RNA–Protein interactions for RNA: ENST00000546843.2

R3HDM2-209, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 823 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-209ENST00000546843 SOS1Q07889 1333 aaPredicted RBP22.06■■□□□ 1.12
R3HDM2-209ENST00000546843 PRAMEF22A3QJZ6 481 aa22.06■■□□□ 1.12
R3HDM2-209ENST00000546843 RFC4P35249 363 aa22.06■■□□□ 1.12
R3HDM2-209ENST00000546843 SRP68Q9UHB9 627 aaKnown RBP22.06■■□□□ 1.12
R3HDM2-209ENST00000546843 C4AP0C0L4 1744 aa22.06■■□□□ 1.12
R3HDM2-209ENST00000546843 CANXP27824 592 aaKnown RBP22.05■■□□□ 1.12
R3HDM2-209ENST00000546843 SYT17Q9BSW7 474 aa22.05■■□□□ 1.12
R3HDM2-209ENST00000546843 MRS2Q9HD23 443 aa22.05■■□□□ 1.12
R3HDM2-209ENST00000546843 STARD3NLO95772 234 aa22.04■■□□□ 1.12
R3HDM2-209ENST00000546843 LMOD3Q0VAK6 560 aa22.03■■□□□ 1.12
R3HDM2-209ENST00000546843 COL15A1P39059 1388 aa22.02■■□□□ 1.12
R3HDM2-209ENST00000546843 GYS1P13807 737 aa22.02■■□□□ 1.12
R3HDM2-209ENST00000546843 USP42Q9H9J4 1324 aaKnown RBP22.02■■□□□ 1.12
R3HDM2-209ENST00000546843 A1BGP04217 495 aa22.01■■□□□ 1.11
R3HDM2-209ENST00000546843 PIP4K2AP48426 406 aaPredicted RBP22.01■■□□□ 1.11
R3HDM2-209ENST00000546843 PNISRQ8TF01 805 aaKnown RBP22.01■■□□□ 1.11
R3HDM2-209ENST00000546843 TEX13AQ9BXU3 409 aaPredicted RBP22.01■■□□□ 1.11
R3HDM2-209ENST00000546843 ZNF330Q9Y3S2 320 aaPredicted RBP22.01■■□□□ 1.11
R3HDM2-209ENST00000546843 USP16Q9Y5T5 823 aa22.01■■□□□ 1.11
R3HDM2-209ENST00000546843 KDM3BQ7LBC6 1761 aa22.01■■□□□ 1.11
R3HDM2-209ENST00000546843 SENP3-EIF4A1A0A087X0R7 540 aa22■■□□□ 1.11
R3HDM2-209ENST00000546843 APAF1O14727 1248 aa22■■□□□ 1.11
R3HDM2-209ENST00000546843 MMP10P09238 476 aa22■■□□□ 1.11
R3HDM2-209ENST00000546843 SNRPA1P09661 255 aaKnown RBP22■■□□□ 1.11
R3HDM2-209ENST00000546843 TRIM35Q9UPQ4 493 aa22■■□□□ 1.11
R3HDM2-209ENST00000546843 NLGN2Q8NFZ4 835 aa21.99■■□□□ 1.11
R3HDM2-209ENST00000546843 TSPYL4Q9UJ04 414 aa21.99■■□□□ 1.11
R3HDM2-209ENST00000546843 EIF4A1P60842 406 aaKnown RBP21.98■■□□□ 1.11
R3HDM2-209ENST00000546843 FKBP8Q14318 412 aa21.98■■□□□ 1.11
R3HDM2-209ENST00000546843 USPL1Q5W0Q7 1092 aa21.98■■□□□ 1.11
R3HDM2-209ENST00000546843 NLGN1Q8N2Q7 840 aa21.97■■□□□ 1.11
R3HDM2-209ENST00000546843 ZPR1O75312 459 aa21.96■■□□□ 1.11
R3HDM2-209ENST00000546843 EIF5P55010 431 aaKnown RBP21.96■■□□□ 1.11
R3HDM2-209ENST00000546843 LAS1LQ9Y4W2 734 aaKnown RBP21.96■■□□□ 1.11
R3HDM2-209ENST00000546843 NARFQ9UHQ1 456 aa21.94■■□□□ 1.1
R3HDM2-209ENST00000546843 GIGYF1O75420 1035 aaPredicted RBP21.93■■□□□ 1.1
R3HDM2-209ENST00000546843 IL6STP40189 918 aaPredicted RBP21.93■■□□□ 1.1
R3HDM2-209ENST00000546843 BCL2L12Q9HB09 334 aa21.93■■□□□ 1.1
R3HDM2-209ENST00000546843 DDR1Q08345 913 aa21.92■■□□□ 1.1
R3HDM2-209ENST00000546843 TBC1D2BQ9UPU7 963 aa21.92■■□□□ 1.1
R3HDM2-209ENST00000546843 LAMB4A4D0S4 1761 aa21.92■■□□□ 1.1
R3HDM2-209ENST00000546843 NBPF26B4DH59 902 aa21.91■■□□□ 1.1
R3HDM2-209ENST00000546843 NBPF10Q6P3W6 841 aaKnown RBP21.91■■□□□ 1.1
R3HDM2-209ENST00000546843 PELP1Q8IZL8 1130 aaKnown RBP21.91■■□□□ 1.1
R3HDM2-209ENST00000546843 NBPF15Q8N660 670 aa21.91■■□□□ 1.1
R3HDM2-209ENST00000546843 CD2APQ9Y5K6 639 aa21.91■■□□□ 1.1
R3HDM2-209ENST00000546843 PARP3Q9Y6F1 533 aa21.91■■□□□ 1.1
R3HDM2-209ENST00000546843 A0A087WZG4 1122 aa21.9■■□□□ 1.1
R3HDM2-209ENST00000546843 KRT24Q2M2I5 525 aa21.9■■□□□ 1.1
R3HDM2-209ENST00000546843 NPM2Q86SE8 214 aaKnown RBP21.9■■□□□ 1.1
R3HDM2-209ENST00000546843 SCN7AQ01118 1682 aa21.89■■□□□ 1.1
R3HDM2-209ENST00000546843 NFIXQ14938 502 aa21.89■■□□□ 1.09
R3HDM2-209ENST00000546843 WWC3Q9ULE0 1092 aa21.89■■□□□ 1.09
R3HDM2-209ENST00000546843 C10orf71Q711Q0 1435 aa21.89■■□□□ 1.09
R3HDM2-209ENST00000546843 DCAF8L1A6NGE4 600 aa21.88■■□□□ 1.09
R3HDM2-209ENST00000546843 CHL1O00533 1208 aa21.88■■□□□ 1.09
R3HDM2-209ENST00000546843 BICDL1Q6ZP65 573 aa21.88■■□□□ 1.09
R3HDM2-209ENST00000546843 DZIP3Q86Y13 1208 aaKnown RBP21.88■■□□□ 1.09
R3HDM2-209ENST00000546843 FAM9BQ8IZU0 186 aa21.88■■□□□ 1.09
R3HDM2-209ENST00000546843 BABAM1Q9NWV8 329 aa21.88■■□□□ 1.09
R3HDM2-209ENST00000546843 POLRMTO00411 1230 aaKnown RBP21.87■■□□□ 1.09
R3HDM2-209ENST00000546843 CAMTA2O94983 1202 aa21.87■■□□□ 1.09
R3HDM2-209ENST00000546843 TM4SF1P30408 202 aa21.86■■□□□ 1.09
R3HDM2-209ENST00000546843 NGEFQ8N5V2 710 aa21.86■■□□□ 1.09
R3HDM2-209ENST00000546843 EIF2S2P20042 333 aaKnown RBP21.85■■□□□ 1.09
R3HDM2-209ENST00000546843 GPR162Q16538 588 aa21.85■■□□□ 1.09
R3HDM2-209ENST00000546843 TBC1D9BQ66K14 1250 aa21.85■■□□□ 1.09
R3HDM2-209ENST00000546843 NECTIN2Q92692 538 aa21.85■■□□□ 1.09
R3HDM2-209ENST00000546843 MYL6BP14649 208 aa21.84■■□□□ 1.09
R3HDM2-209ENST00000546843 CFAP44Q96MT7 982 aa21.84■■□□□ 1.09
R3HDM2-209ENST00000546843 MBIPQ9NS73 344 aa21.84■■□□□ 1.09
R3HDM2-209ENST00000546843 PXDNLA1KZ92 1463 aa21.83■■□□□ 1.09
R3HDM2-209ENST00000546843 SALL2Q9Y467 1007 aaPredicted RBP21.83■■□□□ 1.09
R3HDM2-209ENST00000546843 BCORQ6W2J9 1755 aa21.83■■□□□ 1.09
R3HDM2-209ENST00000546843 ANXA1P04083 346 aa21.82■■□□□ 1.08
R3HDM2-209ENST00000546843 YBX3P16989 372 aaKnown RBP eCLIP21.82■■□□□ 1.08
R3HDM2-209ENST00000546843 IFT57Q9NWB7 429 aa21.82■■□□□ 1.08
R3HDM2-209ENST00000546843 ZNF853P0CG23 659 aa21.81■■□□□ 1.08
R3HDM2-209ENST00000546843 CALD1Q05682 793 aaKnown RBP21.81■■□□□ 1.08
R3HDM2-209ENST00000546843 SERPINB2P05120 415 aa21.8■■□□□ 1.08
R3HDM2-209ENST00000546843 PROSER3Q2NL68 480 aa21.8■■□□□ 1.08
R3HDM2-209ENST00000546843 KIAA1551Q9HCM1 1747 aa21.8■■□□□ 1.08
R3HDM2-209ENST00000546843 CARMIL3Q8ND23 1372 aa21.79■■□□□ 1.08
R3HDM2-209ENST00000546843 KIF13BQ9NQT8 1826 aa21.79■■□□□ 1.08
R3HDM2-209ENST00000546843 A0A0G2JLW4 131 aa21.79■■□□□ 1.08
R3HDM2-209ENST00000546843 GNAI1P63096 354 aa21.79■■□□□ 1.08
R3HDM2-209ENST00000546843 TTLL7Q6ZT98 887 aa21.79■■□□□ 1.08
R3HDM2-209ENST00000546843 WWC1Q8IX03 1113 aa21.79■■□□□ 1.08
R3HDM2-209ENST00000546843 ERBB4Q15303 1308 aa21.79■■□□□ 1.08
R3HDM2-209ENST00000546843 DPEP1P16444 411 aa21.78■■□□□ 1.08
R3HDM2-209ENST00000546843 HLFQ16534 295 aa21.78■■□□□ 1.08
R3HDM2-209ENST00000546843 CCDC24Q8N4L8 307 aa21.78■■□□□ 1.08
R3HDM2-209ENST00000546843 TGFB2P61812 414 aa21.77■■□□□ 1.08
R3HDM2-209ENST00000546843 PDIA6Q15084 440 aa21.77■■□□□ 1.08
R3HDM2-209ENST00000546843 CCDC27Q2M243 656 aa21.77■■□□□ 1.08
R3HDM2-209ENST00000546843 DUSP27Q5VZP5 1158 aa21.77■■□□□ 1.08
R3HDM2-209ENST00000546843 TSR2Q969E8 191 aaKnown RBP21.77■■□□□ 1.08
R3HDM2-209ENST00000546843 ZNF652Q9Y2D9 606 aa21.77■■□□□ 1.08
R3HDM2-209ENST00000546843 N4BP2Q86UW6 1770 aaPredicted RBP21.76■■□□□ 1.07
R3HDM2-209ENST00000546843 CHRNA5P30532 468 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms