RNA–Protein interactions for RNA: ENST00000549044.5

BRF1-214, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-214ENST00000549044 SRP68Q9UHB9 627 aaKnown RBP24.56■■□□□ 1.52
BRF1-214ENST00000549044 SOS1Q07889 1333 aaPredicted RBP24.56■■□□□ 1.52
BRF1-214ENST00000549044 TRIM35Q9UPQ4 493 aa24.55■■□□□ 1.52
BRF1-214ENST00000549044 SYT17Q9BSW7 474 aa24.54■■□□□ 1.52
BRF1-214ENST00000549044 USP16Q9Y5T5 823 aa24.54■■□□□ 1.52
BRF1-214ENST00000549044 C4AP0C0L4 1744 aa24.53■■□□□ 1.52
BRF1-214ENST00000549044 GYS1P13807 737 aa24.53■■□□□ 1.52
BRF1-214ENST00000549044 CANXP27824 592 aaKnown RBP24.53■■□□□ 1.52
BRF1-214ENST00000549044 RFC4P35249 363 aa24.53■■□□□ 1.52
BRF1-214ENST00000549044 PNISRQ8TF01 805 aaKnown RBP24.53■■□□□ 1.52
BRF1-214ENST00000549044 MRS2Q9HD23 443 aa24.53■■□□□ 1.52
BRF1-214ENST00000549044 STARD3NLO95772 234 aa24.52■■□□□ 1.52
BRF1-214ENST00000549044 A1BGP04217 495 aa24.52■■□□□ 1.52
BRF1-214ENST00000549044 APAF1O14727 1248 aa24.51■■□□□ 1.51
BRF1-214ENST00000549044 KLHL34Q8N239 644 aa24.51■■□□□ 1.51
BRF1-214ENST00000549044 KDM3BQ7LBC6 1761 aa24.5■■□□□ 1.51
BRF1-214ENST00000549044 TEX13AQ9BXU3 409 aaPredicted RBP24.5■■□□□ 1.51
BRF1-214ENST00000549044 USP42Q9H9J4 1324 aaKnown RBP24.5■■□□□ 1.51
BRF1-214ENST00000549044 SENP3-EIF4A1A0A087X0R7 540 aa24.49■■□□□ 1.51
BRF1-214ENST00000549044 SNRPA1P09661 255 aaKnown RBP24.49■■□□□ 1.51
BRF1-214ENST00000549044 PIP4K2AP48426 406 aaPredicted RBP24.49■■□□□ 1.51
BRF1-214ENST00000549044 EIF4A1P60842 406 aaKnown RBP24.49■■□□□ 1.51
BRF1-214ENST00000549044 LMOD3Q0VAK6 560 aa24.49■■□□□ 1.51
BRF1-214ENST00000549044 COL15A1P39059 1388 aa24.49■■□□□ 1.51
BRF1-214ENST00000549044 EIF5P55010 431 aaKnown RBP24.48■■□□□ 1.51
BRF1-214ENST00000549044 MMP10P09238 476 aa24.47■■□□□ 1.51
BRF1-214ENST00000549044 FKBP8Q14318 412 aa24.47■■□□□ 1.51
BRF1-214ENST00000549044 NLGN2Q8NFZ4 835 aa24.47■■□□□ 1.51
BRF1-214ENST00000549044 USPL1Q5W0Q7 1092 aa24.46■■□□□ 1.51
BRF1-214ENST00000549044 TSPYL4Q9UJ04 414 aa24.46■■□□□ 1.51
BRF1-214ENST00000549044 NLGN1Q8N2Q7 840 aa24.45■■□□□ 1.5
BRF1-214ENST00000549044 BCL2L12Q9HB09 334 aa24.45■■□□□ 1.5
BRF1-214ENST00000549044 GIGYF1O75420 1035 aaPredicted RBP24.44■■□□□ 1.5
BRF1-214ENST00000549044 NBPF26B4DH59 902 aa24.43■■□□□ 1.5
BRF1-214ENST00000549044 NBPF10Q6P3W6 841 aaKnown RBP24.43■■□□□ 1.5
BRF1-214ENST00000549044 NBPF15Q8N660 670 aa24.43■■□□□ 1.5
BRF1-214ENST00000549044 NARFQ9UHQ1 456 aa24.43■■□□□ 1.5
BRF1-214ENST00000549044 ZNF330Q9Y3S2 320 aaPredicted RBP24.43■■□□□ 1.5
BRF1-214ENST00000549044 ZPR1O75312 459 aa24.42■■□□□ 1.5
BRF1-214ENST00000549044 LAS1LQ9Y4W2 734 aaKnown RBP24.42■■□□□ 1.5
BRF1-214ENST00000549044 CHL1O00533 1208 aa24.41■■□□□ 1.5
BRF1-214ENST00000549044 IL6STP40189 918 aaPredicted RBP24.41■■□□□ 1.5
BRF1-214ENST00000549044 DDR1Q08345 913 aa24.41■■□□□ 1.5
BRF1-214ENST00000549044 TBC1D2BQ9UPU7 963 aa24.41■■□□□ 1.5
BRF1-214ENST00000549044 TM4SF1P30408 202 aa24.39■■□□□ 1.49
BRF1-214ENST00000549044 KRT24Q2M2I5 525 aa24.39■■□□□ 1.49
BRF1-214ENST00000549044 BABAM1Q9NWV8 329 aa24.39■■□□□ 1.49
BRF1-214ENST00000549044 CD2APQ9Y5K6 639 aa24.38■■□□□ 1.49
BRF1-214ENST00000549044 A0A087WZG4 1122 aa24.37■■□□□ 1.49
BRF1-214ENST00000549044 LAMB4A4D0S4 1761 aa24.37■■□□□ 1.49
BRF1-214ENST00000549044 CAMTA2O94983 1202 aa24.36■■□□□ 1.49
BRF1-214ENST00000549044 NFIXQ14938 502 aa24.36■■□□□ 1.49
BRF1-214ENST00000549044 PARP3Q9Y6F1 533 aa24.36■■□□□ 1.49
BRF1-214ENST00000549044 POLRMTO00411 1230 aaKnown RBP24.35■■□□□ 1.49
BRF1-214ENST00000549044 ZNF853P0CG23 659 aa24.35■■□□□ 1.49
BRF1-214ENST00000549044 FAM9BQ8IZU0 186 aa24.35■■□□□ 1.49
BRF1-214ENST00000549044 DZIP3Q86Y13 1208 aaKnown RBP24.34■■□□□ 1.49
BRF1-214ENST00000549044 CFAP44Q96MT7 982 aa24.34■■□□□ 1.49
BRF1-214ENST00000549044 TBC1D9BQ66K14 1250 aa24.33■■□□□ 1.49
BRF1-214ENST00000549044 MBIPQ9NS73 344 aa24.33■■□□□ 1.49
BRF1-214ENST00000549044 C10orf71Q711Q0 1435 aa24.33■■□□□ 1.49
BRF1-214ENST00000549044 SCN7AQ01118 1682 aa24.33■■□□□ 1.49
BRF1-214ENST00000549044 BICDL1Q6ZP65 573 aa24.32■■□□□ 1.48
BRF1-214ENST00000549044 EIF2S2P20042 333 aaKnown RBP24.31■■□□□ 1.48
BRF1-214ENST00000549044 NGEFQ8N5V2 710 aa24.31■■□□□ 1.48
BRF1-214ENST00000549044 NECTIN2Q92692 538 aa24.31■■□□□ 1.48
BRF1-214ENST00000549044 WWC3Q9ULE0 1092 aa24.31■■□□□ 1.48
BRF1-214ENST00000549044 MYL6BP14649 208 aa24.3■■□□□ 1.48
BRF1-214ENST00000549044 PELP1Q8IZL8 1130 aaKnown RBP24.3■■□□□ 1.48
BRF1-214ENST00000549044 ANXA1P04083 346 aa24.29■■□□□ 1.48
BRF1-214ENST00000549044 YBX3P16989 372 aaKnown RBP eCLIP24.29■■□□□ 1.48
BRF1-214ENST00000549044 PDIA6Q15084 440 aa24.29■■□□□ 1.48
BRF1-214ENST00000549044 PROSER3Q2NL68 480 aa24.29■■□□□ 1.48
BRF1-214ENST00000549044 NPM2Q86SE8 214 aaKnown RBP24.29■■□□□ 1.48
BRF1-214ENST00000549044 WWC1Q8IX03 1113 aa24.29■■□□□ 1.48
BRF1-214ENST00000549044 IFT57Q9NWB7 429 aa24.29■■□□□ 1.48
BRF1-214ENST00000549044 SALL2Q9Y467 1007 aaPredicted RBP24.29■■□□□ 1.48
BRF1-214ENST00000549044 PXDNLA1KZ92 1463 aa24.29■■□□□ 1.48
BRF1-214ENST00000549044 GPR162Q16538 588 aa24.28■■□□□ 1.48
BRF1-214ENST00000549044 CCDC27Q2M243 656 aa24.28■■□□□ 1.48
BRF1-214ENST00000549044 TTLL7Q6ZT98 887 aa24.28■■□□□ 1.48
BRF1-214ENST00000549044 LRP10Q7Z4F1 713 aa24.28■■□□□ 1.48
BRF1-214ENST00000549044 BCORQ6W2J9 1755 aa24.28■■□□□ 1.48
BRF1-214ENST00000549044 KIF13BQ9NQT8 1826 aa24.28■■□□□ 1.48
BRF1-214ENST00000549044 KIAA1551Q9HCM1 1747 aa24.27■■□□□ 1.48
BRF1-214ENST00000549044 SERPINB2P05120 415 aa24.27■■□□□ 1.48
BRF1-214ENST00000549044 A0A0G2JLW4 131 aa24.26■■□□□ 1.47
BRF1-214ENST00000549044 DCAF8L1A6NGE4 600 aa24.26■■□□□ 1.47
BRF1-214ENST00000549044 GNAI1P63096 354 aa24.26■■□□□ 1.47
BRF1-214ENST00000549044 CALD1Q05682 793 aaKnown RBP24.26■■□□□ 1.47
BRF1-214ENST00000549044 HLFQ16534 295 aa24.26■■□□□ 1.47
BRF1-214ENST00000549044 ERBB4Q15303 1308 aa24.25■■□□□ 1.47
BRF1-214ENST00000549044 NRXN2Q9P2S2 1712 aa24.24■■□□□ 1.47
BRF1-214ENST00000549044 AFDNP55196 1824 aaKnown RBP24.24■■□□□ 1.47
BRF1-214ENST00000549044 DPEP1P16444 411 aa24.24■■□□□ 1.47
BRF1-214ENST00000549044 DUSP27Q5VZP5 1158 aa24.24■■□□□ 1.47
BRF1-214ENST00000549044 CARMIL3Q8ND23 1372 aa24.24■■□□□ 1.47
BRF1-214ENST00000549044 TGFB2P61812 414 aa24.23■■□□□ 1.47
BRF1-214ENST00000549044 CCDC24Q8N4L8 307 aa24.23■■□□□ 1.47
BRF1-214ENST00000549044 TSR2Q969E8 191 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms