RNA–Protein interactions for RNA: ENST00000551176.1

ERBB3-218, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-218ENST00000551176 MAPK8IP3Q9UPT6 1336 aa10.09□□□□□ -0.79
ERBB3-218ENST00000551176 UTRNP46939 3433 aa10.09□□□□□ -0.79
ERBB3-218ENST00000551176 MMP10P09238 476 aa10.09□□□□□ -0.79
ERBB3-218ENST00000551176 TMPOP42166 694 aaKnown RBP10.09□□□□□ -0.79
ERBB3-218ENST00000551176 FKBP8Q14318 412 aa10.09□□□□□ -0.79
ERBB3-218ENST00000551176 TAF7Q15545 349 aaPredicted RBP10.09□□□□□ -0.79
ERBB3-218ENST00000551176 FMNL2Q96PY5 1086 aa10.09□□□□□ -0.79
ERBB3-218ENST00000551176 PNNQ9H307 717 aaKnown RBP10.09□□□□□ -0.79
ERBB3-218ENST00000551176 RRP7AQ9Y3A4 280 aaKnown RBP10.09□□□□□ -0.79
ERBB3-218ENST00000551176 MYH14Q7Z406 1995 aaKnown RBP10.08□□□□□ -0.8
ERBB3-218ENST00000551176 A1BGP04217 495 aa10.08□□□□□ -0.8
ERBB3-218ENST00000551176 NEFMP07197 916 aa10.08□□□□□ -0.8
ERBB3-218ENST00000551176 CANXP27824 592 aaKnown RBP10.08□□□□□ -0.8
ERBB3-218ENST00000551176 RIPK4P57078 832 aa10.08□□□□□ -0.8
ERBB3-218ENST00000551176 WDR43Q15061 677 aaKnown RBP eCLIP10.08□□□□□ -0.8
ERBB3-218ENST00000551176 NLGN1Q8N2Q7 840 aa10.08□□□□□ -0.8
ERBB3-218ENST00000551176 BCL2L12Q9HB09 334 aa10.08□□□□□ -0.8
ERBB3-218ENST00000551176 USP16Q9Y5T5 823 aa10.08□□□□□ -0.8
ERBB3-218ENST00000551176 COL15A1P39059 1388 aa10.07□□□□□ -0.8
ERBB3-218ENST00000551176 STARD3NLO95772 234 aa10.07□□□□□ -0.8
ERBB3-218ENST00000551176 PIP4K2AP48426 406 aaPredicted RBP10.07□□□□□ -0.8
ERBB3-218ENST00000551176 EIF5P55010 431 aaKnown RBP10.07□□□□□ -0.8
ERBB3-218ENST00000551176 DDR1Q08345 913 aa10.07□□□□□ -0.8
ERBB3-218ENST00000551176 USPL1Q5W0Q7 1092 aa10.07□□□□□ -0.8
ERBB3-218ENST00000551176 RUNDC1Q96C34 613 aa10.07□□□□□ -0.8
ERBB3-218ENST00000551176 TRIM35Q9UPQ4 493 aa10.07□□□□□ -0.8
ERBB3-218ENST00000551176 CD2APQ9Y5K6 639 aa10.07□□□□□ -0.8
ERBB3-218ENST00000551176 VIRMAQ69YN4 1812 aaKnown RBP10.07□□□□□ -0.8
ERBB3-218ENST00000551176 C4AP0C0L4 1744 aa10.07□□□□□ -0.8
ERBB3-218ENST00000551176 SNRPA1P09661 255 aaKnown RBP10.06□□□□□ -0.8
ERBB3-218ENST00000551176 TEX13AQ9BXU3 409 aaPredicted RBP10.06□□□□□ -0.8
ERBB3-218ENST00000551176 NBPF26B4DH59 902 aa10.05□□□□□ -0.8
ERBB3-218ENST00000551176 YBX3P16989 372 aaKnown RBP eCLIP10.05□□□□□ -0.86e-9■■□□□ 14
ERBB3-218ENST00000551176 TM4SF1P30408 202 aa10.05□□□□□ -0.8
ERBB3-218ENST00000551176 EIF4A1P60842 406 aaKnown RBP10.05□□□□□ -0.8
ERBB3-218ENST00000551176 NEUROD2Q15784 382 aa10.05□□□□□ -0.8
ERBB3-218ENST00000551176 NBPF10Q6P3W6 841 aaKnown RBP10.05□□□□□ -0.8
ERBB3-218ENST00000551176 NBPF15Q8N660 670 aa10.05□□□□□ -0.8
ERBB3-218ENST00000551176 NARFQ9UHQ1 456 aa10.05□□□□□ -0.8
ERBB3-218ENST00000551176 POLRMTO00411 1230 aaKnown RBP10.04□□□□□ -0.8
ERBB3-218ENST00000551176 ZPR1O75312 459 aa10.04□□□□□ -0.8
ERBB3-218ENST00000551176 GIGYF1O75420 1035 aaPredicted RBP10.04□□□□□ -0.8
ERBB3-218ENST00000551176 IL6STP40189 918 aaPredicted RBP10.04□□□□□ -0.8
ERBB3-218ENST00000551176 NFIXQ14938 502 aa10.04□□□□□ -0.8
ERBB3-218ENST00000551176 PNISRQ8TF01 805 aaKnown RBP10.04□□□□□ -0.8
ERBB3-218ENST00000551176 TBC1D2BQ9UPU7 963 aa10.04□□□□□ -0.8
ERBB3-218ENST00000551176 C10orf71Q711Q0 1435 aa10.04□□□□□ -0.8
ERBB3-218ENST00000551176 APAF1O14727 1248 aa10.03□□□□□ -0.8
ERBB3-218ENST00000551176 CAMTA2O94983 1202 aa10.03□□□□□ -0.8
ERBB3-218ENST00000551176 GPR162Q16538 588 aa10.03□□□□□ -0.8
ERBB3-218ENST00000551176 PELP1Q8IZL8 1130 aaKnown RBP10.03□□□□□ -0.8
ERBB3-218ENST00000551176 WWC3Q9ULE0 1092 aa10.03□□□□□ -0.8
ERBB3-218ENST00000551176 ZNF330Q9Y3S2 320 aaPredicted RBP10.03□□□□□ -0.8
ERBB3-218ENST00000551176 PXDNLA1KZ92 1463 aa10.03□□□□□ -0.8
ERBB3-218ENST00000551176 DLG5Q8TDM6 1919 aa10.02□□□□□ -0.81
ERBB3-218ENST00000551176 SENP3-EIF4A1A0A087X0R7 540 aa10.02□□□□□ -0.81
ERBB3-218ENST00000551176 A0A0G2JLW4 131 aa10.02□□□□□ -0.81
ERBB3-218ENST00000551176 ANP32CO43423 234 aa10.02□□□□□ -0.81
ERBB3-218ENST00000551176 LMOD3Q0VAK6 560 aa10.02□□□□□ -0.81
ERBB3-218ENST00000551176 TBC1D9BQ66K14 1250 aa10.02□□□□□ -0.81
ERBB3-218ENST00000551176 TSPYL4Q9UJ04 414 aa10.02□□□□□ -0.81
ERBB3-218ENST00000551176 PARP3Q9Y6F1 533 aa10.02□□□□□ -0.81
ERBB3-218ENST00000551176 KDM3BQ7LBC6 1761 aa10.01□□□□□ -0.81
ERBB3-218ENST00000551176 A0A087WZG4 1122 aa10.01□□□□□ -0.81
ERBB3-218ENST00000551176 DCAF8L1A6NGE4 600 aa10.01□□□□□ -0.81
ERBB3-218ENST00000551176 CHL1O00533 1208 aa10.01□□□□□ -0.81
ERBB3-218ENST00000551176 KCNA3P22001 575 aa10.01□□□□□ -0.81
ERBB3-218ENST00000551176 KRT24Q2M2I5 525 aa10.01□□□□□ -0.81
ERBB3-218ENST00000551176 KIAA1551Q9HCM1 1747 aa10□□□□□ -0.81
ERBB3-218ENST00000551176 DPEP1P16444 411 aa10□□□□□ -0.81
ERBB3-218ENST00000551176 YY1P25490 414 aa10□□□□□ -0.81
ERBB3-218ENST00000551176 BICDL1Q6ZP65 573 aa10□□□□□ -0.81
ERBB3-218ENST00000551176 DZIP3Q86Y13 1208 aaKnown RBP10□□□□□ -0.81
ERBB3-218ENST00000551176 MRS2Q9HD23 443 aa10□□□□□ -0.81
ERBB3-218ENST00000551176 BABAM1Q9NWV8 329 aa10□□□□□ -0.81
ERBB3-218ENST00000551176 CARMIL3Q8ND23 1372 aa10□□□□□ -0.81
ERBB3-218ENST00000551176 SERPINB2P05120 415 aa9.99□□□□□ -0.81
ERBB3-218ENST00000551176 TGFB2P61812 414 aa9.99□□□□□ -0.81
ERBB3-218ENST00000551176 PDIA6Q15084 440 aa9.99□□□□□ -0.81
ERBB3-218ENST00000551176 LRP10Q7Z4F1 713 aa9.99□□□□□ -0.81
ERBB3-218ENST00000551176 LAS1LQ9Y4W2 734 aaKnown RBP9.99□□□□□ -0.81
ERBB3-218ENST00000551176 SCN7AQ01118 1682 aa9.99□□□□□ -0.81
ERBB3-218ENST00000551176 ZNF853P0CG23 659 aa9.98□□□□□ -0.81
ERBB3-218ENST00000551176 MYL6BP14649 208 aa9.98□□□□□ -0.81
ERBB3-218ENST00000551176 CHRNA5P30532 468 aa9.98□□□□□ -0.81
ERBB3-218ENST00000551176 HLFQ16534 295 aa9.98□□□□□ -0.81
ERBB3-218ENST00000551176 PROSER3Q2NL68 480 aa9.98□□□□□ -0.81
ERBB3-218ENST00000551176 TTLL7Q6ZT98 887 aa9.98□□□□□ -0.81
ERBB3-218ENST00000551176 CCDC24Q8N4L8 307 aa9.98□□□□□ -0.81
ERBB3-218ENST00000551176 NGEFQ8N5V2 710 aa9.98□□□□□ -0.81
ERBB3-218ENST00000551176 MBIPQ9NS73 344 aa9.98□□□□□ -0.81
ERBB3-218ENST00000551176 ANXA1P04083 346 aa9.97□□□□□ -0.81
ERBB3-218ENST00000551176 NECTIN2Q92692 538 aa9.97□□□□□ -0.81
ERBB3-218ENST00000551176 CFAP44Q96MT7 982 aa9.97□□□□□ -0.81
ERBB3-218ENST00000551176 KIF13BQ9NQT8 1826 aa9.97□□□□□ -0.81
ERBB3-218ENST00000551176 NRXN2Q9P2S2 1712 aa9.96□□□□□ -0.81
ERBB3-218ENST00000551176 LAMB4A4D0S4 1761 aa9.96□□□□□ -0.81
ERBB3-218ENST00000551176 GRIN3BO60391 1043 aa9.96□□□□□ -0.82
ERBB3-218ENST00000551176 EIF2S2P20042 333 aaKnown RBP9.96□□□□□ -0.82
ERBB3-218ENST00000551176 PRR5LQ6MZQ0 368 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms