RNA–Protein interactions for RNA: ENST00000548496.1

KRT18-205, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-205ENST00000548496 IFT57Q9NWB7 429 aa15.77■□□□□ 0.12
KRT18-205ENST00000548496 ZBTB1Q9Y2K1 713 aa15.77■□□□□ 0.12
KRT18-205ENST00000548496 UBR3Q6ZT12 1888 aa15.77■□□□□ 0.11
KRT18-205ENST00000548496 ZNF831Q5JPB2 1677 aa15.76■□□□□ 0.11
KRT18-205ENST00000548496 EIF2S2P20042 333 aaKnown RBP15.76■□□□□ 0.11
KRT18-205ENST00000548496 CALD1Q05682 793 aaKnown RBP15.76■□□□□ 0.11
KRT18-205ENST00000548496 CCDC87Q9NVE4 849 aa15.76■□□□□ 0.11
KRT18-205ENST00000548496 ZNF330Q9Y3S2 320 aaPredicted RBP15.76■□□□□ 0.11
KRT18-205ENST00000548496 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.75■□□□□ 0.11
KRT18-205ENST00000548496 ZBTB7AO95365 584 aa15.75■□□□□ 0.11
KRT18-205ENST00000548496 STARD3NLO95772 234 aa15.75■□□□□ 0.11
KRT18-205ENST00000548496 HNRNPUQ00839 825 aaKnown RBP eCLIP15.75■□□□□ 0.11
KRT18-205ENST00000548496 WDR63Q8IWG1 891 aa15.75■□□□□ 0.11
KRT18-205ENST00000548496 CDCA7LQ96GN5 454 aa15.75■□□□□ 0.11
KRT18-205ENST00000548496 BABAM1Q9NWV8 329 aa15.75■□□□□ 0.11
KRT18-205ENST00000548496 CNTNAP4Q9C0A0 1308 aa15.74■□□□□ 0.11
KRT18-205ENST00000548496 RPS6KA4O75676 772 aa15.74■□□□□ 0.11
KRT18-205ENST00000548496 RC3H1Q5TC82 1133 aaKnown RBP15.74■□□□□ 0.11
KRT18-205ENST00000548496 NGEFQ8N5V2 710 aa15.74■□□□□ 0.11
KRT18-205ENST00000548496 C8orf58Q8NAV2 365 aa15.74■□□□□ 0.11
KRT18-205ENST00000548496 ARXQ96QS3 562 aa15.74■□□□□ 0.11
KRT18-205ENST00000548496 TEX13AQ9BXU3 409 aaPredicted RBP15.74■□□□□ 0.11
KRT18-205ENST00000548496 ATF5Q9Y2D1 282 aaPredicted RBP15.74■□□□□ 0.11
KRT18-205ENST00000548496 RTCBQ9Y3I0 505 aaKnown RBP15.74■□□□□ 0.11
KRT18-205ENST00000548496 ANXA1P04083 346 aa15.73■□□□□ 0.11
KRT18-205ENST00000548496 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
KRT18-205ENST00000548496 TRAPPC3LQ5T215 181 aa15.73■□□□□ 0.11
KRT18-205ENST00000548496 DUSP27Q5VZP5 1158 aa15.73■□□□□ 0.11
KRT18-205ENST00000548496 MSL1Q68DK7 614 aa15.73■□□□□ 0.11
KRT18-205ENST00000548496 TSPYL6Q8N831 410 aa15.73■□□□□ 0.11
KRT18-205ENST00000548496 ARHGEF1Q92888 912 aaKnown RBP15.73■□□□□ 0.11
KRT18-205ENST00000548496 ZNF521Q96K83 1311 aa15.72■□□□□ 0.11
KRT18-205ENST00000548496 NBPF26B4DH59 902 aa15.72■□□□□ 0.11
KRT18-205ENST00000548496 TCERG1O14776 1098 aaKnown RBP15.72■□□□□ 0.11
KRT18-205ENST00000548496 NBPF10Q6P3W6 841 aaKnown RBP15.72■□□□□ 0.11
KRT18-205ENST00000548496 NBPF15Q8N660 670 aa15.72■□□□□ 0.11
KRT18-205ENST00000548496 SRP68Q9UHB9 627 aaKnown RBP15.72■□□□□ 0.11
KRT18-205ENST00000548496 IL16Q14005 1332 aa15.71■□□□□ 0.11
KRT18-205ENST00000548496 FANCIQ9NVI1 1328 aa15.71■□□□□ 0.11
KRT18-205ENST00000548496 MYL6BP14649 208 aa15.71■□□□□ 0.11
KRT18-205ENST00000548496 CASZ1Q86V15 1759 aa15.71■□□□□ 0.11
KRT18-205ENST00000548496 CICQ96RK0 1608 aaPredicted RBP15.71■□□□□ 0.11
KRT18-205ENST00000548496 SOS1Q07889 1333 aaPredicted RBP15.7■□□□□ 0.1
KRT18-205ENST00000548496 SSFA2P28290 1259 aa15.7■□□□□ 0.1
KRT18-205ENST00000548496 EXOSC9Q06265 439 aaKnown RBP15.7■□□□□ 0.1
KRT18-205ENST00000548496 GOLGA2Q08379 1002 aa15.7■□□□□ 0.1
KRT18-205ENST00000548496 PROSER3Q2NL68 480 aa15.7■□□□□ 0.1
KRT18-205ENST00000548496 TBC1D2BQ9UPU7 963 aa15.7■□□□□ 0.1
KRT18-205ENST00000548496 QSER1Q2KHR3 1735 aa15.7■□□□□ 0.1
KRT18-205ENST00000548496 LAMB4A4D0S4 1761 aa15.7■□□□□ 0.1
KRT18-205ENST00000548496 HMGB2P26583 209 aaKnown RBP15.69■□□□□ 0.1
KRT18-205ENST00000548496 RFC4P35249 363 aa15.69■□□□□ 0.1
KRT18-205ENST00000548496 EIF5P55010 431 aaKnown RBP15.69■□□□□ 0.1
KRT18-205ENST00000548496 C4AP0C0L4 1744 aa15.68■□□□□ 0.1
KRT18-205ENST00000548496 COL15A1P39059 1388 aa15.67■□□□□ 0.1
KRT18-205ENST00000548496 SLFN5Q08AF3 891 aa15.67■□□□□ 0.1
KRT18-205ENST00000548496 HDGFL1Q5TGJ6 251 aa15.67■□□□□ 0.1
KRT18-205ENST00000548496 FLAD1Q8NFF5 587 aa15.67■□□□□ 0.1
KRT18-205ENST00000548496 YTHDC1Q96MU7 727 aaKnown RBP15.67■□□□□ 0.1
KRT18-205ENST00000548496 CHPF2Q9P2E5 772 aa15.67■□□□□ 0.1
KRT18-205ENST00000548496 IL6STP40189 918 aaPredicted RBP15.66■□□□□ 0.1
KRT18-205ENST00000548496 PDIA6Q15084 440 aa15.66■□□□□ 0.1
KRT18-205ENST00000548496 TWISTNBQ3B726 338 aaPredicted RBP15.66■□□□□ 0.1
KRT18-205ENST00000548496 USPL1Q5W0Q7 1092 aa15.66■□□□□ 0.1
KRT18-205ENST00000548496 MYH16Q9H6N6 1097 aa15.66■□□□□ 0.1
KRT18-205ENST00000548496 ADRA2BP18089 450 aa15.65■□□□□ 0.1
KRT18-205ENST00000548496 AIMP1Q12904 312 aaKnown RBP15.65■□□□□ 0.1
KRT18-205ENST00000548496 TTLL7Q6ZT98 887 aa15.65■□□□□ 0.1
KRT18-205ENST00000548496 NPM2Q86SE8 214 aaKnown RBP15.65■□□□□ 0.1
KRT18-205ENST00000548496 E9PSI1 815 aa15.64■□□□□ 0.09
KRT18-205ENST00000548496 ZPR1O75312 459 aa15.64■□□□□ 0.09
KRT18-205ENST00000548496 GYS1P13807 737 aa15.64■□□□□ 0.09
KRT18-205ENST00000548496 FKBP8Q14318 412 aa15.64■□□□□ 0.09
KRT18-205ENST00000548496 DZIP3Q86Y13 1208 aaKnown RBP15.64■□□□□ 0.09
KRT18-205ENST00000548496 MTFR1LQ9H019 292 aa15.64■□□□□ 0.09
KRT18-205ENST00000548496 BCL2L12Q9HB09 334 aa15.64■□□□□ 0.09
KRT18-205ENST00000548496 SPON1Q9HCB6 807 aa15.64■□□□□ 0.09
KRT18-205ENST00000548496 NARFQ9UHQ1 456 aa15.64■□□□□ 0.09
KRT18-205ENST00000548496 VAMP4O75379 141 aa15.63■□□□□ 0.09
KRT18-205ENST00000548496 BICDL1Q6ZP65 573 aa15.63■□□□□ 0.09
KRT18-205ENST00000548496 SLC16A10Q8TF71 515 aa15.63■□□□□ 0.09
KRT18-205ENST00000548496 USP42Q9H9J4 1324 aaKnown RBP15.63■□□□□ 0.09
KRT18-205ENST00000548496 A0A087WZG4 1122 aa15.62■□□□□ 0.09
KRT18-205ENST00000548496 PTGER2P43116 358 aa15.62■□□□□ 0.09
KRT18-205ENST00000548496 COPS6Q7L5N1 327 aa15.62■□□□□ 0.09
KRT18-205ENST00000548496 XAGE3Q8WTP9 111 aa15.62■□□□□ 0.09
KRT18-205ENST00000548496 ZBTB3Q9H5J0 574 aa15.62■□□□□ 0.09
KRT18-205ENST00000548496 PHAXQ9H814 394 aaKnown RBP15.62■□□□□ 0.09
KRT18-205ENST00000548496 CAMTA2O94983 1202 aa15.61■□□□□ 0.09
KRT18-205ENST00000548496 HOXB7P09629 217 aa15.61■□□□□ 0.09
KRT18-205ENST00000548496 HLFQ16534 295 aa15.61■□□□□ 0.09
KRT18-205ENST00000548496 LRP10Q7Z4F1 713 aa15.61■□□□□ 0.09
KRT18-205ENST00000548496 TRMT2AQ8IZ69 625 aaKnown RBP15.61■□□□□ 0.09
KRT18-205ENST00000548496 KLHL34Q8N239 644 aa15.61■□□□□ 0.09
KRT18-205ENST00000548496 ZNF428Q96B54 188 aa15.61■□□□□ 0.09
KRT18-205ENST00000548496 DDX21Q9NR30 783 aaKnown RBP eCLIP15.61■□□□□ 0.09
KRT18-205ENST00000548496 CCDC30Q5VVM6 783 aa15.6■□□□□ 0.09
KRT18-205ENST00000548496 G2E3Q7L622 706 aa15.6■□□□□ 0.09
KRT18-205ENST00000548496 DBF4Q9UBU7 674 aaPredicted RBP15.6■□□□□ 0.09
KRT18-205ENST00000548496 MMP10P09238 476 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms