RNA–Protein interactions for RNA: ENST00000542671.5

CDKL1-211, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 5

Gene CDKL1, Length 487 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-211ENST00000542671 CCDC87Q9NVE4 849 aa18.56■□□□□ 0.56
CDKL1-211ENST00000542671 USP16Q9Y5T5 823 aa18.56■□□□□ 0.56
CDKL1-211ENST00000542671 SOS1Q07889 1333 aaPredicted RBP18.55■□□□□ 0.56
CDKL1-211ENST00000542671 RPS6KA4O75676 772 aa18.55■□□□□ 0.56
CDKL1-211ENST00000542671 MYH16Q9H6N6 1097 aa18.55■□□□□ 0.56
CDKL1-211ENST00000542671 TFCP2L1Q9NZI6 479 aa18.55■□□□□ 0.56
CDKL1-211ENST00000542671 PRAMEF22A3QJZ6 481 aa18.54■□□□□ 0.56
CDKL1-211ENST00000542671 SSFA2P28290 1259 aa18.54■□□□□ 0.56
CDKL1-211ENST00000542671 HNRNPUQ00839 825 aaKnown RBP eCLIP18.54■□□□□ 0.56
CDKL1-211ENST00000542671 R3HDM1Q15032 1099 aaKnown RBP18.54■□□□□ 0.56
CDKL1-211ENST00000542671 SPINK5Q9NQ38 1064 aaPredicted RBP18.54■□□□□ 0.56
CDKL1-211ENST00000542671 CASZ1Q86V15 1759 aa18.53■□□□□ 0.56
CDKL1-211ENST00000542671 E9PSI1 815 aa18.53■□□□□ 0.56
CDKL1-211ENST00000542671 GNPATO15228 680 aa18.53■□□□□ 0.56
CDKL1-211ENST00000542671 ADRA2BP18089 450 aa18.53■□□□□ 0.56
CDKL1-211ENST00000542671 RTCBQ9Y3I0 505 aaKnown RBP18.53■□□□□ 0.56
CDKL1-211ENST00000542671 PNPLA7Q6ZV29 1317 aa18.52■□□□□ 0.56
CDKL1-211ENST00000542671 FANCIQ9NVI1 1328 aa18.52■□□□□ 0.56
CDKL1-211ENST00000542671 SLFN5Q08AF3 891 aa18.52■□□□□ 0.56
CDKL1-211ENST00000542671 TSR2Q969E8 191 aaKnown RBP18.52■□□□□ 0.56
CDKL1-211ENST00000542671 ERBB4Q15303 1308 aa18.51■□□□□ 0.55
CDKL1-211ENST00000542671 KRT24Q2M2I5 525 aa18.51■□□□□ 0.55
CDKL1-211ENST00000542671 DUSP27Q5VZP5 1158 aa18.51■□□□□ 0.55
CDKL1-211ENST00000542671 TRMT2AQ8IZ69 625 aaKnown RBP18.51■□□□□ 0.55
CDKL1-211ENST00000542671 CHMP4AQ9BY43 222 aa18.51■□□□□ 0.55
CDKL1-211ENST00000542671 ZBTB1Q9Y2K1 713 aa18.51■□□□□ 0.55
CDKL1-211ENST00000542671 ZBED9Q6R2W3 1325 aa18.5■□□□□ 0.55
CDKL1-211ENST00000542671 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.5■□□□□ 0.55
CDKL1-211ENST00000542671 A1BGP04217 495 aa18.5■□□□□ 0.55
CDKL1-211ENST00000542671 IL6STP40189 918 aaPredicted RBP18.5■□□□□ 0.55
CDKL1-211ENST00000542671 AMIGO3Q86WK7 504 aa18.5■□□□□ 0.55
CDKL1-211ENST00000542671 C8orf58Q8NAV2 365 aa18.5■□□□□ 0.55
CDKL1-211ENST00000542671 PSDA5PKW4 1024 aaPredicted RBP18.49■□□□□ 0.55
CDKL1-211ENST00000542671 EIF5P55010 431 aaKnown RBP18.49■□□□□ 0.55
CDKL1-211ENST00000542671 TRAPPC3LQ5T215 181 aa18.49■□□□□ 0.55
CDKL1-211ENST00000542671 COL23A1Q86Y22 540 aaPredicted RBP18.49■□□□□ 0.55
CDKL1-211ENST00000542671 SLC16A10Q8TF71 515 aa18.49■□□□□ 0.55
CDKL1-211ENST00000542671 C4AP0C0L4 1744 aa18.48■□□□□ 0.55
CDKL1-211ENST00000542671 CACNA1FO60840 1977 aa18.48■□□□□ 0.55
CDKL1-211ENST00000542671 A0A087WZG4 1122 aa18.47■□□□□ 0.55
CDKL1-211ENST00000542671 NBPF26B4DH59 902 aa18.47■□□□□ 0.55
CDKL1-211ENST00000542671 CANXP27824 592 aaKnown RBP18.47■□□□□ 0.55
CDKL1-211ENST00000542671 NBPF10Q6P3W6 841 aaKnown RBP18.47■□□□□ 0.55
CDKL1-211ENST00000542671 NBPF15Q8N660 670 aa18.47■□□□□ 0.55
CDKL1-211ENST00000542671 COL24A1Q17RW2 1714 aa18.46■□□□□ 0.55
CDKL1-211ENST00000542671 COL15A1P39059 1388 aa18.46■□□□□ 0.55
CDKL1-211ENST00000542671 EIF2S2P20042 333 aaKnown RBP18.46■□□□□ 0.55
CDKL1-211ENST00000542671 EXOSC9Q06265 439 aaKnown RBP18.46■□□□□ 0.55
CDKL1-211ENST00000542671 HDGFL1Q5TGJ6 251 aa18.46■□□□□ 0.55
CDKL1-211ENST00000542671 TSPYL6Q8N831 410 aa18.46■□□□□ 0.55
CDKL1-211ENST00000542671 ARHGEF1Q92888 912 aaKnown RBP18.46■□□□□ 0.55
CDKL1-211ENST00000542671 CDCA7LQ96GN5 454 aa18.46■□□□□ 0.55
CDKL1-211ENST00000542671 PHF14O94880 888 aa18.45■□□□□ 0.54
CDKL1-211ENST00000542671 PDIA6Q15084 440 aa18.45■□□□□ 0.54
CDKL1-211ENST00000542671 TWISTNBQ3B726 338 aaPredicted RBP18.45■□□□□ 0.54
CDKL1-211ENST00000542671 ELL2O00472 640 aaPredicted RBP18.44■□□□□ 0.54
CDKL1-211ENST00000542671 VAMP4O75379 141 aa18.44■□□□□ 0.54
CDKL1-211ENST00000542671 RFC4P35249 363 aa18.44■□□□□ 0.54
CDKL1-211ENST00000542671 SMIM5Q71RC9 77 aa18.44■□□□□ 0.54
CDKL1-211ENST00000542671 PDGFDQ9GZP0 370 aaPredicted RBP18.44■□□□□ 0.54
CDKL1-211ENST00000542671 DDX21Q9NR30 783 aaKnown RBP eCLIP18.44■□□□□ 0.54
CDKL1-211ENST00000542671 RGL2O15211 777 aa18.43■□□□□ 0.54
CDKL1-211ENST00000542671 CCDC30Q5VVM6 783 aa18.43■□□□□ 0.54
CDKL1-211ENST00000542671 LRP10Q7Z4F1 713 aa18.43■□□□□ 0.54
CDKL1-211ENST00000542671 NPM2Q86SE8 214 aaKnown RBP18.43■□□□□ 0.54
CDKL1-211ENST00000542671 DBF4Q9UBU7 674 aaPredicted RBP18.43■□□□□ 0.54
CDKL1-211ENST00000542671 NARFQ9UHQ1 456 aa18.43■□□□□ 0.54
CDKL1-211ENST00000542671 MTFR1LQ9H019 292 aa18.42■□□□□ 0.54
CDKL1-211ENST00000542671 USP42Q9H9J4 1324 aaKnown RBP18.42■□□□□ 0.54
CDKL1-211ENST00000542671 BCORQ6W2J9 1755 aa18.41■□□□□ 0.54
CDKL1-211ENST00000542671 MSH5O43196 834 aa18.41■□□□□ 0.54
CDKL1-211ENST00000542671 CT47B1P0C2W7 299 aaPredicted RBP18.41■□□□□ 0.54
CDKL1-211ENST00000542671 PIP4K2AP48426 406 aaPredicted RBP18.41■□□□□ 0.54
CDKL1-211ENST00000542671 ZNF428Q96B54 188 aa18.41■□□□□ 0.54
CDKL1-211ENST00000542671 ZPR1O75312 459 aa18.4■□□□□ 0.54
CDKL1-211ENST00000542671 NECTIN2Q92692 538 aa18.4■□□□□ 0.54
CDKL1-211ENST00000542671 HYPKQ9NX55 129 aa18.4■□□□□ 0.54
CDKL1-211ENST00000542671 CHPF2Q9P2E5 772 aa18.4■□□□□ 0.54
CDKL1-211ENST00000542671 SCN7AQ01118 1682 aa18.4■□□□□ 0.54
CDKL1-211ENST00000542671 GYS1P13807 737 aa18.39■□□□□ 0.53
CDKL1-211ENST00000542671 MYL6BP14649 208 aa18.39■□□□□ 0.53
CDKL1-211ENST00000542671 PROSER3Q2NL68 480 aa18.39■□□□□ 0.53
CDKL1-211ENST00000542671 DZIP3Q86Y13 1208 aaKnown RBP18.39■□□□□ 0.53
CDKL1-211ENST00000542671 NLGN1Q8N2Q7 840 aa18.39■□□□□ 0.53
CDKL1-211ENST00000542671 ERVV-1B6SEH8 477 aa18.38■□□□□ 0.53
CDKL1-211ENST00000542671 SPON1Q9HCB6 807 aa18.38■□□□□ 0.53
CDKL1-211ENST00000542671 SRP68Q9UHB9 627 aaKnown RBP18.38■□□□□ 0.53
CDKL1-211ENST00000542671 TBC1D2BQ9UPU7 963 aa18.38■□□□□ 0.53
CDKL1-211ENST00000542671 ZNF330Q9Y3S2 320 aaPredicted RBP18.38■□□□□ 0.53
CDKL1-211ENST00000542671 CAMTA2O94983 1202 aa18.37■□□□□ 0.53
CDKL1-211ENST00000542671 ZBTB7AO95365 584 aa18.37■□□□□ 0.53
CDKL1-211ENST00000542671 USPL1Q5W0Q7 1092 aa18.37■□□□□ 0.53
CDKL1-211ENST00000542671 CLEC4GQ6UXB4 293 aa18.37■□□□□ 0.53
CDKL1-211ENST00000542671 STK31Q9BXU1 1019 aa18.37■□□□□ 0.53
CDKL1-211ENST00000542671 NUP98P52948 1817 aa18.37■□□□□ 0.53
CDKL1-211ENST00000542671 LRP5O75197 1615 aa18.36■□□□□ 0.53
CDKL1-211ENST00000542671 ANXA1P04083 346 aa18.36■□□□□ 0.53
CDKL1-211ENST00000542671 COPS6Q7L5N1 327 aa18.36■□□□□ 0.53
CDKL1-211ENST00000542671 SGIP1Q9BQI5 828 aa18.36■□□□□ 0.53
CDKL1-211ENST00000542671 BCL2L12Q9HB09 334 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms