RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 SNRPA1P09661 255 aaKnown RBP24.07■■□□□ 1.44
COPS7A-216ENST00000543170 CALD1Q05682 793 aaKnown RBP24.07■■□□□ 1.44
COPS7A-216ENST00000543170 MIS18AQ9NYP9 233 aa24.07■■□□□ 1.44
COPS7A-216ENST00000543170 TSPYL4Q9UJ04 414 aa24.07■■□□□ 1.44
COPS7A-216ENST00000543170 EIF4A1P60842 406 aaKnown RBP24.06■■□□□ 1.44
COPS7A-216ENST00000543170 FAM9BQ8IZU0 186 aa24.06■■□□□ 1.44
COPS7A-216ENST00000543170 SGIP1Q9BQI5 828 aa24.05■■□□□ 1.44
COPS7A-216ENST00000543170 SOS1Q07889 1333 aaPredicted RBP24.05■■□□□ 1.44
COPS7A-216ENST00000543170 CHL1O00533 1208 aa24.04■■□□□ 1.44
COPS7A-216ENST00000543170 MSH5O43196 834 aa24.04■■□□□ 1.44
COPS7A-216ENST00000543170 PTGER2P43116 358 aa24.04■■□□□ 1.44
COPS7A-216ENST00000543170 TRAPPC3LQ5T215 181 aa24.04■■□□□ 1.44
COPS7A-216ENST00000543170 ZBTB1Q9Y2K1 713 aa24.04■■□□□ 1.44
COPS7A-216ENST00000543170 NGEFQ8N5V2 710 aa24.03■■□□□ 1.44
COPS7A-216ENST00000543170 CFAP44Q96MT7 982 aa24.03■■□□□ 1.44
COPS7A-216ENST00000543170 ATF5Q9Y2D1 282 aaPredicted RBP24.02■■□□□ 1.44
COPS7A-216ENST00000543170 COL15A1P39059 1388 aa24.02■■□□□ 1.44
COPS7A-216ENST00000543170 GIGYF1O75420 1035 aaPredicted RBP24.01■■□□□ 1.43
COPS7A-216ENST00000543170 SMIM5Q71RC9 77 aa24.01■■□□□ 1.43
COPS7A-216ENST00000543170 ARHGEF1Q92888 912 aaKnown RBP24.01■■□□□ 1.43
COPS7A-216ENST00000543170 IFT57Q9NWB7 429 aa24.01■■□□□ 1.43
COPS7A-216ENST00000543170 USP16Q9Y5T5 823 aa24.01■■□□□ 1.43
COPS7A-216ENST00000543170 ZNF853P0CG23 659 aa24■■□□□ 1.43
COPS7A-216ENST00000543170 PRAMEF22A3QJZ6 481 aa23.99■■□□□ 1.43
COPS7A-216ENST00000543170 RFC4P35249 363 aa23.99■■□□□ 1.43
COPS7A-216ENST00000543170 WWC1Q8IX03 1113 aa23.99■■□□□ 1.43
COPS7A-216ENST00000543170 SCN7AQ01118 1682 aa23.99■■□□□ 1.43
COPS7A-216ENST00000543170 POLD1P28340 1107 aa23.98■■□□□ 1.43
COPS7A-216ENST00000543170 IL6STP40189 918 aaPredicted RBP23.98■■□□□ 1.43
COPS7A-216ENST00000543170 EIF5P55010 431 aaKnown RBP23.98■■□□□ 1.43
COPS7A-216ENST00000543170 GNAI1P63096 354 aa23.98■■□□□ 1.43
COPS7A-216ENST00000543170 USP42Q9H9J4 1324 aaKnown RBP23.98■■□□□ 1.43
COPS7A-216ENST00000543170 IL16Q14005 1332 aa23.97■■□□□ 1.43
COPS7A-216ENST00000543170 CANXP27824 592 aaKnown RBP23.96■■□□□ 1.43
COPS7A-216ENST00000543170 MIER1Q8N108 512 aa23.96■■□□□ 1.43
COPS7A-216ENST00000543170 LAS1LQ9Y4W2 734 aaKnown RBP23.96■■□□□ 1.43
COPS7A-216ENST00000543170 BCORQ6W2J9 1755 aa23.96■■□□□ 1.43
COPS7A-216ENST00000543170 ERBB4Q15303 1308 aa23.95■■□□□ 1.42
COPS7A-216ENST00000543170 A0A087WZG4 1122 aa23.95■■□□□ 1.42
COPS7A-216ENST00000543170 A1BGP04217 495 aa23.95■■□□□ 1.42
COPS7A-216ENST00000543170 MBIPQ9NS73 344 aa23.95■■□□□ 1.42
COPS7A-216ENST00000543170 PPP1R1BQ9UD71 204 aaPredicted RBP23.95■■□□□ 1.42
COPS7A-216ENST00000543170 HOXB7P09629 217 aa23.94■■□□□ 1.42
COPS7A-216ENST00000543170 GYS1P13807 737 aa23.94■■□□□ 1.42
COPS7A-216ENST00000543170 MSL1Q68DK7 614 aa23.94■■□□□ 1.42
COPS7A-216ENST00000543170 NLGN1Q8N2Q7 840 aa23.93■■□□□ 1.42
COPS7A-216ENST00000543170 ARXQ96QS3 562 aa23.93■■□□□ 1.42
COPS7A-216ENST00000543170 NARFQ9UHQ1 456 aa23.93■■□□□ 1.42
COPS7A-216ENST00000543170 WDR63Q8IWG1 891 aa23.92■■□□□ 1.42
COPS7A-216ENST00000543170 ZPR1O75312 459 aa23.91■■□□□ 1.42
COPS7A-216ENST00000543170 NBPF26B4DH59 902 aa23.9■■□□□ 1.42
COPS7A-216ENST00000543170 NBPF10Q6P3W6 841 aaKnown RBP23.9■■□□□ 1.42
COPS7A-216ENST00000543170 NPM2Q86SE8 214 aaKnown RBP23.9■■□□□ 1.42
COPS7A-216ENST00000543170 NBPF15Q8N660 670 aa23.9■■□□□ 1.42
COPS7A-216ENST00000543170 SRP68Q9UHB9 627 aaKnown RBP23.9■■□□□ 1.42
COPS7A-216ENST00000543170 SENP3-EIF4A1A0A087X0R7 540 aa23.89■■□□□ 1.41
COPS7A-216ENST00000543170 USPL1Q5W0Q7 1092 aa23.89■■□□□ 1.41
COPS7A-216ENST00000543170 ZNF521Q96K83 1311 aa23.88■■□□□ 1.41
COPS7A-216ENST00000543170 RGL2O15211 777 aa23.88■■□□□ 1.41
COPS7A-216ENST00000543170 KRT24Q2M2I5 525 aa23.87■■□□□ 1.41
COPS7A-216ENST00000543170 ZNF330Q9Y3S2 320 aaPredicted RBP23.87■■□□□ 1.41
COPS7A-216ENST00000543170 MMP10P09238 476 aa23.86■■□□□ 1.41
COPS7A-216ENST00000543170 PIP4K2AP48426 406 aaPredicted RBP23.86■■□□□ 1.41
COPS7A-216ENST00000543170 FKBP8Q14318 412 aa23.86■■□□□ 1.41
COPS7A-216ENST00000543170 SALL2Q9Y467 1007 aaPredicted RBP23.86■■□□□ 1.41
COPS7A-216ENST00000543170 KIF13BQ9NQT8 1826 aa23.86■■□□□ 1.41
COPS7A-216ENST00000543170 DZIP3Q86Y13 1208 aaKnown RBP23.85■■□□□ 1.41
COPS7A-216ENST00000543170 BCL2L12Q9HB09 334 aa23.85■■□□□ 1.41
COPS7A-216ENST00000543170 CAMTA2O94983 1202 aa23.84■■□□□ 1.41
COPS7A-216ENST00000543170 DUSP27Q5VZP5 1158 aa23.84■■□□□ 1.41
COPS7A-216ENST00000543170 FHDC1Q9C0D6 1143 aaPredicted RBP23.84■■□□□ 1.41
COPS7A-216ENST00000543170 NRXN2Q9P2S2 1712 aa23.84■■□□□ 1.41
COPS7A-216ENST00000543170 EIF2S2P20042 333 aaKnown RBP23.83■■□□□ 1.41
COPS7A-216ENST00000543170 TSR2Q969E8 191 aaKnown RBP23.83■■□□□ 1.41
COPS7A-216ENST00000543170 TBC1D2BQ9UPU7 963 aa23.83■■□□□ 1.41
COPS7A-216ENST00000543170 FANCIQ9NVI1 1328 aa23.83■■□□□ 1.4
COPS7A-216ENST00000543170 TM4SF1P30408 202 aa23.82■■□□□ 1.4
COPS7A-216ENST00000543170 PDIA6Q15084 440 aa23.82■■□□□ 1.4
COPS7A-216ENST00000543170 HDGFL1Q5TGJ6 251 aa23.82■■□□□ 1.4
COPS7A-216ENST00000543170 LRP10Q7Z4F1 713 aa23.82■■□□□ 1.4
COPS7A-216ENST00000543170 CHMP4AQ9BY43 222 aa23.82■■□□□ 1.4
COPS7A-216ENST00000543170 CLEC4GQ6UXB4 293 aa23.81■■□□□ 1.4
COPS7A-216ENST00000543170 SYT17Q9BSW7 474 aa23.81■■□□□ 1.4
COPS7A-216ENST00000543170 DDX21Q9NR30 783 aaKnown RBP eCLIP23.81■■□□□ 1.4
COPS7A-216ENST00000543170 PARP3Q9Y6F1 533 aa23.81■■□□□ 1.4
COPS7A-216ENST00000543170 C10orf71Q711Q0 1435 aa23.81■■□□□ 1.4
COPS7A-216ENST00000543170 AFDNP55196 1824 aaKnown RBP23.8■■□□□ 1.4
COPS7A-216ENST00000543170 ZNF652Q9Y2D9 606 aa23.8■■□□□ 1.4
COPS7A-216ENST00000543170 CD2APQ9Y5K6 639 aa23.8■■□□□ 1.4
COPS7A-216ENST00000543170 POLRMTO00411 1230 aaKnown RBP23.79■■□□□ 1.4
COPS7A-216ENST00000543170 MYL6BP14649 208 aa23.79■■□□□ 1.4
COPS7A-216ENST00000543170 DDR1Q08345 913 aa23.79■■□□□ 1.4
COPS7A-216ENST00000543170 NFIXQ14938 502 aa23.79■■□□□ 1.4
COPS7A-216ENST00000543170 C8orf58Q8NAV2 365 aa23.79■■□□□ 1.4
COPS7A-216ENST00000543170 MYH16Q9H6N6 1097 aa23.79■■□□□ 1.4
COPS7A-216ENST00000543170 NUP98P52948 1817 aa23.78■■□□□ 1.4
COPS7A-216ENST00000543170 ERVV-1B6SEH8 477 aa23.78■■□□□ 1.4
COPS7A-216ENST00000543170 DBF4Q9UBU7 674 aaPredicted RBP23.78■■□□□ 1.4
COPS7A-216ENST00000543170 MAP3K15Q6ZN16 1313 aa23.78■■□□□ 1.4
COPS7A-216ENST00000543170 PROSER3Q2NL68 480 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms