RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 UBR2Q8IWV8 1755 aa17.9■□□□□ 0.46
LTBR-213ENST00000544454 NGEFQ8N5V2 710 aa17.9■□□□□ 0.46
LTBR-213ENST00000544454 CFAP44Q96MT7 982 aa17.9■□□□□ 0.46
LTBR-213ENST00000544454 USP16Q9Y5T5 823 aa17.9■□□□□ 0.46
LTBR-213ENST00000544454 QSER1Q2KHR3 1735 aa17.89■□□□□ 0.46
LTBR-213ENST00000544454 GIGYF1O75420 1035 aaPredicted RBP17.89■□□□□ 0.45
LTBR-213ENST00000544454 RFC4P35249 363 aa17.89■□□□□ 0.45
LTBR-213ENST00000544454 PTGER2P43116 358 aa17.89■□□□□ 0.45
LTBR-213ENST00000544454 MIER1Q8N108 512 aa17.89■□□□□ 0.45
LTBR-213ENST00000544454 LAS1LQ9Y4W2 734 aaKnown RBP17.89■□□□□ 0.45
LTBR-213ENST00000544454 ZNF853P0CG23 659 aa17.88■□□□□ 0.45
LTBR-213ENST00000544454 WWC1Q8IX03 1113 aa17.88■□□□□ 0.45
LTBR-213ENST00000544454 SGIP1Q9BQI5 828 aa17.88■□□□□ 0.45
LTBR-213ENST00000544454 IFT57Q9NWB7 429 aa17.88■□□□□ 0.45
LTBR-213ENST00000544454 ZBTB1Q9Y2K1 713 aa17.88■□□□□ 0.45
LTBR-213ENST00000544454 TJP1Q07157 1748 aa17.88■□□□□ 0.45
LTBR-213ENST00000544454 SOS1Q07889 1333 aaPredicted RBP17.88■□□□□ 0.45
LTBR-213ENST00000544454 COL5A3P25940 1745 aaPredicted RBP17.87■□□□□ 0.45
LTBR-213ENST00000544454 PRAMEF22A3QJZ6 481 aa17.87■□□□□ 0.45
LTBR-213ENST00000544454 A1BGP04217 495 aa17.87■□□□□ 0.45
LTBR-213ENST00000544454 CANXP27824 592 aaKnown RBP17.87■□□□□ 0.45
LTBR-213ENST00000544454 POLD1P28340 1107 aa17.86■□□□□ 0.45
LTBR-213ENST00000544454 IL6STP40189 918 aaPredicted RBP17.86■□□□□ 0.45
LTBR-213ENST00000544454 EIF5P55010 431 aaKnown RBP17.86■□□□□ 0.45
LTBR-213ENST00000544454 GNAI1P63096 354 aa17.86■□□□□ 0.45
LTBR-213ENST00000544454 A0A087WZG4 1122 aa17.85■□□□□ 0.45
LTBR-213ENST00000544454 LRP5O75197 1615 aa17.85■□□□□ 0.45
LTBR-213ENST00000544454 NLGN1Q8N2Q7 840 aa17.85■□□□□ 0.45
LTBR-213ENST00000544454 PPP1R1BQ9UD71 204 aaPredicted RBP17.85■□□□□ 0.45
LTBR-213ENST00000544454 UBR3Q6ZT12 1888 aa17.84■□□□□ 0.45
LTBR-213ENST00000544454 IL16Q14005 1332 aa17.84■□□□□ 0.45
LTBR-213ENST00000544454 SENP3-EIF4A1A0A087X0R7 540 aa17.84■□□□□ 0.45
LTBR-213ENST00000544454 ARXQ96QS3 562 aa17.84■□□□□ 0.45
LTBR-213ENST00000544454 TUBGCP6Q96RT7 1819 aa17.84■□□□□ 0.45
LTBR-213ENST00000544454 MYH14Q7Z406 1995 aaKnown RBP17.83■□□□□ 0.44
LTBR-213ENST00000544454 ZPR1O75312 459 aa17.83■□□□□ 0.44
LTBR-213ENST00000544454 GYS1P13807 737 aa17.83■□□□□ 0.44
LTBR-213ENST00000544454 MSL1Q68DK7 614 aa17.83■□□□□ 0.44
LTBR-213ENST00000544454 NPM2Q86SE8 214 aaKnown RBP17.83■□□□□ 0.44
LTBR-213ENST00000544454 WDR63Q8IWG1 891 aa17.83■□□□□ 0.44
LTBR-213ENST00000544454 MBIPQ9NS73 344 aa17.83■□□□□ 0.44
LTBR-213ENST00000544454 SALL2Q9Y467 1007 aaPredicted RBP17.83■□□□□ 0.44
LTBR-213ENST00000544454 KDM3BQ7LBC6 1761 aa17.82■□□□□ 0.44
LTBR-213ENST00000544454 USP42Q9H9J4 1324 aaKnown RBP17.82■□□□□ 0.44
LTBR-213ENST00000544454 NARFQ9UHQ1 456 aa17.82■□□□□ 0.44
LTBR-213ENST00000544454 COL15A1P39059 1388 aa17.81■□□□□ 0.44
LTBR-213ENST00000544454 NBPF26B4DH59 902 aa17.81■□□□□ 0.44
LTBR-213ENST00000544454 NBPF10Q6P3W6 841 aaKnown RBP17.81■□□□□ 0.44
LTBR-213ENST00000544454 NBPF15Q8N660 670 aa17.81■□□□□ 0.44
LTBR-213ENST00000544454 SRP68Q9UHB9 627 aaKnown RBP17.81■□□□□ 0.44
LTBR-213ENST00000544454 HOXB7P09629 217 aa17.8■□□□□ 0.44
LTBR-213ENST00000544454 ERBB4Q15303 1308 aa17.79■□□□□ 0.44
LTBR-213ENST00000544454 USPL1Q5W0Q7 1092 aa17.79■□□□□ 0.44
LTBR-213ENST00000544454 ZNF330Q9Y3S2 320 aaPredicted RBP17.79■□□□□ 0.44
LTBR-213ENST00000544454 EIF2S2P20042 333 aaKnown RBP17.78■□□□□ 0.44
LTBR-213ENST00000544454 PIP4K2AP48426 406 aaPredicted RBP17.78■□□□□ 0.44
LTBR-213ENST00000544454 FKBP8Q14318 412 aa17.78■□□□□ 0.44
LTBR-213ENST00000544454 KRT24Q2M2I5 525 aa17.78■□□□□ 0.44
LTBR-213ENST00000544454 MMP10P09238 476 aa17.77■□□□□ 0.44
LTBR-213ENST00000544454 DUSP27Q5VZP5 1158 aa17.77■□□□□ 0.44
LTBR-213ENST00000544454 TBC1D2BQ9UPU7 963 aa17.77■□□□□ 0.44
LTBR-213ENST00000544454 TM4SF1P30408 202 aa17.76■□□□□ 0.43
LTBR-213ENST00000544454 DZIP3Q86Y13 1208 aaKnown RBP17.76■□□□□ 0.43
LTBR-213ENST00000544454 CHMP4AQ9BY43 222 aa17.76■□□□□ 0.43
LTBR-213ENST00000544454 BCL2L12Q9HB09 334 aa17.76■□□□□ 0.43
LTBR-213ENST00000544454 COL24A1Q17RW2 1714 aa17.75■□□□□ 0.43
LTBR-213ENST00000544454 ZNF521Q96K83 1311 aa17.75■□□□□ 0.43
LTBR-213ENST00000544454 RGL2O15211 777 aa17.75■□□□□ 0.43
LTBR-213ENST00000544454 CAMTA2O94983 1202 aa17.75■□□□□ 0.43
LTBR-213ENST00000544454 PDIA6Q15084 440 aa17.75■□□□□ 0.43
LTBR-213ENST00000544454 TSR2Q969E8 191 aaKnown RBP17.75■□□□□ 0.43
LTBR-213ENST00000544454 FHDC1Q9C0D6 1143 aaPredicted RBP17.75■□□□□ 0.43
LTBR-213ENST00000544454 MYL6BP14649 208 aa17.74■□□□□ 0.43
LTBR-213ENST00000544454 HDGFL1Q5TGJ6 251 aa17.74■□□□□ 0.43
LTBR-213ENST00000544454 CLEC4GQ6UXB4 293 aa17.74■□□□□ 0.43
LTBR-213ENST00000544454 C8orf58Q8NAV2 365 aa17.74■□□□□ 0.43
LTBR-213ENST00000544454 SYT17Q9BSW7 474 aa17.74■□□□□ 0.43
LTBR-213ENST00000544454 PARP3Q9Y6F1 533 aa17.74■□□□□ 0.43
LTBR-213ENST00000544454 GOLGA2Q08379 1002 aa17.73■□□□□ 0.43
LTBR-213ENST00000544454 NECTIN2Q92692 538 aa17.73■□□□□ 0.43
LTBR-213ENST00000544454 MYH16Q9H6N6 1097 aa17.73■□□□□ 0.43
LTBR-213ENST00000544454 DDX21Q9NR30 783 aaKnown RBP eCLIP17.73■□□□□ 0.43
LTBR-213ENST00000544454 CD2APQ9Y5K6 639 aa17.73■□□□□ 0.43
LTBR-213ENST00000544454 ERVV-1B6SEH8 477 aa17.72■□□□□ 0.43
LTBR-213ENST00000544454 ELL2O00472 640 aaPredicted RBP17.72■□□□□ 0.43
LTBR-213ENST00000544454 NFIXQ14938 502 aa17.72■□□□□ 0.43
LTBR-213ENST00000544454 LRP10Q7Z4F1 713 aa17.72■□□□□ 0.43
LTBR-213ENST00000544454 DBF4Q9UBU7 674 aaPredicted RBP17.72■□□□□ 0.43
LTBR-213ENST00000544454 ZNF652Q9Y2D9 606 aa17.72■□□□□ 0.43
LTBR-213ENST00000544454 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
LTBR-213ENST00000544454 FANCIQ9NVI1 1328 aa17.71■□□□□ 0.42
LTBR-213ENST00000544454 C4AP0C0L4 1744 aa17.7■□□□□ 0.42
LTBR-213ENST00000544454 POLRMTO00411 1230 aaKnown RBP17.7■□□□□ 0.42
LTBR-213ENST00000544454 DDR1Q08345 913 aa17.7■□□□□ 0.42
LTBR-213ENST00000544454 PROSER3Q2NL68 480 aa17.7■□□□□ 0.42
LTBR-213ENST00000544454 KIF6Q6ZMV9 814 aa17.7■□□□□ 0.42
LTBR-213ENST00000544454 TSPYL6Q8N831 410 aa17.7■□□□□ 0.42
LTBR-213ENST00000544454 CHPF2Q9P2E5 772 aa17.7■□□□□ 0.42
LTBR-213ENST00000544454 LAMB4A4D0S4 1761 aa17.7■□□□□ 0.42
LTBR-213ENST00000544454 CCDC30Q5VVM6 783 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms