RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 NEUROD2Q15784 382 aa18.04■□□□□ 0.48
TNFSF13B-206ENST00000542136 ARHGEF1Q92888 912 aaKnown RBP18.04■□□□□ 0.48
TNFSF13B-206ENST00000542136 RRP7AQ9Y3A4 280 aaKnown RBP18.04■□□□□ 0.48
TNFSF13B-206ENST00000542136 CCER2I3L3R5 266 aa18.03■□□□□ 0.48
TNFSF13B-206ENST00000542136 POLD1P28340 1107 aa18.03■□□□□ 0.48
TNFSF13B-206ENST00000542136 EIF4A1P60842 406 aaKnown RBP18.03■□□□□ 0.48
TNFSF13B-206ENST00000542136 KDM3BQ7LBC6 1761 aa18.03■□□□□ 0.48
TNFSF13B-206ENST00000542136 PHF14O94880 888 aa18.02■□□□□ 0.48
TNFSF13B-206ENST00000542136 RFC4P35249 363 aa18.02■□□□□ 0.48
TNFSF13B-206ENST00000542136 NLGN1Q8N2Q7 840 aa18.02■□□□□ 0.48
TNFSF13B-206ENST00000542136 MIS18AQ9NYP9 233 aa18.02■□□□□ 0.48
TNFSF13B-206ENST00000542136 SOS1Q07889 1333 aaPredicted RBP18.01■□□□□ 0.47
TNFSF13B-206ENST00000542136 GIGYF1O75420 1035 aaPredicted RBP18.01■□□□□ 0.47
TNFSF13B-206ENST00000542136 IL6STP40189 918 aaPredicted RBP18.01■□□□□ 0.47
TNFSF13B-206ENST00000542136 CFAP44Q96MT7 982 aa18.01■□□□□ 0.47
TNFSF13B-206ENST00000542136 PPP1R1BQ9UD71 204 aaPredicted RBP18.01■□□□□ 0.47
TNFSF13B-206ENST00000542136 USP16Q9Y5T5 823 aa18.01■□□□□ 0.47
TNFSF13B-206ENST00000542136 A0A087WZG4 1122 aa18■□□□□ 0.47
TNFSF13B-206ENST00000542136 EIF5P55010 431 aaKnown RBP18■□□□□ 0.47
TNFSF13B-206ENST00000542136 ARXQ96QS3 562 aa18■□□□□ 0.47
TNFSF13B-206ENST00000542136 TSPYL4Q9UJ04 414 aa18■□□□□ 0.47
TNFSF13B-206ENST00000542136 ZNF853P0CG23 659 aa17.99■□□□□ 0.47
TNFSF13B-206ENST00000542136 ZBTB1Q9Y2K1 713 aa17.99■□□□□ 0.47
TNFSF13B-206ENST00000542136 USP42Q9H9J4 1324 aaKnown RBP17.98■□□□□ 0.47
TNFSF13B-206ENST00000542136 IFT57Q9NWB7 429 aa17.98■□□□□ 0.47
TNFSF13B-206ENST00000542136 NARFQ9UHQ1 456 aa17.98■□□□□ 0.47
TNFSF13B-206ENST00000542136 RGL2O15211 777 aa17.97■□□□□ 0.47
TNFSF13B-206ENST00000542136 ZPR1O75312 459 aa17.97■□□□□ 0.47
TNFSF13B-206ENST00000542136 GYS1P13807 737 aa17.97■□□□□ 0.47
TNFSF13B-206ENST00000542136 GNAI1P63096 354 aa17.97■□□□□ 0.47
TNFSF13B-206ENST00000542136 DIEXFQ68CQ4 756 aaKnown RBP17.97■□□□□ 0.47
TNFSF13B-206ENST00000542136 SMIM5Q71RC9 77 aa17.97■□□□□ 0.47
TNFSF13B-206ENST00000542136 SRCAPQ6ZRS2 3230 aa17.96■□□□□ 0.47
TNFSF13B-206ENST00000542136 COL15A1P39059 1388 aa17.96■□□□□ 0.47
TNFSF13B-206ENST00000542136 A1BGP04217 495 aa17.96■□□□□ 0.47
TNFSF13B-206ENST00000542136 HOXB7P09629 217 aa17.96■□□□□ 0.47
TNFSF13B-206ENST00000542136 CANXP27824 592 aaKnown RBP17.96■□□□□ 0.47
TNFSF13B-206ENST00000542136 WWC1Q8IX03 1113 aa17.96■□□□□ 0.47
TNFSF13B-206ENST00000542136 IL16Q14005 1332 aa17.96■□□□□ 0.46
TNFSF13B-206ENST00000542136 ERBB4Q15303 1308 aa17.96■□□□□ 0.46
TNFSF13B-206ENST00000542136 C4AP0C0L4 1744 aa17.95■□□□□ 0.46
TNFSF13B-206ENST00000542136 NPM2Q86SE8 214 aaKnown RBP17.95■□□□□ 0.46
TNFSF13B-206ENST00000542136 FAM9BQ8IZU0 186 aa17.95■□□□□ 0.46
TNFSF13B-206ENST00000542136 PRAMEF22A3QJZ6 481 aa17.94■□□□□ 0.46
TNFSF13B-206ENST00000542136 WDR63Q8IWG1 891 aa17.94■□□□□ 0.46
TNFSF13B-206ENST00000542136 MSL1Q68DK7 614 aa17.93■□□□□ 0.46
TNFSF13B-206ENST00000542136 SYT17Q9BSW7 474 aa17.93■□□□□ 0.46
TNFSF13B-206ENST00000542136 CHMP4AQ9BY43 222 aa17.93■□□□□ 0.46
TNFSF13B-206ENST00000542136 CD2APQ9Y5K6 639 aa17.93■□□□□ 0.46
TNFSF13B-206ENST00000542136 LAMB4A4D0S4 1761 aa17.93■□□□□ 0.46
TNFSF13B-206ENST00000542136 NBPF26B4DH59 902 aa17.92■□□□□ 0.46
TNFSF13B-206ENST00000542136 TM4SF1P30408 202 aa17.92■□□□□ 0.46
TNFSF13B-206ENST00000542136 NBPF10Q6P3W6 841 aaKnown RBP17.92■□□□□ 0.46
TNFSF13B-206ENST00000542136 NBPF15Q8N660 670 aa17.92■□□□□ 0.46
TNFSF13B-206ENST00000542136 FHDC1Q9C0D6 1143 aaPredicted RBP17.92■□□□□ 0.46
TNFSF13B-206ENST00000542136 MBIPQ9NS73 344 aa17.92■□□□□ 0.46
TNFSF13B-206ENST00000542136 LAS1LQ9Y4W2 734 aaKnown RBP17.92■□□□□ 0.46
TNFSF13B-206ENST00000542136 MMP10P09238 476 aa17.91■□□□□ 0.46
TNFSF13B-206ENST00000542136 CLEC4GQ6UXB4 293 aa17.91■□□□□ 0.46
TNFSF13B-206ENST00000542136 SRP68Q9UHB9 627 aaKnown RBP17.91■□□□□ 0.46
TNFSF13B-206ENST00000542136 FKBP8Q14318 412 aa17.9■□□□□ 0.46
TNFSF13B-206ENST00000542136 USPL1Q5W0Q7 1092 aa17.9■□□□□ 0.46
TNFSF13B-206ENST00000542136 BCL2L12Q9HB09 334 aa17.89■□□□□ 0.45
TNFSF13B-206ENST00000542136 DZIP3Q86Y13 1208 aaKnown RBP17.88■□□□□ 0.45
TNFSF13B-206ENST00000542136 PARP3Q9Y6F1 533 aa17.88■□□□□ 0.45
TNFSF13B-206ENST00000542136 ERVV-1B6SEH8 477 aa17.87■□□□□ 0.45
TNFSF13B-206ENST00000542136 CAMTA2O94983 1202 aa17.87■□□□□ 0.45
TNFSF13B-206ENST00000542136 TBC1D2BQ9UPU7 963 aa17.87■□□□□ 0.45
TNFSF13B-206ENST00000542136 PDIA6Q15084 440 aa17.86■□□□□ 0.45
TNFSF13B-206ENST00000542136 DUSP27Q5VZP5 1158 aa17.86■□□□□ 0.45
TNFSF13B-206ENST00000542136 ZNF652Q9Y2D9 606 aa17.86■□□□□ 0.45
TNFSF13B-206ENST00000542136 POLRMTO00411 1230 aaKnown RBP17.85■□□□□ 0.45
TNFSF13B-206ENST00000542136 NFIXQ14938 502 aa17.85■□□□□ 0.45
TNFSF13B-206ENST00000542136 LRP10Q7Z4F1 713 aa17.85■□□□□ 0.45
TNFSF13B-206ENST00000542136 MIER1Q8N108 512 aa17.85■□□□□ 0.45
TNFSF13B-206ENST00000542136 DDX21Q9NR30 783 aaKnown RBP eCLIP17.85■□□□□ 0.45
TNFSF13B-206ENST00000542136 ZNF330Q9Y3S2 320 aaPredicted RBP17.85■□□□□ 0.45
TNFSF13B-206ENST00000542136 SCN7AQ01118 1682 aa17.84■□□□□ 0.45
TNFSF13B-206ENST00000542136 ZNF521Q96K83 1311 aa17.84■□□□□ 0.45
TNFSF13B-206ENST00000542136 DCAF8L1A6NGE4 600 aa17.84■□□□□ 0.45
TNFSF13B-206ENST00000542136 EIF2S2P20042 333 aaKnown RBP17.84■□□□□ 0.45
TNFSF13B-206ENST00000542136 TGFB2P61812 414 aa17.84■□□□□ 0.45
TNFSF13B-206ENST00000542136 DBF4Q9UBU7 674 aaPredicted RBP17.84■□□□□ 0.45
TNFSF13B-206ENST00000542136 PIP4K2AP48426 406 aaPredicted RBP17.83■□□□□ 0.44
TNFSF13B-206ENST00000542136 DDR1Q08345 913 aa17.83■□□□□ 0.44
TNFSF13B-206ENST00000542136 KRT24Q2M2I5 525 aa17.83■□□□□ 0.44
TNFSF13B-206ENST00000542136 HDGFL1Q5TGJ6 251 aa17.83■□□□□ 0.44
TNFSF13B-206ENST00000542136 KIF13BQ9NQT8 1826 aa17.82■□□□□ 0.44
TNFSF13B-206ENST00000542136 BCORQ6W2J9 1755 aa17.82■□□□□ 0.44
TNFSF13B-206ENST00000542136 SETDB2Q96T68 719 aa17.82■□□□□ 0.44
TNFSF13B-206ENST00000542136 HYPKQ9NX55 129 aa17.82■□□□□ 0.44
TNFSF13B-206ENST00000542136 C10orf71Q711Q0 1435 aa17.81■□□□□ 0.44
TNFSF13B-206ENST00000542136 MAP3K15Q6ZN16 1313 aa17.81■□□□□ 0.44
TNFSF13B-206ENST00000542136 MYL6BP14649 208 aa17.81■□□□□ 0.44
TNFSF13B-206ENST00000542136 TBC1D9BQ66K14 1250 aa17.81■□□□□ 0.44
TNFSF13B-206ENST00000542136 KIF6Q6ZMV9 814 aa17.81■□□□□ 0.44
TNFSF13B-206ENST00000542136 C8orf58Q8NAV2 365 aa17.81■□□□□ 0.44
TNFSF13B-206ENST00000542136 MYH16Q9H6N6 1097 aa17.81■□□□□ 0.44
TNFSF13B-206ENST00000542136 NRXN2Q9P2S2 1712 aa17.81■□□□□ 0.44
TNFSF13B-206ENST00000542136 CARMIL3Q8ND23 1372 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms