RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 ZPR1O75312 459 aa13.07□□□□□ -0.32
PFDN5-213ENST00000550964 CYP19A1P11511 503 aaPredicted RBP13.07□□□□□ -0.32
PFDN5-213ENST00000550964 DCTN1Q14203 1278 aa13.07□□□□□ -0.32
PFDN5-213ENST00000550964 CFAP44Q96MT7 982 aa13.07□□□□□ -0.32
PFDN5-213ENST00000550964 IL6STP40189 918 aaPredicted RBP13.06□□□□□ -0.32
PFDN5-213ENST00000550964 COL23A1Q86Y22 540 aaPredicted RBP13.06□□□□□ -0.32
PFDN5-213ENST00000550964 DNAJC10Q8IXB1 793 aa13.06□□□□□ -0.32
PFDN5-213ENST00000550964 SLC4A9Q96Q91 983 aa13.06□□□□□ -0.32
PFDN5-213ENST00000550964 SOS1Q07889 1333 aaPredicted RBP13.06□□□□□ -0.32
PFDN5-213ENST00000550964 ERBB4Q15303 1308 aa13.06□□□□□ -0.32
PFDN5-213ENST00000550964 RGL2O15211 777 aa13.05□□□□□ -0.32
PFDN5-213ENST00000550964 ZBTB7AO95365 584 aa13.05□□□□□ -0.32
PFDN5-213ENST00000550964 HOXB7P09629 217 aa13.05□□□□□ -0.32
PFDN5-213ENST00000550964 FAM9BQ8IZU0 186 aa13.05□□□□□ -0.32
PFDN5-213ENST00000550964 IFT57Q9NWB7 429 aa13.05□□□□□ -0.32
PFDN5-213ENST00000550964 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
PFDN5-213ENST00000550964 CHL1O00533 1208 aa13.04□□□□□ -0.32
PFDN5-213ENST00000550964 PHF14O94880 888 aa13.04□□□□□ -0.32
PFDN5-213ENST00000550964 RRP7AQ9Y3A4 280 aaKnown RBP13.04□□□□□ -0.32
PFDN5-213ENST00000550964 IL16Q14005 1332 aa13.04□□□□□ -0.32
PFDN5-213ENST00000550964 CACNA1FO60840 1977 aa13.03□□□□□ -0.32
PFDN5-213ENST00000550964 EIF4A1P60842 406 aaKnown RBP13.03□□□□□ -0.32
PFDN5-213ENST00000550964 INTS5Q6P9B9 1019 aaKnown RBP13.03□□□□□ -0.32
PFDN5-213ENST00000550964 WDR63Q8IWG1 891 aa13.03□□□□□ -0.32
PFDN5-213ENST00000550964 ARHGEF1Q92888 912 aaKnown RBP13.03□□□□□ -0.32
PFDN5-213ENST00000550964 ARXQ96QS3 562 aa13.03□□□□□ -0.32
PFDN5-213ENST00000550964 ATF5Q9Y2D1 282 aaPredicted RBP13.03□□□□□ -0.32
PFDN5-213ENST00000550964 C4AP0C0L4 1744 aa13.02□□□□□ -0.32
PFDN5-213ENST00000550964 GIGYF1O75420 1035 aaPredicted RBP13.02□□□□□ -0.33
PFDN5-213ENST00000550964 CCDC184Q52MB2 194 aa13.02□□□□□ -0.33
PFDN5-213ENST00000550964 NARFQ9UHQ1 456 aa13.02□□□□□ -0.33
PFDN5-213ENST00000550964 ZNF652Q9Y2D9 606 aa13.02□□□□□ -0.33
PFDN5-213ENST00000550964 LAS1LQ9Y4W2 734 aaKnown RBP13.02□□□□□ -0.33
PFDN5-213ENST00000550964 COL15A1P39059 1388 aa13.02□□□□□ -0.33
PFDN5-213ENST00000550964 CANXP27824 592 aaKnown RBP13.01□□□□□ -0.33
PFDN5-213ENST00000550964 EIF5P55010 431 aaKnown RBP13.01□□□□□ -0.33
PFDN5-213ENST00000550964 THUMPD2Q9BTF0 503 aaKnown RBP13.01□□□□□ -0.33
PFDN5-213ENST00000550964 USP42Q9H9J4 1324 aaKnown RBP13□□□□□ -0.33
PFDN5-213ENST00000550964 PTGER2P43116 358 aa13□□□□□ -0.33
PFDN5-213ENST00000550964 CLEC4GQ6UXB4 293 aa13□□□□□ -0.33
PFDN5-213ENST00000550964 WWC1Q8IX03 1113 aa13□□□□□ -0.33
PFDN5-213ENST00000550964 MIS18AQ9NYP9 233 aa13□□□□□ -0.33
PFDN5-213ENST00000550964 ZBTB1Q9Y2K1 713 aa13□□□□□ -0.33
PFDN5-213ENST00000550964 PARP3Q9Y6F1 533 aa13□□□□□ -0.33
PFDN5-213ENST00000550964 KCNQ3O43525 872 aa12.99□□□□□ -0.33
PFDN5-213ENST00000550964 SGIP1Q9BQI5 828 aa12.99□□□□□ -0.33
PFDN5-213ENST00000550964 MYH16Q9H6N6 1097 aa12.99□□□□□ -0.33
PFDN5-213ENST00000550964 CD2APQ9Y5K6 639 aa12.99□□□□□ -0.33
PFDN5-213ENST00000550964 USP16Q9Y5T5 823 aa12.99□□□□□ -0.33
PFDN5-213ENST00000550964 ZNF853P0CG23 659 aa12.98□□□□□ -0.33
PFDN5-213ENST00000550964 PDGFDQ9GZP0 370 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-213ENST00000550964 A1BGP04217 495 aa12.97□□□□□ -0.33
PFDN5-213ENST00000550964 GYS1P13807 737 aa12.97□□□□□ -0.33
PFDN5-213ENST00000550964 KIF6Q6ZMV9 814 aa12.97□□□□□ -0.33
PFDN5-213ENST00000550964 DBF4Q9UBU7 674 aaPredicted RBP12.97□□□□□ -0.33
PFDN5-213ENST00000550964 PDZRN3Q9UPQ7 1066 aa12.97□□□□□ -0.33
PFDN5-213ENST00000550964 ZNF330Q9Y3S2 320 aaPredicted RBP12.97□□□□□ -0.33
PFDN5-213ENST00000550964 ERVV-1B6SEH8 477 aa12.96□□□□□ -0.33
PFDN5-213ENST00000550964 GOLGA2Q08379 1002 aa12.96□□□□□ -0.33
PFDN5-213ENST00000550964 DZIP3Q86Y13 1208 aaKnown RBP12.96□□□□□ -0.33
PFDN5-213ENST00000550964 MBIPQ9NS73 344 aa12.96□□□□□ -0.33
PFDN5-213ENST00000550964 SCN7AQ01118 1682 aa12.96□□□□□ -0.34
PFDN5-213ENST00000550964 BCORQ6W2J9 1755 aa12.95□□□□□ -0.34
PFDN5-213ENST00000550964 MMP10P09238 476 aa12.95□□□□□ -0.34
PFDN5-213ENST00000550964 USPL1Q5W0Q7 1092 aa12.95□□□□□ -0.34
PFDN5-213ENST00000550964 DDX21Q9NR30 783 aaKnown RBP eCLIP12.95□□□□□ -0.34
PFDN5-213ENST00000550964 HYPKQ9NX55 129 aa12.95□□□□□ -0.34
PFDN5-213ENST00000550964 NUP98P52948 1817 aa12.95□□□□□ -0.34
PFDN5-213ENST00000550964 EIF2S2P20042 333 aaKnown RBP12.94□□□□□ -0.34
PFDN5-213ENST00000550964 HSP90AB3PQ58FF7 597 aa12.94□□□□□ -0.34
PFDN5-213ENST00000550964 HDGFL1Q5TGJ6 251 aa12.94□□□□□ -0.34
PFDN5-213ENST00000550964 CCDC30Q5VVM6 783 aa12.94□□□□□ -0.34
PFDN5-213ENST00000550964 MSL1Q68DK7 614 aa12.94□□□□□ -0.34
PFDN5-213ENST00000550964 SETDB2Q96T68 719 aa12.94□□□□□ -0.34
PFDN5-213ENST00000550964 SYT17Q9BSW7 474 aa12.94□□□□□ -0.34
PFDN5-213ENST00000550964 FHDC1Q9C0D6 1143 aaPredicted RBP12.94□□□□□ -0.34
PFDN5-213ENST00000550964 KIF13BQ9NQT8 1826 aa12.94□□□□□ -0.34
PFDN5-213ENST00000550964 NPHP1O15259 732 aa12.93□□□□□ -0.34
PFDN5-213ENST00000550964 TM4SF1P30408 202 aa12.93□□□□□ -0.34
PFDN5-213ENST00000550964 TGFB2P61812 414 aa12.93□□□□□ -0.34
PFDN5-213ENST00000550964 DUSP27Q5VZP5 1158 aa12.93□□□□□ -0.34
PFDN5-213ENST00000550964 AMIGO3Q86WK7 504 aa12.93□□□□□ -0.34
PFDN5-213ENST00000550964 STK31Q9BXU1 1019 aa12.93□□□□□ -0.34
PFDN5-213ENST00000550964 TBC1D2BQ9UPU7 963 aa12.93□□□□□ -0.34
PFDN5-213ENST00000550964 CARMIL3Q8ND23 1372 aa12.93□□□□□ -0.34
PFDN5-213ENST00000550964 AFDNP55196 1824 aaKnown RBP12.91□□□□□ -0.34
PFDN5-213ENST00000550964 PRAMEF22A3QJZ6 481 aa12.91□□□□□ -0.34
PFDN5-213ENST00000550964 NBPF26B4DH59 902 aa12.91□□□□□ -0.34
PFDN5-213ENST00000550964 E9PSI1 815 aa12.91□□□□□ -0.34
PFDN5-213ENST00000550964 CAMTA2O94983 1202 aa12.91□□□□□ -0.34
PFDN5-213ENST00000550964 DDX58O95786 925 aaKnown RBP12.91□□□□□ -0.34
PFDN5-213ENST00000550964 MYL6BP14649 208 aa12.91□□□□□ -0.34
PFDN5-213ENST00000550964 FKBP8Q14318 412 aa12.91□□□□□ -0.34
PFDN5-213ENST00000550964 NBPF10Q6P3W6 841 aaKnown RBP12.91□□□□□ -0.34
PFDN5-213ENST00000550964 TPTE2Q6XPS3 522 aa12.91□□□□□ -0.34
PFDN5-213ENST00000550964 MIER1Q8N108 512 aa12.91□□□□□ -0.34
PFDN5-213ENST00000550964 KLHL34Q8N239 644 aa12.91□□□□□ -0.34
PFDN5-213ENST00000550964 NBPF15Q8N660 670 aa12.91□□□□□ -0.34
PFDN5-213ENST00000550964 ZNF428Q96B54 188 aa12.91□□□□□ -0.34
PFDN5-213ENST00000550964 NYXQ9GZU5 481 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms