RNA–Protein interactions for RNA: ENST00000547630.1

C12orf49-203, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 1 (best)

Gene C12orf49, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-203ENST00000547630 CCDC87Q9NVE4 849 aa26.81■■□□□ 1.88
C12orf49-203ENST00000547630 RTCBQ9Y3I0 505 aaKnown RBP26.81■■□□□ 1.88
C12orf49-203ENST00000547630 IFT57Q9NWB7 429 aa26.8■■□□□ 1.88
C12orf49-203ENST00000547630 USP16Q9Y5T5 823 aa26.8■■□□□ 1.88
C12orf49-203ENST00000547630 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.79■■□□□ 1.88
C12orf49-203ENST00000547630 RPS6KA4O75676 772 aa26.79■■□□□ 1.88
C12orf49-203ENST00000547630 ZNF853P0CG23 659 aa26.79■■□□□ 1.88
C12orf49-203ENST00000547630 SSFA2P28290 1259 aa26.79■■□□□ 1.88
C12orf49-203ENST00000547630 FLAD1Q8NFF5 587 aa26.79■■□□□ 1.88
C12orf49-203ENST00000547630 GNAI1P63096 354 aa26.78■■□□□ 1.88
C12orf49-203ENST00000547630 GIGYF1O75420 1035 aaPredicted RBP26.77■■□□□ 1.88
C12orf49-203ENST00000547630 NGEFQ8N5V2 710 aa26.77■■□□□ 1.88
C12orf49-203ENST00000547630 MBIPQ9NS73 344 aa26.77■■□□□ 1.88
C12orf49-203ENST00000547630 ZBTB1Q9Y2K1 713 aa26.77■■□□□ 1.88
C12orf49-203ENST00000547630 ZBTB7AO95365 584 aa26.76■■□□□ 1.87
C12orf49-203ENST00000547630 TRAPPC3LQ5T215 181 aa26.75■■□□□ 1.87
C12orf49-203ENST00000547630 A1BGP04217 495 aa26.74■■□□□ 1.87
C12orf49-203ENST00000547630 CANXP27824 592 aaKnown RBP26.74■■□□□ 1.87
C12orf49-203ENST00000547630 KRT24Q2M2I5 525 aa26.73■■□□□ 1.87
C12orf49-203ENST00000547630 WDR63Q8IWG1 891 aa26.73■■□□□ 1.87
C12orf49-203ENST00000547630 SLC16A10Q8TF71 515 aa26.73■■□□□ 1.87
C12orf49-203ENST00000547630 ATF5Q9Y2D1 282 aaPredicted RBP26.73■■□□□ 1.87
C12orf49-203ENST00000547630 ARHGEF1Q92888 912 aaKnown RBP26.72■■□□□ 1.87
C12orf49-203ENST00000547630 SOS1Q07889 1333 aaPredicted RBP26.72■■□□□ 1.87
C12orf49-203ENST00000547630 IL16Q14005 1332 aa26.72■■□□□ 1.87
C12orf49-203ENST00000547630 LAMB4A4D0S4 1761 aa26.72■■□□□ 1.87
C12orf49-203ENST00000547630 ADRA2BP18089 450 aa26.71■■□□□ 1.87
C12orf49-203ENST00000547630 MTFR1LQ9H019 292 aa26.71■■□□□ 1.87
C12orf49-203ENST00000547630 PIP4K2AP48426 406 aaPredicted RBP26.71■■□□□ 1.87
C12orf49-203ENST00000547630 SPON1Q9HCB6 807 aa26.71■■□□□ 1.87
C12orf49-203ENST00000547630 TSR2Q969E8 191 aaKnown RBP26.7■■□□□ 1.86
C12orf49-203ENST00000547630 RFC4P35249 363 aa26.69■■□□□ 1.86
C12orf49-203ENST00000547630 ZNF330Q9Y3S2 320 aaPredicted RBP26.69■■□□□ 1.86
C12orf49-203ENST00000547630 COL15A1P39059 1388 aa26.68■■□□□ 1.86
C12orf49-203ENST00000547630 EIF2S2P20042 333 aaKnown RBP26.68■■□□□ 1.86
C12orf49-203ENST00000547630 EIF5P55010 431 aaKnown RBP26.68■■□□□ 1.86
C12orf49-203ENST00000547630 ZNF521Q96K83 1311 aa26.67■■□□□ 1.86
C12orf49-203ENST00000547630 IL6STP40189 918 aaPredicted RBP26.67■■□□□ 1.86
C12orf49-203ENST00000547630 MSL1Q68DK7 614 aa26.67■■□□□ 1.86
C12orf49-203ENST00000547630 C4AP0C0L4 1744 aa26.66■■□□□ 1.86
C12orf49-203ENST00000547630 NBPF26B4DH59 902 aa26.66■■□□□ 1.86
C12orf49-203ENST00000547630 NBPF10Q6P3W6 841 aaKnown RBP26.66■■□□□ 1.86
C12orf49-203ENST00000547630 NBPF15Q8N660 670 aa26.66■■□□□ 1.86
C12orf49-203ENST00000547630 SPINK5Q9NQ38 1064 aaPredicted RBP26.66■■□□□ 1.86
C12orf49-203ENST00000547630 DUSP27Q5VZP5 1158 aa26.65■■□□□ 1.86
C12orf49-203ENST00000547630 SRP68Q9UHB9 627 aaKnown RBP26.65■■□□□ 1.86
C12orf49-203ENST00000547630 ELL2O00472 640 aaPredicted RBP26.64■■□□□ 1.86
C12orf49-203ENST00000547630 NECTIN2Q92692 538 aa26.64■■□□□ 1.86
C12orf49-203ENST00000547630 NPM2Q86SE8 214 aaKnown RBP26.63■■□□□ 1.85
C12orf49-203ENST00000547630 C8orf58Q8NAV2 365 aa26.63■■□□□ 1.85
C12orf49-203ENST00000547630 LRP5O75197 1615 aa26.63■■□□□ 1.85
C12orf49-203ENST00000547630 USP42Q9H9J4 1324 aaKnown RBP26.63■■□□□ 1.85
C12orf49-203ENST00000547630 FANCIQ9NVI1 1328 aa26.63■■□□□ 1.85
C12orf49-203ENST00000547630 A0A087WZG4 1122 aa26.62■■□□□ 1.85
C12orf49-203ENST00000547630 HOXB7P09629 217 aa26.62■■□□□ 1.85
C12orf49-203ENST00000547630 PTGER2P43116 358 aa26.62■■□□□ 1.85
C12orf49-203ENST00000547630 ZPR1O75312 459 aa26.61■■□□□ 1.85
C12orf49-203ENST00000547630 GYS1P13807 737 aa26.61■■□□□ 1.85
C12orf49-203ENST00000547630 ARXQ96QS3 562 aa26.61■■□□□ 1.85
C12orf49-203ENST00000547630 MYL6BP14649 208 aa26.6■■□□□ 1.85
C12orf49-203ENST00000547630 USPL1Q5W0Q7 1092 aa26.6■■□□□ 1.85
C12orf49-203ENST00000547630 SGIP1Q9BQI5 828 aa26.6■■□□□ 1.85
C12orf49-203ENST00000547630 NARFQ9UHQ1 456 aa26.6■■□□□ 1.85
C12orf49-203ENST00000547630 TBC1D2BQ9UPU7 963 aa26.6■■□□□ 1.85
C12orf49-203ENST00000547630 GOLGA2Q08379 1002 aa26.59■■□□□ 1.85
C12orf49-203ENST00000547630 HDGFL1Q5TGJ6 251 aa26.59■■□□□ 1.85
C12orf49-203ENST00000547630 TSPYL6Q8N831 410 aa26.59■■□□□ 1.85
C12orf49-203ENST00000547630 MYH16Q9H6N6 1097 aa26.59■■□□□ 1.85
C12orf49-203ENST00000547630 COL24A1Q17RW2 1714 aa26.59■■□□□ 1.85
C12orf49-203ENST00000547630 ERBB4Q15303 1308 aa26.59■■□□□ 1.85
C12orf49-203ENST00000547630 POLD1P28340 1107 aa26.58■■□□□ 1.85
C12orf49-203ENST00000547630 HNRNPUQ00839 825 aaKnown RBP eCLIP26.58■■□□□ 1.85
C12orf49-203ENST00000547630 PDIA6Q15084 440 aa26.58■■□□□ 1.84
C12orf49-203ENST00000547630 DZIP3Q86Y13 1208 aaKnown RBP26.58■■□□□ 1.84
C12orf49-203ENST00000547630 ANXA1P04083 346 aa26.57■■□□□ 1.84
C12orf49-203ENST00000547630 NLGN1Q8N2Q7 840 aa26.57■■□□□ 1.84
C12orf49-203ENST00000547630 FKBP8Q14318 412 aa26.56■■□□□ 1.84
C12orf49-203ENST00000547630 PROSER3Q2NL68 480 aa26.56■■□□□ 1.84
C12orf49-203ENST00000547630 PPP1R1BQ9UD71 204 aaPredicted RBP26.56■■□□□ 1.84
C12orf49-203ENST00000547630 EXOSC9Q06265 439 aaKnown RBP26.55■■□□□ 1.84
C12orf49-203ENST00000547630 TWISTNBQ3B726 338 aaPredicted RBP26.55■■□□□ 1.84
C12orf49-203ENST00000547630 BCL2L12Q9HB09 334 aa26.55■■□□□ 1.84
C12orf49-203ENST00000547630 CHPF2Q9P2E5 772 aa26.55■■□□□ 1.84
C12orf49-203ENST00000547630 E9PSI1 815 aa26.54■■□□□ 1.84
C12orf49-203ENST00000547630 CDCA7LQ96GN5 454 aa26.54■■□□□ 1.84
C12orf49-203ENST00000547630 DDX21Q9NR30 783 aaKnown RBP eCLIP26.54■■□□□ 1.84
C12orf49-203ENST00000547630 CAMTA2O94983 1202 aa26.53■■□□□ 1.84
C12orf49-203ENST00000547630 SLFN5Q08AF3 891 aa26.53■■□□□ 1.84
C12orf49-203ENST00000547630 LRP10Q7Z4F1 713 aa26.53■■□□□ 1.84
C12orf49-203ENST00000547630 MMP10P09238 476 aa26.52■■□□□ 1.84
C12orf49-203ENST00000547630 TTLL7Q6ZT98 887 aa26.52■■□□□ 1.84
C12orf49-203ENST00000547630 SRCAPQ6ZRS2 3230 aa26.51■■□□□ 1.83
C12orf49-203ENST00000547630 SCN7AQ01118 1682 aa26.51■■□□□ 1.83
C12orf49-203ENST00000547630 DBF4Q9UBU7 674 aaPredicted RBP26.51■■□□□ 1.83
C12orf49-203ENST00000547630 CCDC30Q5VVM6 783 aa26.5■■□□□ 1.83
C12orf49-203ENST00000547630 BCORQ6W2J9 1755 aa26.5■■□□□ 1.83
C12orf49-203ENST00000547630 CHMP4AQ9BY43 222 aa26.49■■□□□ 1.83
C12orf49-203ENST00000547630 AIMP1Q12904 312 aaKnown RBP26.48■■□□□ 1.83
C12orf49-203ENST00000547630 KIF6Q6ZMV9 814 aa26.48■■□□□ 1.83
C12orf49-203ENST00000547630 TCERG1O14776 1098 aaKnown RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms