RNA–Protein interactions for RNA: ENST00000540771.5

RAB6A-206, Transcript of RAB6A, member RAS oncogene family, human

TSL 5

Gene RAB6A, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB6A-206	ENST00000540771	HNRNPU	Q00839	825 aa	Known RBP eCLIP	29.03	■■■□□ 2.24
RAB6A-206	ENST00000540771	SPINK5	Q9NQ38	1064 aa	Predicted RBP	29.03	■■■□□ 2.24
RAB6A-206	ENST00000540771	GOLGA2	Q08379	1002 aa		29.02	■■■□□ 2.24
RAB6A-206	ENST00000540771	FLAD1	Q8NFF5	587 aa		29.02	■■■□□ 2.24
RAB6A-206	ENST00000540771	TSR2	Q969E8	191 aa	Known RBP	29.02	■■■□□ 2.24
RAB6A-206	ENST00000540771	PNPLA7	Q6ZV29	1317 aa		29.01	■■■□□ 2.23
RAB6A-206	ENST00000540771	KRT24	Q2M2I5	525 aa		29.01	■■■□□ 2.23
RAB6A-206	ENST00000540771	AMIGO3	Q86WK7	504 aa		29.01	■■■□□ 2.23
RAB6A-206	ENST00000540771	RTCB	Q9Y3I0	505 aa	Known RBP	29.01	■■■□□ 2.23
RAB6A-206	ENST00000540771	SSFA2	P28290	1259 aa		29	■■■□□ 2.23
RAB6A-206	ENST00000540771	MYH16	Q9H6N6	1097 aa		29	■■■□□ 2.23
RAB6A-206	ENST00000540771	A1BG	P04217	495 aa		28.99	■■■□□ 2.23
RAB6A-206	ENST00000540771	HOXB7	P09629	217 aa		28.99	■■■□□ 2.23
RAB6A-206	ENST00000540771	ZBTB1	Q9Y2K1	713 aa		28.99	■■■□□ 2.23
RAB6A-206	ENST00000540771	FANCI	Q9NVI1	1328 aa		28.98	■■■□□ 2.23
RAB6A-206	ENST00000540771	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	28.98	■■■□□ 2.23
RAB6A-206	ENST00000540771	MYH14	Q7Z406	1995 aa	Known RBP	28.98	■■■□□ 2.23
RAB6A-206	ENST00000540771		E9PSI1	815 aa		28.97	■■■□□ 2.23
RAB6A-206	ENST00000540771	ADRA2B	P18089	450 aa		28.97	■■■□□ 2.23
RAB6A-206	ENST00000540771	DUSP27	Q5VZP5	1158 aa		28.97	■■■□□ 2.23
RAB6A-206	ENST00000540771	SMIM5	Q71RC9	77 aa		28.97	■■■□□ 2.23
RAB6A-206	ENST00000540771	COL23A1	Q86Y22	540 aa	Predicted RBP	28.97	■■■□□ 2.23
RAB6A-206	ENST00000540771	C8orf58	Q8NAV2	365 aa		28.97	■■■□□ 2.23
RAB6A-206	ENST00000540771	CANX	P27824	592 aa	Known RBP	28.96	■■■□□ 2.23
RAB6A-206	ENST00000540771	TRAPPC3L	Q5T215	181 aa		28.96	■■■□□ 2.23
RAB6A-206	ENST00000540771	PDGFD	Q9GZP0	370 aa	Predicted RBP	28.96	■■■□□ 2.23
RAB6A-206	ENST00000540771	SOS1	Q07889	1333 aa	Predicted RBP	28.95	■■■□□ 2.23
RAB6A-206	ENST00000540771	QSER1	Q2KHR3	1735 aa		28.95	■■■□□ 2.23
RAB6A-206	ENST00000540771	PHF14	O94880	888 aa		28.95	■■■□□ 2.22
RAB6A-206	ENST00000540771	SLFN5	Q08AF3	891 aa		28.95	■■■□□ 2.22
RAB6A-206	ENST00000540771	UBR3	Q6ZT12	1888 aa		28.95	■■■□□ 2.22
RAB6A-206	ENST00000540771	IL6ST	P40189	918 aa	Predicted RBP	28.94	■■■□□ 2.22
RAB6A-206	ENST00000540771	EIF5	P55010	431 aa	Known RBP	28.94	■■■□□ 2.22
RAB6A-206	ENST00000540771	NBPF26	B4DH59	902 aa		28.93	■■■□□ 2.22
RAB6A-206	ENST00000540771	EIF2S2	P20042	333 aa	Known RBP	28.93	■■■□□ 2.22
RAB6A-206	ENST00000540771	NBPF10	Q6P3W6	841 aa	Known RBP	28.93	■■■□□ 2.22
RAB6A-206	ENST00000540771	NBPF15	Q8N660	670 aa		28.93	■■■□□ 2.22
RAB6A-206	ENST00000540771	ARHGEF1	Q92888	912 aa	Known RBP	28.93	■■■□□ 2.22
RAB6A-206	ENST00000540771	ERBB4	Q15303	1308 aa		28.93	■■■□□ 2.22
RAB6A-206	ENST00000540771	TUBGCP6	Q96RT7	1819 aa		28.92	■■■□□ 2.22
RAB6A-206	ENST00000540771	ELL2	O00472	640 aa	Predicted RBP	28.92	■■■□□ 2.22
RAB6A-206	ENST00000540771	TSPYL6	Q8N831	410 aa		28.92	■■■□□ 2.22
RAB6A-206	ENST00000540771	SLC16A10	Q8TF71	515 aa		28.92	■■■□□ 2.22
RAB6A-206	ENST00000540771	CDCA7L	Q96GN5	454 aa		28.92	■■■□□ 2.22
RAB6A-206	ENST00000540771	LAMB4	A4D0S4	1761 aa		28.92	■■■□□ 2.22
RAB6A-206	ENST00000540771	TRMT2A	Q8IZ69	625 aa	Known RBP	28.91	■■■□□ 2.22
RAB6A-206	ENST00000540771	MSH5	O43196	834 aa		28.9	■■■□□ 2.22
RAB6A-206	ENST00000540771	EXOSC9	Q06265	439 aa	Known RBP	28.9	■■■□□ 2.22
RAB6A-206	ENST00000540771	ZBED9	Q6R2W3	1325 aa		28.9	■■■□□ 2.22
RAB6A-206	ENST00000540771	PIP4K2A	P48426	406 aa	Predicted RBP	28.89	■■■□□ 2.22
RAB6A-206	ENST00000540771	TWISTNB	Q3B726	338 aa	Predicted RBP	28.89	■■■□□ 2.22
RAB6A-206	ENST00000540771	HDGFL1	Q5TGJ6	251 aa		28.89	■■■□□ 2.22
RAB6A-206	ENST00000540771	CHMP4A	Q9BY43	222 aa		28.89	■■■□□ 2.22
RAB6A-206	ENST00000540771	COL15A1	P39059	1388 aa		28.88	■■■□□ 2.21
RAB6A-206	ENST00000540771	CASZ1	Q86V15	1759 aa		28.88	■■■□□ 2.21
RAB6A-206	ENST00000540771		A0A087WZG4	1122 aa		28.88	■■■□□ 2.21
RAB6A-206	ENST00000540771	RFC4	P35249	363 aa		28.88	■■■□□ 2.21
RAB6A-206	ENST00000540771	PDIA6	Q15084	440 aa		28.88	■■■□□ 2.21
RAB6A-206	ENST00000540771	NECTIN2	Q92692	538 aa		28.87	■■■□□ 2.21
RAB6A-206	ENST00000540771	NPM2	Q86SE8	214 aa	Known RBP	28.86	■■■□□ 2.21
RAB6A-206	ENST00000540771	DDX21	Q9NR30	783 aa	Known RBP eCLIP	28.85	■■■□□ 2.21
RAB6A-206	ENST00000540771	ZNF330	Q9Y3S2	320 aa	Predicted RBP	28.85	■■■□□ 2.21
RAB6A-206	ENST00000540771	VAMP4	O75379	141 aa		28.84	■■■□□ 2.21
RAB6A-206	ENST00000540771	MTFR1L	Q9H019	292 aa		28.84	■■■□□ 2.21
RAB6A-206	ENST00000540771	DBF4	Q9UBU7	674 aa	Predicted RBP	28.84	■■■□□ 2.21
RAB6A-206	ENST00000540771	NARF	Q9UHQ1	456 aa		28.84	■■■□□ 2.21
RAB6A-206	ENST00000540771	ZBTB7A	O95365	584 aa		28.83	■■■□□ 2.21
RAB6A-206	ENST00000540771	MYL6B	P14649	208 aa		28.83	■■■□□ 2.21
RAB6A-206	ENST00000540771	CCDC30	Q5VVM6	783 aa		28.83	■■■□□ 2.21
RAB6A-206	ENST00000540771	LRP10	Q7Z4F1	713 aa		28.83	■■■□□ 2.21
RAB6A-206	ENST00000540771	CHPF2	Q9P2E5	772 aa		28.82	■■■□□ 2.2
RAB6A-206	ENST00000540771	USP42	Q9H9J4	1324 aa	Known RBP	28.82	■■■□□ 2.2
RAB6A-206	ENST00000540771	ZPR1	O75312	459 aa		28.81	■■■□□ 2.2
RAB6A-206	ENST00000540771	PROSER3	Q2NL68	480 aa		28.81	■■■□□ 2.2
RAB6A-206	ENST00000540771	SRP68	Q9UHB9	627 aa	Known RBP	28.81	■■■□□ 2.2
RAB6A-206	ENST00000540771	TBC1D2B	Q9UPU7	963 aa		28.81	■■■□□ 2.2
RAB6A-206	ENST00000540771	ANXA1	P04083	346 aa		28.8	■■■□□ 2.2
RAB6A-206	ENST00000540771	GYS1	P13807	737 aa		28.8	■■■□□ 2.2
RAB6A-206	ENST00000540771	DZIP3	Q86Y13	1208 aa	Known RBP	28.8	■■■□□ 2.2
RAB6A-206	ENST00000540771	USPL1	Q5W0Q7	1092 aa		28.79	■■■□□ 2.2
RAB6A-206	ENST00000540771	SPON1	Q9HCB6	807 aa		28.79	■■■□□ 2.2
RAB6A-206	ENST00000540771	ATF5	Q9Y2D1	282 aa	Predicted RBP	28.79	■■■□□ 2.2
RAB6A-206	ENST00000540771	NLGN1	Q8N2Q7	840 aa		28.78	■■■□□ 2.2
RAB6A-206	ENST00000540771	ARX	Q96QS3	562 aa		28.78	■■■□□ 2.2
RAB6A-206	ENST00000540771	HYPK	Q9NX55	129 aa		28.78	■■■□□ 2.2
RAB6A-206	ENST00000540771	C4A	P0C0L4	1744 aa		28.77	■■■□□ 2.2
RAB6A-206	ENST00000540771	CAMTA2	O94983	1202 aa		28.76	■■■□□ 2.19
RAB6A-206	ENST00000540771	BCL2L12	Q9HB09	334 aa		28.76	■■■□□ 2.19
RAB6A-206	ENST00000540771	MSL1	Q68DK7	614 aa		28.75	■■■□□ 2.19
RAB6A-206	ENST00000540771	TTLL7	Q6ZT98	887 aa		28.75	■■■□□ 2.19
RAB6A-206	ENST00000540771	STK31	Q9BXU1	1019 aa		28.75	■■■□□ 2.19
RAB6A-206	ENST00000540771	RGL2	O15211	777 aa		28.74	■■■□□ 2.19
RAB6A-206	ENST00000540771	FKBP8	Q14318	412 aa		28.74	■■■□□ 2.19
RAB6A-206	ENST00000540771	COPS6	Q7L5N1	327 aa		28.74	■■■□□ 2.19
RAB6A-206	ENST00000540771	SGIP1	Q9BQI5	828 aa		28.74	■■■□□ 2.19
RAB6A-206	ENST00000540771	CT47B1	P0C2W7	299 aa	Predicted RBP	28.73	■■■□□ 2.19
RAB6A-206	ENST00000540771	PTGER2	P43116	358 aa		28.73	■■■□□ 2.19
RAB6A-206	ENST00000540771	XAGE3	Q8WTP9	111 aa		28.73	■■■□□ 2.19
RAB6A-206	ENST00000540771	ERVV-1	B6SEH8	477 aa		28.72	■■■□□ 2.19
RAB6A-206	ENST00000540771	TCERG1	O14776	1098 aa	Known RBP	28.72	■■■□□ 2.19

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