RNA–Protein interactions for RNA: ENST00000546860.2

CR383656.9-201, humanhuman

BASIC

Gene CR383656.9, Length 1,178 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.9-201ENST00000546860 MIS18AQ9NYP9 233 aa15.36■□□□□ 0.05
CR383656.9-201ENST00000546860 NRXN2Q9P2S2 1712 aa15.36■□□□□ 0.05
CR383656.9-201ENST00000546860 N4BP2Q86UW6 1770 aaPredicted RBP15.36■□□□□ 0.05
CR383656.9-201ENST00000546860 NEUROD2Q15784 382 aa15.35■□□□□ 0.05
CR383656.9-201ENST00000546860 FMNL2Q96PY5 1086 aa15.35■□□□□ 0.05
CR383656.9-201ENST00000546860 TRIM35Q9UPQ4 493 aa15.35■□□□□ 0.05
CR383656.9-201ENST00000546860 BRCA1P38398 1863 aaKnown RBP15.35■□□□□ 0.05
CR383656.9-201ENST00000546860 HMGB2P26583 209 aaKnown RBP15.34■□□□□ 0.05
CR383656.9-201ENST00000546860 TAF7Q15545 349 aaPredicted RBP15.34■□□□□ 0.05
CR383656.9-201ENST00000546860 ARHGEF1Q92888 912 aaKnown RBP15.34■□□□□ 0.05
CR383656.9-201ENST00000546860 ARXQ96QS3 562 aa15.34■□□□□ 0.05
CR383656.9-201ENST00000546860 FHDC1Q9C0D6 1143 aaPredicted RBP15.34■□□□□ 0.05
CR383656.9-201ENST00000546860 MRS2Q9HD23 443 aa15.34■□□□□ 0.05
CR383656.9-201ENST00000546860 SRP68Q9UHB9 627 aaKnown RBP15.34■□□□□ 0.05
CR383656.9-201ENST00000546860 SENP3-EIF4A1A0A087X0R7 540 aa15.33■□□□□ 0.04
CR383656.9-201ENST00000546860 USP42Q9H9J4 1324 aaKnown RBP15.33■□□□□ 0.04
CR383656.9-201ENST00000546860 GYS1P13807 737 aa15.32■□□□□ 0.04
CR383656.9-201ENST00000546860 PIP4K2AP48426 406 aaPredicted RBP15.32■□□□□ 0.04
CR383656.9-201ENST00000546860 TRAPPC3LQ5T215 181 aa15.32■□□□□ 0.04
CR383656.9-201ENST00000546860 PNISRQ8TF01 805 aaKnown RBP15.32■□□□□ 0.04
CR383656.9-201ENST00000546860 ANKRD31Q8N7Z5 1873 aa15.31■□□□□ 0.04
CR383656.9-201ENST00000546860 APAF1O14727 1248 aa15.31■□□□□ 0.04
CR383656.9-201ENST00000546860 POLD1P28340 1107 aa15.31■□□□□ 0.04
CR383656.9-201ENST00000546860 USP16Q9Y5T5 823 aa15.31■□□□□ 0.04
CR383656.9-201ENST00000546860 DLEC1Q9Y238 1755 aa15.31■□□□□ 0.04
CR383656.9-201ENST00000546860 NUP98P52948 1817 aa15.31■□□□□ 0.04
CR383656.9-201ENST00000546860 A1BGP04217 495 aa15.3■□□□□ 0.04
CR383656.9-201ENST00000546860 CANXP27824 592 aaKnown RBP15.3■□□□□ 0.04
CR383656.9-201ENST00000546860 LMOD3Q0VAK6 560 aa15.3■□□□□ 0.04
CR383656.9-201ENST00000546860 GOLGB1Q14789 3259 aaKnown RBP15.3■□□□□ 0.04
CR383656.9-201ENST00000546860 ANKRD36CQ5JPF3 1778 aa15.3■□□□□ 0.04
CR383656.9-201ENST00000546860 COL11A2P13942 1736 aaPredicted RBP15.29■□□□□ 0.04
CR383656.9-201ENST00000546860 UTRNP46939 3433 aa15.29■□□□□ 0.04
CR383656.9-201ENST00000546860 C10orf71Q711Q0 1435 aa15.29■□□□□ 0.04
CR383656.9-201ENST00000546860 RFC4P35249 363 aa15.29■□□□□ 0.04
CR383656.9-201ENST00000546860 EIF4A1P60842 406 aaKnown RBP15.29■□□□□ 0.04
CR383656.9-201ENST00000546860 KLHL34Q8N239 644 aa15.29■□□□□ 0.04
CR383656.9-201ENST00000546860 NLGN2Q8NFZ4 835 aa15.29■□□□□ 0.04
CR383656.9-201ENST00000546860 SYT17Q9BSW7 474 aa15.29■□□□□ 0.04
CR383656.9-201ENST00000546860 TSPYL4Q9UJ04 414 aa15.29■□□□□ 0.04
CR383656.9-201ENST00000546860 STARD3NLO95772 234 aa15.28■□□□□ 0.04
CR383656.9-201ENST00000546860 EIF5P55010 431 aaKnown RBP15.28■□□□□ 0.04
CR383656.9-201ENST00000546860 CACNA1SQ13698 1873 aa15.27■□□□□ 0.04
CR383656.9-201ENST00000546860 MMP10P09238 476 aa15.27■□□□□ 0.04
CR383656.9-201ENST00000546860 SNRPA1P09661 255 aaKnown RBP15.27■□□□□ 0.04
CR383656.9-201ENST00000546860 FKBP8Q14318 412 aa15.27■□□□□ 0.04
CR383656.9-201ENST00000546860 USPL1Q5W0Q7 1092 aa15.27■□□□□ 0.04
CR383656.9-201ENST00000546860 TEX13AQ9BXU3 409 aaPredicted RBP15.27■□□□□ 0.04
CR383656.9-201ENST00000546860 BCL2L12Q9HB09 334 aa15.27■□□□□ 0.04
CR383656.9-201ENST00000546860 NBPF26B4DH59 902 aa15.26■□□□□ 0.03
CR383656.9-201ENST00000546860 GIGYF1O75420 1035 aaPredicted RBP15.26■□□□□ 0.03
CR383656.9-201ENST00000546860 DDR1Q08345 913 aa15.26■□□□□ 0.03
CR383656.9-201ENST00000546860 KRT24Q2M2I5 525 aa15.26■□□□□ 0.03
CR383656.9-201ENST00000546860 NBPF10Q6P3W6 841 aaKnown RBP15.26■□□□□ 0.03
CR383656.9-201ENST00000546860 PIAS4Q8N2W9 510 aaPredicted RBP15.26■□□□□ 0.03
CR383656.9-201ENST00000546860 NBPF15Q8N660 670 aa15.26■□□□□ 0.03
CR383656.9-201ENST00000546860 ZNF330Q9Y3S2 320 aaPredicted RBP15.26■□□□□ 0.03
CR383656.9-201ENST00000546860 PXDNLA1KZ92 1463 aa15.26■□□□□ 0.03
CR383656.9-201ENST00000546860 CHD4Q14839 1912 aa15.25■□□□□ 0.03
CR383656.9-201ENST00000546860 NARFQ9UHQ1 456 aa15.25■□□□□ 0.03
CR383656.9-201ENST00000546860 ARFGEF2Q9Y6D5 1785 aa15.25■□□□□ 0.03
CR383656.9-201ENST00000546860 IL6STP40189 918 aaPredicted RBP15.24■□□□□ 0.03
CR383656.9-201ENST00000546860 LAS1LQ9Y4W2 734 aaKnown RBP15.24■□□□□ 0.03
CR383656.9-201ENST00000546860 ARFGEF1Q9Y6D6 1849 aa15.24■□□□□ 0.03
CR383656.9-201ENST00000546860 TNRC6CQ9HCJ0 1690 aaKnown RBP15.23■□□□□ 0.03
CR383656.9-201ENST00000546860 CHL1O00533 1208 aa15.23■□□□□ 0.03
CR383656.9-201ENST00000546860 TBC1D2BQ9UPU7 963 aa15.23■□□□□ 0.03
CR383656.9-201ENST00000546860 CARMIL3Q8ND23 1372 aa15.23■□□□□ 0.03
CR383656.9-201ENST00000546860 POLRMTO00411 1230 aaKnown RBP15.22■□□□□ 0.03
CR383656.9-201ENST00000546860 ZPR1O75312 459 aa15.22■□□□□ 0.03
CR383656.9-201ENST00000546860 CAMTA2O94983 1202 aa15.22■□□□□ 0.03
CR383656.9-201ENST00000546860 ZNF853P0CG23 659 aa15.22■□□□□ 0.03
CR383656.9-201ENST00000546860 FAM9BQ8IZU0 186 aa15.22■□□□□ 0.03
CR383656.9-201ENST00000546860 NLGN1Q8N2Q7 840 aa15.22■□□□□ 0.03
CR383656.9-201ENST00000546860 MBIPQ9NS73 344 aa15.22■□□□□ 0.03
CR383656.9-201ENST00000546860 BABAM1Q9NWV8 329 aa15.22■□□□□ 0.03
CR383656.9-201ENST00000546860 NFIXQ14938 502 aa15.21■□□□□ 0.03
CR383656.9-201ENST00000546860 TM4SF1P30408 202 aa15.2■□□□□ 0.02
CR383656.9-201ENST00000546860 DZIP3Q86Y13 1208 aaKnown RBP15.2■□□□□ 0.02
CR383656.9-201ENST00000546860 CFAP44Q96MT7 982 aa15.2■□□□□ 0.02
CR383656.9-201ENST00000546860 A0A087WZG4 1122 aa15.19■□□□□ 0.02
CR383656.9-201ENST00000546860 ANXA1P04083 346 aa15.19■□□□□ 0.02
CR383656.9-201ENST00000546860 PROSER3Q2NL68 480 aa15.19■□□□□ 0.02
CR383656.9-201ENST00000546860 TBC1D9BQ66K14 1250 aa15.19■□□□□ 0.02
CR383656.9-201ENST00000546860 LRP10Q7Z4F1 713 aa15.19■□□□□ 0.02
CR383656.9-201ENST00000546860 NECTIN2Q92692 538 aa15.19■□□□□ 0.02
CR383656.9-201ENST00000546860 IFT57Q9NWB7 429 aa15.19■□□□□ 0.02
CR383656.9-201ENST00000546860 CD2APQ9Y5K6 639 aa15.19■□□□□ 0.02
CR383656.9-201ENST00000546860 PARP3Q9Y6F1 533 aa15.19■□□□□ 0.02
CR383656.9-201ENST00000546860 LAMB2P55268 1798 aa15.19■□□□□ 0.02
CR383656.9-201ENST00000546860 MYL6BP14649 208 aa15.18■□□□□ 0.02
CR383656.9-201ENST00000546860 PDIA6Q15084 440 aa15.18■□□□□ 0.02
CR383656.9-201ENST00000546860 CCDC27Q2M243 656 aa15.18■□□□□ 0.02
CR383656.9-201ENST00000546860 BICDL1Q6ZP65 573 aa15.18■□□□□ 0.02
CR383656.9-201ENST00000546860 WWC1Q8IX03 1113 aa15.18■□□□□ 0.02
CR383656.9-201ENST00000546860 WWC3Q9ULE0 1092 aa15.18■□□□□ 0.02
CR383656.9-201ENST00000546860 EIF2S2P20042 333 aaKnown RBP15.17■□□□□ 0.02
CR383656.9-201ENST00000546860 NGEFQ8N5V2 710 aa15.17■□□□□ 0.02
CR383656.9-201ENST00000546860 SALL2Q9Y467 1007 aaPredicted RBP15.17■□□□□ 0.02
CR383656.9-201ENST00000546860 ERBB4Q15303 1308 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms