RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 HSP90AB3PQ58FF7 597 aa11.74□□□□□ -0.53
TRAF1-203ENST00000546084 CKAP2LQ8IYA6 745 aa11.74□□□□□ -0.53
TRAF1-203ENST00000546084 IL17REQ8NFR9 667 aa11.74□□□□□ -0.53
TRAF1-203ENST00000546084 RHPN1Q8TCX5 695 aa11.74□□□□□ -0.53
TRAF1-203ENST00000546084 LMBRD1Q9NUN5 540 aa11.74□□□□□ -0.53
TRAF1-203ENST00000546084 OFD1O75665 1012 aa11.74□□□□□ -0.53
TRAF1-203ENST00000546084 ZBTB3Q9H5J0 574 aa11.74□□□□□ -0.53
TRAF1-203ENST00000546084 USP25Q9UHP3 1055 aa11.74□□□□□ -0.53
TRAF1-203ENST00000546084 NBPF6Q5VWK0 638 aa11.74□□□□□ -0.53
TRAF1-203ENST00000546084 UBE3BQ7Z3V4 1068 aa11.74□□□□□ -0.53
TRAF1-203ENST00000546084 NBPF4Q96M43 638 aa11.74□□□□□ -0.53
TRAF1-203ENST00000546084 CHST3Q7LGC8 479 aa11.73□□□□□ -0.53
TRAF1-203ENST00000546084 CNPY2Q9Y2B0 182 aa11.73□□□□□ -0.53
TRAF1-203ENST00000546084 PPP1R9BQ96SB3 815 aa11.73□□□□□ -0.53
TRAF1-203ENST00000546084 TET3O43151 1660 aa11.73□□□□□ -0.53
TRAF1-203ENST00000546084 C17orf53Q8N3J3 647 aaPredicted RBP11.73□□□□□ -0.53
TRAF1-203ENST00000546084 ZBTB9Q96C00 473 aa11.73□□□□□ -0.53
TRAF1-203ENST00000546084 PUS7Q96PZ0 661 aaKnown RBP11.73□□□□□ -0.53
TRAF1-203ENST00000546084 ESYT1Q9BSJ8 1104 aa11.73□□□□□ -0.53
TRAF1-203ENST00000546084 MTMR7Q9Y216 660 aa11.73□□□□□ -0.53
TRAF1-203ENST00000546084 DDX58O95786 925 aaKnown RBP11.72□□□□□ -0.53
TRAF1-203ENST00000546084 ATF3P18847 181 aa11.72□□□□□ -0.53
TRAF1-203ENST00000546084 LARP1BQ659C4 914 aaKnown RBP11.72□□□□□ -0.53
TRAF1-203ENST00000546084 GIMAP6Q6P9H5 292 aa11.72□□□□□ -0.53
TRAF1-203ENST00000546084 TNRQ92752 1358 aa11.72□□□□□ -0.53
TRAF1-203ENST00000546084 SHROOM2Q13796 1616 aa11.72□□□□□ -0.53
TRAF1-203ENST00000546084 SF3A1Q15459 793 aaKnown RBP11.72□□□□□ -0.53
TRAF1-203ENST00000546084 DDX46Q7L014 1031 aaKnown RBP11.72□□□□□ -0.53
TRAF1-203ENST00000546084 NFATC2IPQ8NCF5 419 aa11.72□□□□□ -0.53
TRAF1-203ENST00000546084 RUFY2Q8WXA3 655 aa11.72□□□□□ -0.53
TRAF1-203ENST00000546084 UHRF1BP1LA0JNW5 1464 aa11.72□□□□□ -0.53
TRAF1-203ENST00000546084 HCLS1P14317 486 aaPredicted RBP11.72□□□□□ -0.53
TRAF1-203ENST00000546084 HOXC9P31274 260 aa11.72□□□□□ -0.53
TRAF1-203ENST00000546084 PDRG1Q9NUG6 133 aa11.72□□□□□ -0.53
TRAF1-203ENST00000546084 VIRMAQ69YN4 1812 aaKnown RBP11.71□□□□□ -0.53
TRAF1-203ENST00000546084 CCT2P78371 535 aaKnown RBP11.71□□□□□ -0.53
TRAF1-203ENST00000546084 PROSER3Q2NL68 480 aa11.71□□□□□ -0.53
TRAF1-203ENST00000546084 RAB11FIP3O75154 756 aa11.71□□□□□ -0.53
TRAF1-203ENST00000546084 GADD45BO75293 160 aaPredicted RBP11.71□□□□□ -0.53
TRAF1-203ENST00000546084 TOM1L2Q6ZVM7 507 aa11.71□□□□□ -0.53
TRAF1-203ENST00000546084 TMEM63CQ9P1W3 806 aa11.71□□□□□ -0.53
TRAF1-203ENST00000546084 NSFL1CQ9UNZ2 370 aaKnown RBP11.71□□□□□ -0.53
TRAF1-203ENST00000546084 NCOA3Q9Y6Q9 1424 aa11.71□□□□□ -0.54
TRAF1-203ENST00000546084 ZNF445P59923 1031 aa11.71□□□□□ -0.54
TRAF1-203ENST00000546084 HAND2P61296 217 aa11.71□□□□□ -0.54
TRAF1-203ENST00000546084 ANKLE2Q86XL3 938 aa11.71□□□□□ -0.54
TRAF1-203ENST00000546084 PLCD3Q8N3E9 789 aa11.71□□□□□ -0.54
TRAF1-203ENST00000546084 GPT2Q8TD30 523 aa11.71□□□□□ -0.54
TRAF1-203ENST00000546084 CCDC39Q9UFE4 941 aa11.71□□□□□ -0.54
TRAF1-203ENST00000546084 COPS6Q7L5N1 327 aa11.7□□□□□ -0.54
TRAF1-203ENST00000546084 CCDC82Q8N4S0 544 aa11.7□□□□□ -0.54
TRAF1-203ENST00000546084 ANKRD24Q8TF21 1146 aa11.7□□□□□ -0.54
TRAF1-203ENST00000546084 KIF1BPQ96EK5 621 aa11.7□□□□□ -0.54
TRAF1-203ENST00000546084 CYP46A1Q9Y6A2 500 aa11.7□□□□□ -0.54
TRAF1-203ENST00000546084 KIF1BO60333 1816 aa11.7□□□□□ -0.54
TRAF1-203ENST00000546084 MBD3O95983 291 aa11.7□□□□□ -0.54
TRAF1-203ENST00000546084 CHMLP26374 656 aa11.7□□□□□ -0.54
TRAF1-203ENST00000546084 ROBO2Q9HCK4 1378 aa11.7□□□□□ -0.54
TRAF1-203ENST00000546084 ABCC4O15439 1325 aa11.7□□□□□ -0.54
TRAF1-203ENST00000546084 TSPOAP1O95153 1857 aa11.7□□□□□ -0.54
TRAF1-203ENST00000546084 GPTP24298 496 aa11.7□□□□□ -0.54
TRAF1-203ENST00000546084 CSPP1Q1MSJ5 1256 aa11.7□□□□□ -0.54
TRAF1-203ENST00000546084 TSPY26PQ9H489 355 aa11.7□□□□□ -0.54
TRAF1-203ENST00000546084 CABP4P57796 275 aa11.69□□□□□ -0.54
TRAF1-203ENST00000546084 LRSAM1Q6UWE0 723 aa11.69□□□□□ -0.54
TRAF1-203ENST00000546084 CCDC129Q6ZRS4 1044 aa11.69□□□□□ -0.54
TRAF1-203ENST00000546084 USP44Q9H0E7 712 aa11.69□□□□□ -0.54
TRAF1-203ENST00000546084 PTPRCP08575 1304 aa11.69□□□□□ -0.54
TRAF1-203ENST00000546084 HSPA2P54652 639 aa11.69□□□□□ -0.54
TRAF1-203ENST00000546084 ATP8B2P98198 1209 aa11.69□□□□□ -0.54
TRAF1-203ENST00000546084 FAM227BQ96M60 508 aa11.69□□□□□ -0.54
TRAF1-203ENST00000546084 NOL7Q9UMY1 257 aaKnown RBP11.69□□□□□ -0.54
TRAF1-203ENST00000546084 USP48Q86UV5 1035 aa11.69□□□□□ -0.54
TRAF1-203ENST00000546084 XAGE3Q8WTP9 111 aa11.69□□□□□ -0.54
TRAF1-203ENST00000546084 TSC1Q92574 1164 aa11.69□□□□□ -0.54
TRAF1-203ENST00000546084 ZKSCAN5Q9Y2L8 839 aa11.69□□□□□ -0.54
TRAF1-203ENST00000546084 SHPRHQ149N8 1683 aa11.68□□□□□ -0.54
TRAF1-203ENST00000546084 A0A087WZG4 1122 aa11.68□□□□□ -0.54
TRAF1-203ENST00000546084 DNM1Q05193 864 aaKnown RBP11.68□□□□□ -0.54
TRAF1-203ENST00000546084 TTC12Q9H892 705 aaPredicted RBP11.68□□□□□ -0.54
TRAF1-203ENST00000546084 SOS1Q07889 1333 aaPredicted RBP11.68□□□□□ -0.54
TRAF1-203ENST00000546084 ISM2Q6H9L7 571 aa11.68□□□□□ -0.54
TRAF1-203ENST00000546084 GJB2P29033 226 aa11.68□□□□□ -0.54
TRAF1-203ENST00000546084 AK2P54819 239 aa11.68□□□□□ -0.54
TRAF1-203ENST00000546084 RRP12Q5JTH9 1297 aaKnown RBP11.68□□□□□ -0.54
TRAF1-203ENST00000546084 PRDM11Q9NQV5 511 aa11.68□□□□□ -0.54
TRAF1-203ENST00000546084 RTL1A6NKG5 1358 aa11.67□□□□□ -0.54
TRAF1-203ENST00000546084 SLFNL1Q499Z3 407 aa11.67□□□□□ -0.54
TRAF1-203ENST00000546084 BLOC1S2Q6QNY1 142 aa11.67□□□□□ -0.54
TRAF1-203ENST00000546084 TATP17735 454 aaPredicted RBP11.67□□□□□ -0.54
TRAF1-203ENST00000546084 BECN2A8MW95 431 aa11.67□□□□□ -0.54
TRAF1-203ENST00000546084 PHF14O94880 888 aa11.67□□□□□ -0.54
TRAF1-203ENST00000546084 KRT28Q7Z3Y7 464 aa11.67□□□□□ -0.54
TRAF1-203ENST00000546084 PIBF1Q8WXW3 757 aa11.67□□□□□ -0.54
TRAF1-203ENST00000546084 PRDM10Q9NQV6 1147 aa11.67□□□□□ -0.54
TRAF1-203ENST00000546084 EFCAB6Q5THR3 1501 aa11.66□□□□□ -0.54
TRAF1-203ENST00000546084 GCP02774 474 aa11.66□□□□□ -0.54
TRAF1-203ENST00000546084 ERCC4Q92889 916 aaPredicted RBP11.66□□□□□ -0.54
TRAF1-203ENST00000546084 TRIM5Q9C035 493 aa11.66□□□□□ -0.54
TRAF1-203ENST00000546084 DBF4Q9UBU7 674 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms