RNA–Protein interactions for RNA: ENST00000549366.5

PFKM-216, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-216ENST00000549366 ZNF496Q96IT1 587 aaPredicted RBP10.14□□□□□ -0.79
PFKM-216ENST00000549366 THUMPD2Q9BTF0 503 aaKnown RBP10.14□□□□□ -0.79
PFKM-216ENST00000549366 MTFR1LQ9H019 292 aa10.14□□□□□ -0.79
PFKM-216ENST00000549366 SPON1Q9HCB6 807 aa10.14□□□□□ -0.79
PFKM-216ENST00000549366 RNF216Q9NWF9 866 aaPredicted RBP10.14□□□□□ -0.79
PFKM-216ENST00000549366 COL15A1P39059 1388 aa10.14□□□□□ -0.79
PFKM-216ENST00000549366 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.13□□□□□ -0.79
PFKM-216ENST00000549366 SNRPA1P09661 255 aaKnown RBP10.13□□□□□ -0.79
PFKM-216ENST00000549366 CCDC27Q2M243 656 aa10.13□□□□□ -0.79
PFKM-216ENST00000549366 NPM2Q86SE8 214 aaKnown RBP10.13□□□□□ -0.79
PFKM-216ENST00000549366 CCDC87Q9NVE4 849 aa10.13□□□□□ -0.79
PFKM-216ENST00000549366 TRIM35Q9UPQ4 493 aa10.13□□□□□ -0.79
PFKM-216ENST00000549366 RPS6KA4O75676 772 aa10.12□□□□□ -0.79
PFKM-216ENST00000549366 CYP19A1P11511 503 aaPredicted RBP10.12□□□□□ -0.79
PFKM-216ENST00000549366 SOS1Q07889 1333 aaPredicted RBP10.11□□□□□ -0.79
PFKM-216ENST00000549366 ZBTB7AO95365 584 aa10.11□□□□□ -0.79
PFKM-216ENST00000549366 POLD1P28340 1107 aa10.11□□□□□ -0.79
PFKM-216ENST00000549366 GNAI1P63096 354 aa10.11□□□□□ -0.79
PFKM-216ENST00000549366 TRAPPC3LQ5T215 181 aa10.11□□□□□ -0.79
PFKM-216ENST00000549366 CFAP44Q96MT7 982 aa10.11□□□□□ -0.79
PFKM-216ENST00000549366 IFT57Q9NWB7 429 aa10.11□□□□□ -0.79
PFKM-216ENST00000549366 PPP1R1BQ9UD71 204 aaPredicted RBP10.11□□□□□ -0.79
PFKM-216ENST00000549366 ZBTB1Q9Y2K1 713 aa10.11□□□□□ -0.79
PFKM-216ENST00000549366 LAS1LQ9Y4W2 734 aaKnown RBP10.11□□□□□ -0.79
PFKM-216ENST00000549366 KCNQ3O43525 872 aa10.1□□□□□ -0.79
PFKM-216ENST00000549366 RFC4P35249 363 aa10.1□□□□□ -0.79
PFKM-216ENST00000549366 EIF4A1P60842 406 aaKnown RBP10.1□□□□□ -0.79
PFKM-216ENST00000549366 COL23A1Q86Y22 540 aaPredicted RBP10.1□□□□□ -0.79
PFKM-216ENST00000549366 ERBB4Q15303 1308 aa10.09□□□□□ -0.79
PFKM-216ENST00000549366 A0A087WZG4 1122 aa10.09□□□□□ -0.79
PFKM-216ENST00000549366 HOXB7P09629 217 aa10.09□□□□□ -0.79
PFKM-216ENST00000549366 IL6STP40189 918 aaPredicted RBP10.09□□□□□ -0.79
PFKM-216ENST00000549366 INTS5Q6P9B9 1019 aaKnown RBP10.09□□□□□ -0.79
PFKM-216ENST00000549366 PDGFDQ9GZP0 370 aaPredicted RBP10.09□□□□□ -0.79
PFKM-216ENST00000549366 MIS18AQ9NYP9 233 aa10.09□□□□□ -0.79
PFKM-216ENST00000549366 IL16Q14005 1332 aa10.08□□□□□ -0.8
PFKM-216ENST00000549366 USP42Q9H9J4 1324 aaKnown RBP10.08□□□□□ -0.8
PFKM-216ENST00000549366 CHL1O00533 1208 aa10.08□□□□□ -0.8
PFKM-216ENST00000549366 ZPR1O75312 459 aa10.08□□□□□ -0.8
PFKM-216ENST00000549366 GIGYF1O75420 1035 aaPredicted RBP10.08□□□□□ -0.8
PFKM-216ENST00000549366 CANXP27824 592 aaKnown RBP10.08□□□□□ -0.8
PFKM-216ENST00000549366 WWC1Q8IX03 1113 aa10.08□□□□□ -0.8
PFKM-216ENST00000549366 ARHGEF1Q92888 912 aaKnown RBP10.08□□□□□ -0.8
PFKM-216ENST00000549366 ATF5Q9Y2D1 282 aaPredicted RBP10.08□□□□□ -0.8
PFKM-216ENST00000549366 ZNF330Q9Y3S2 320 aaPredicted RBP10.08□□□□□ -0.8
PFKM-216ENST00000549366 KIF13BQ9NQT8 1826 aa10.07□□□□□ -0.8
PFKM-216ENST00000549366 ANKRD36CQ5JPF3 1778 aa10.07□□□□□ -0.8
PFKM-216ENST00000549366 AMIGO3Q86WK7 504 aa10.07□□□□□ -0.8
PFKM-216ENST00000549366 WDR63Q8IWG1 891 aa10.07□□□□□ -0.8
PFKM-216ENST00000549366 MIER1Q8N108 512 aa10.07□□□□□ -0.8
PFKM-216ENST00000549366 CHMP4AQ9BY43 222 aa10.07□□□□□ -0.8
PFKM-216ENST00000549366 MBIPQ9NS73 344 aa10.07□□□□□ -0.8
PFKM-216ENST00000549366 USP16Q9Y5T5 823 aa10.07□□□□□ -0.8
PFKM-216ENST00000549366 PRAMEF22A3QJZ6 481 aa10.06□□□□□ -0.8
PFKM-216ENST00000549366 ZNF853P0CG23 659 aa10.06□□□□□ -0.8
PFKM-216ENST00000549366 PTGER2P43116 358 aa10.06□□□□□ -0.8
PFKM-216ENST00000549366 EIF5P55010 431 aaKnown RBP10.06□□□□□ -0.8
PFKM-216ENST00000549366 MSL1Q68DK7 614 aa10.06□□□□□ -0.8
PFKM-216ENST00000549366 NLGN1Q8N2Q7 840 aa10.06□□□□□ -0.8
PFKM-216ENST00000549366 ARXQ96QS3 562 aa10.06□□□□□ -0.8
PFKM-216ENST00000549366 NARFQ9UHQ1 456 aa10.06□□□□□ -0.8
PFKM-216ENST00000549366 NRXN2Q9P2S2 1712 aa10.06□□□□□ -0.8
PFKM-216ENST00000549366 NUP98P52948 1817 aa10.05□□□□□ -0.8
PFKM-216ENST00000549366 AFDNP55196 1824 aaKnown RBP10.05□□□□□ -0.8
PFKM-216ENST00000549366 CACNA1FO60840 1977 aa10.05□□□□□ -0.8
PFKM-216ENST00000549366 A1BGP04217 495 aa10.05□□□□□ -0.8
PFKM-216ENST00000549366 GYS1P13807 737 aa10.05□□□□□ -0.8
PFKM-216ENST00000549366 HDGFL1Q5TGJ6 251 aa10.05□□□□□ -0.8
PFKM-216ENST00000549366 SGIP1Q9BQI5 828 aa10.05□□□□□ -0.8
PFKM-216ENST00000549366 MYH16Q9H6N6 1097 aa10.05□□□□□ -0.8
PFKM-216ENST00000549366 ZNF652Q9Y2D9 606 aa10.05□□□□□ -0.8
PFKM-216ENST00000549366 SALL2Q9Y467 1007 aaPredicted RBP10.05□□□□□ -0.8
PFKM-216ENST00000549366 ARFGEF2Q9Y6D5 1785 aa10.04□□□□□ -0.8
PFKM-216ENST00000549366 USPL1Q5W0Q7 1092 aa10.04□□□□□ -0.8
PFKM-216ENST00000549366 SMIM5Q71RC9 77 aa10.04□□□□□ -0.8
PFKM-216ENST00000549366 DZIP3Q86Y13 1208 aaKnown RBP10.04□□□□□ -0.8
PFKM-216ENST00000549366 FANCIQ9NVI1 1328 aa10.04□□□□□ -0.8
PFKM-216ENST00000549366 SENP3-EIF4A1A0A087X0R7 540 aa10.03□□□□□ -0.8
PFKM-216ENST00000549366 RGL2O15211 777 aa10.03□□□□□ -0.8
PFKM-216ENST00000549366 EIF2S2P20042 333 aaKnown RBP10.03□□□□□ -0.8
PFKM-216ENST00000549366 DUSP27Q5VZP5 1158 aa10.03□□□□□ -0.8
PFKM-216ENST00000549366 KIF6Q6ZMV9 814 aa10.03□□□□□ -0.8
PFKM-216ENST00000549366 C10orf71Q711Q0 1435 aa10.03□□□□□ -0.8
PFKM-216ENST00000549366 TSR2Q969E8 191 aaKnown RBP10.03□□□□□ -0.8
PFKM-216ENST00000549366 SRP68Q9UHB9 627 aaKnown RBP10.03□□□□□ -0.8
PFKM-216ENST00000549366 PARP3Q9Y6F1 533 aa10.03□□□□□ -0.8
PFKM-216ENST00000549366 ZNF521Q96K83 1311 aa10.03□□□□□ -0.8
PFKM-216ENST00000549366 CARMIL3Q8ND23 1372 aa10.02□□□□□ -0.8
PFKM-216ENST00000549366 DLEC1Q9Y238 1755 aa10.02□□□□□ -0.81
PFKM-216ENST00000549366 MMP10P09238 476 aa10.02□□□□□ -0.81
PFKM-216ENST00000549366 MYL6BP14649 208 aa10.02□□□□□ -0.81
PFKM-216ENST00000549366 PIP4K2AP48426 406 aaPredicted RBP10.02□□□□□ -0.81
PFKM-216ENST00000549366 GOLGA2Q08379 1002 aa10.02□□□□□ -0.81
PFKM-216ENST00000549366 KRT24Q2M2I5 525 aa10.02□□□□□ -0.81
PFKM-216ENST00000549366 KLHL34Q8N239 644 aa10.02□□□□□ -0.81
PFKM-216ENST00000549366 DDX21Q9NR30 783 aaKnown RBP eCLIP10.02□□□□□ -0.81
PFKM-216ENST00000549366 DBF4Q9UBU7 674 aaPredicted RBP10.02□□□□□ -0.81
PFKM-216ENST00000549366 KIAA1551Q9HCM1 1747 aa10.02□□□□□ -0.81
PFKM-216ENST00000549366 ATP10DQ9P241 1426 aa10.01□□□□□ -0.81
PFKM-216ENST00000549366 NBPF26B4DH59 902 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms