RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 SPINK5Q9NQ38 1064 aaPredicted RBP27.04■■□□□ 1.92
SCARB1-211ENST00000546215 UBR3Q6ZT12 1888 aa27.03■■□□□ 1.92
SCARB1-211ENST00000546215 GNPATO15228 680 aa27.03■■□□□ 1.92
SCARB1-211ENST00000546215 KRT24Q2M2I5 525 aa27.03■■□□□ 1.92
SCARB1-211ENST00000546215 CCDC87Q9NVE4 849 aa27.03■■□□□ 1.92
SCARB1-211ENST00000546215 PNPLA7Q6ZV29 1317 aa27.02■■□□□ 1.92
SCARB1-211ENST00000546215 TSR2Q969E8 191 aaKnown RBP27.02■■□□□ 1.92
SCARB1-211ENST00000546215 QSER1Q2KHR3 1735 aa27.02■■□□□ 1.92
SCARB1-211ENST00000546215 SMIM5Q71RC9 77 aa27.01■■□□□ 1.92
SCARB1-211ENST00000546215 RPS6KA4O75676 772 aa27.01■■□□□ 1.91
SCARB1-211ENST00000546215 PDGFDQ9GZP0 370 aaPredicted RBP27.01■■□□□ 1.91
SCARB1-211ENST00000546215 ZBTB1Q9Y2K1 713 aa27.01■■□□□ 1.91
SCARB1-211ENST00000546215 RTCBQ9Y3I0 505 aaKnown RBP27■■□□□ 1.91
SCARB1-211ENST00000546215 SSFA2P28290 1259 aa26.99■■□□□ 1.91
SCARB1-211ENST00000546215 HNRNPUQ00839 825 aaKnown RBP eCLIP26.99■■□□□ 1.912e-6■□□□□ 11
SCARB1-211ENST00000546215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.98■■□□□ 1.91
SCARB1-211ENST00000546215 A1BGP04217 495 aa26.98■■□□□ 1.91
SCARB1-211ENST00000546215 LAMB4A4D0S4 1761 aa26.98■■□□□ 1.91
SCARB1-211ENST00000546215 FANCIQ9NVI1 1328 aa26.98■■□□□ 1.91
SCARB1-211ENST00000546215 GOLGA2Q08379 1002 aa26.97■■□□□ 1.91
SCARB1-211ENST00000546215 COL23A1Q86Y22 540 aaPredicted RBP26.97■■□□□ 1.91
SCARB1-211ENST00000546215 FLAD1Q8NFF5 587 aa26.97■■□□□ 1.91
SCARB1-211ENST00000546215 PHF14O94880 888 aa26.97■■□□□ 1.91
SCARB1-211ENST00000546215 CASZ1Q86V15 1759 aa26.96■■□□□ 1.91
SCARB1-211ENST00000546215 CANXP27824 592 aaKnown RBP26.96■■□□□ 1.91
SCARB1-211ENST00000546215 DUSP27Q5VZP5 1158 aa26.96■■□□□ 1.91
SCARB1-211ENST00000546215 C8orf58Q8NAV2 365 aa26.96■■□□□ 1.91
SCARB1-211ENST00000546215 SOS1Q07889 1333 aaPredicted RBP26.95■■□□□ 1.91
SCARB1-211ENST00000546215 HOXB7P09629 217 aa26.95■■□□□ 1.9
SCARB1-211ENST00000546215 MYH16Q9H6N6 1097 aa26.95■■□□□ 1.9
SCARB1-211ENST00000546215 ADRA2BP18089 450 aa26.94■■□□□ 1.9
SCARB1-211ENST00000546215 TRAPPC3LQ5T215 181 aa26.94■■□□□ 1.9
SCARB1-211ENST00000546215 ARHGEF1Q92888 912 aaKnown RBP26.93■■□□□ 1.9
SCARB1-211ENST00000546215 NBPF26B4DH59 902 aa26.92■■□□□ 1.9
SCARB1-211ENST00000546215 E9PSI1 815 aa26.92■■□□□ 1.9
SCARB1-211ENST00000546215 ELL2O00472 640 aaPredicted RBP26.92■■□□□ 1.9
SCARB1-211ENST00000546215 EIF2S2P20042 333 aaKnown RBP26.92■■□□□ 1.9
SCARB1-211ENST00000546215 PIP4K2AP48426 406 aaPredicted RBP26.92■■□□□ 1.9
SCARB1-211ENST00000546215 EIF5P55010 431 aaKnown RBP26.92■■□□□ 1.9
SCARB1-211ENST00000546215 SLFN5Q08AF3 891 aa26.92■■□□□ 1.9
SCARB1-211ENST00000546215 NBPF10Q6P3W6 841 aaKnown RBP26.92■■□□□ 1.9
SCARB1-211ENST00000546215 NBPF15Q8N660 670 aa26.92■■□□□ 1.9
SCARB1-211ENST00000546215 TSPYL6Q8N831 410 aa26.92■■□□□ 1.9
SCARB1-211ENST00000546215 CDCA7LQ96GN5 454 aa26.92■■□□□ 1.9
SCARB1-211ENST00000546215 SRCAPQ6ZRS2 3230 aa26.92■■□□□ 1.9
SCARB1-211ENST00000546215 IL6STP40189 918 aaPredicted RBP26.92■■□□□ 1.9
SCARB1-211ENST00000546215 MSH5O43196 834 aa26.91■■□□□ 1.9
SCARB1-211ENST00000546215 COL15A1P39059 1388 aa26.9■■□□□ 1.9
SCARB1-211ENST00000546215 SLC16A10Q8TF71 515 aa26.89■■□□□ 1.9
SCARB1-211ENST00000546215 ERBB4Q15303 1308 aa26.89■■□□□ 1.9
SCARB1-211ENST00000546215 EXOSC9Q06265 439 aaKnown RBP26.88■■□□□ 1.89
SCARB1-211ENST00000546215 HDGFL1Q5TGJ6 251 aa26.88■■□□□ 1.89
SCARB1-211ENST00000546215 TRMT2AQ8IZ69 625 aaKnown RBP26.88■■□□□ 1.89
SCARB1-211ENST00000546215 NECTIN2Q92692 538 aa26.88■■□□□ 1.89
SCARB1-211ENST00000546215 RFC4P35249 363 aa26.88■■□□□ 1.89
SCARB1-211ENST00000546215 PDIA6Q15084 440 aa26.88■■□□□ 1.89
SCARB1-211ENST00000546215 C4AP0C0L4 1744 aa26.87■■□□□ 1.89
SCARB1-211ENST00000546215 ZBTB7AO95365 584 aa26.87■■□□□ 1.89
SCARB1-211ENST00000546215 TWISTNBQ3B726 338 aaPredicted RBP26.87■■□□□ 1.89
SCARB1-211ENST00000546215 ZBED9Q6R2W3 1325 aa26.87■■□□□ 1.89
SCARB1-211ENST00000546215 ZNF330Q9Y3S2 320 aaPredicted RBP26.86■■□□□ 1.89
SCARB1-211ENST00000546215 MTFR1LQ9H019 292 aa26.85■■□□□ 1.89
SCARB1-211ENST00000546215 MYL6BP14649 208 aa26.84■■□□□ 1.89
SCARB1-211ENST00000546215 PROSER3Q2NL68 480 aa26.84■■□□□ 1.89
SCARB1-211ENST00000546215 LRP10Q7Z4F1 713 aa26.84■■□□□ 1.89
SCARB1-211ENST00000546215 A0A087WZG4 1122 aa26.84■■□□□ 1.89
SCARB1-211ENST00000546215 USP42Q9H9J4 1324 aaKnown RBP26.84■■□□□ 1.89
SCARB1-211ENST00000546215 SRP68Q9UHB9 627 aaKnown RBP26.84■■□□□ 1.89
SCARB1-211ENST00000546215 VAMP4O75379 141 aa26.83■■□□□ 1.89
SCARB1-211ENST00000546215 ANXA1P04083 346 aa26.83■■□□□ 1.89
SCARB1-211ENST00000546215 NPM2Q86SE8 214 aaKnown RBP26.83■■□□□ 1.89
SCARB1-211ENST00000546215 DDX21Q9NR30 783 aaKnown RBP eCLIP26.83■■□□□ 1.89
SCARB1-211ENST00000546215 CHPF2Q9P2E5 772 aa26.83■■□□□ 1.89
SCARB1-211ENST00000546215 NARFQ9UHQ1 456 aa26.83■■□□□ 1.89
SCARB1-211ENST00000546215 TBC1D2BQ9UPU7 963 aa26.82■■□□□ 1.88
SCARB1-211ENST00000546215 ATF5Q9Y2D1 282 aaPredicted RBP26.82■■□□□ 1.88
SCARB1-211ENST00000546215 GYS1P13807 737 aa26.81■■□□□ 1.88
SCARB1-211ENST00000546215 CHMP4AQ9BY43 222 aa26.81■■□□□ 1.88
SCARB1-211ENST00000546215 DBF4Q9UBU7 674 aaPredicted RBP26.81■■□□□ 1.88
SCARB1-211ENST00000546215 ZPR1O75312 459 aa26.8■■□□□ 1.88
SCARB1-211ENST00000546215 CCDC30Q5VVM6 783 aa26.8■■□□□ 1.88
SCARB1-211ENST00000546215 USPL1Q5W0Q7 1092 aa26.8■■□□□ 1.88
SCARB1-211ENST00000546215 MSL1Q68DK7 614 aa26.8■■□□□ 1.88
SCARB1-211ENST00000546215 DZIP3Q86Y13 1208 aaKnown RBP26.8■■□□□ 1.88
SCARB1-211ENST00000546215 SPON1Q9HCB6 807 aa26.8■■□□□ 1.88
SCARB1-211ENST00000546215 ARXQ96QS3 562 aa26.79■■□□□ 1.88
SCARB1-211ENST00000546215 COL24A1Q17RW2 1714 aa26.78■■□□□ 1.88
SCARB1-211ENST00000546215 BCL2L12Q9HB09 334 aa26.78■■□□□ 1.88
SCARB1-211ENST00000546215 CAMTA2O94983 1202 aa26.77■■□□□ 1.88
SCARB1-211ENST00000546215 PTGER2P43116 358 aa26.77■■□□□ 1.88
SCARB1-211ENST00000546215 TTLL7Q6ZT98 887 aa26.77■■□□□ 1.88
SCARB1-211ENST00000546215 SGIP1Q9BQI5 828 aa26.77■■□□□ 1.88
SCARB1-211ENST00000546215 FKBP8Q14318 412 aa26.76■■□□□ 1.87
SCARB1-211ENST00000546215 NLGN1Q8N2Q7 840 aa26.76■■□□□ 1.87
SCARB1-211ENST00000546215 HYPKQ9NX55 129 aa26.75■■□□□ 1.87
SCARB1-211ENST00000546215 TCERG1O14776 1098 aaKnown RBP26.75■■□□□ 1.87
SCARB1-211ENST00000546215 COPS6Q7L5N1 327 aa26.75■■□□□ 1.87
SCARB1-211ENST00000546215 XAGE3Q8WTP9 111 aa26.74■■□□□ 1.87
SCARB1-211ENST00000546215 SCN7AQ01118 1682 aa26.74■■□□□ 1.87
SCARB1-211ENST00000546215 BCORQ6W2J9 1755 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms