 1208 aaKnown RBP19.61■□□□□ 0.73
SMARCD1-211ENST00000551497 CHPF2Q9P2E5 772 aa19.61■□□□□ 0.73
SMARCD1-211ENST00000551497 C4AP0C0L4 1744 aa19.6■□□□□ 0.73
SMARCD1-211ENST00000551497 TCERG1O14776 1098 aaKnown RBP19.6■□□□□ 0.73
SMARCD1-211ENST00000551497 TWISTNBQ3B726 338 aaPredicted RBP19.6■□□□□ 0.73
SMARCD1-211ENST00000551497 TTLL7Q6ZT98 887 aa19.6■□□□□ 0.73
SMARCD1-211ENST00000551497 NLGN1Q8N2Q7 840 aa19.6■□□□□ 0.73
SMARCD1-211ENST00000551497 ERBB4Q15303 1308 aa19.59■□□□□ 0.73
SMARCD1-211ENST00000551497 E9PSI1 815 aa19.59■□□□□ 0.73
SMARCD1-211ENST00000551497 VAMP4O75379 141 aa19.59■□□□□ 0.73
SMARCD1-211ENST00000551497 CAMTA2O94983 1202 aa19.59■□□□□ 0.73
SMARCD1-211ENST00000551497 DDX21Q9NR30 783 aaKnown RBP eCLIP19.59■□□□□ 0.73
SMARCD1-211ENST00000551497 MMP10P09238 476 aa19.57■□□□□ 0.72
SMARCD1-211ENST00000551497 POLD1P28340 1107 aa19.57■□□□□ 0.72
SMARCD1-211ENST00000551497 COPS6Q7L5N1 327 aa19.57■□□□□ 0.72
SMARCD1-211ENST00000551497 TRMT2AQ8IZ69 625 aaKnown RBP19.57■□□□□ 0.72
SMARCD1-211ENST00000551497 DBF4Q9UBU7 674 aaPredicted RBP19.57■□□□□ 0.72
SMARCD1-211ENST00000551497 TM4SF1P30408 202 aa19.56■□□□□ 0.72
SMARCD1-211ENST00000551497 AIMP1Q12904 312 aaKnown RBP19.56■□□□□ 0.72
SMARCD1-211ENST00000551497 HLFQ16534 295 aa19.56■□□□□ 0.72
SMARCD1-211ENST00000551497 CCDC30Q5VVM6 783 aa19.56■□□□□ 0.72
SMARCD1-211ENST00000551497 XAGE3Q8WTP9 111 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms