RNA–Protein interactions for RNA: ENST00000540712.1

LRR1-203, Transcript of leucine rich repeat protein 1, humanhuman

TSL 1 (best)

Gene LRR1, Length 1,597 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRR1-203ENST00000540712 NPM2Q86SE8 214 aaKnown RBP19.82■□□□□ 0.76
LRR1-203ENST00000540712 WDR63Q8IWG1 891 aa19.82■□□□□ 0.76
LRR1-203ENST00000540712 CICQ96RK0 1608 aaPredicted RBP19.82■□□□□ 0.76
LRR1-203ENST00000540712 MBIPQ9NS73 344 aa19.81■□□□□ 0.76
LRR1-203ENST00000540712 COL5A3P25940 1745 aaPredicted RBP19.81■□□□□ 0.76
LRR1-203ENST00000540712 IL16Q14005 1332 aa19.8■□□□□ 0.76
LRR1-203ENST00000540712 GIGYF1O75420 1035 aaPredicted RBP19.8■□□□□ 0.76
LRR1-203ENST00000540712 ZNF853P0CG23 659 aa19.8■□□□□ 0.76
LRR1-203ENST00000540712 ADRA2BP18089 450 aa19.8■□□□□ 0.76
LRR1-203ENST00000540712 INTS5Q6P9B9 1019 aaKnown RBP19.8■□□□□ 0.76
LRR1-203ENST00000540712 USP16Q9Y5T5 823 aa19.8■□□□□ 0.76
LRR1-203ENST00000540712 PRAMEF22A3QJZ6 481 aa19.79■□□□□ 0.76
LRR1-203ENST00000540712 CANXP27824 592 aaKnown RBP19.79■□□□□ 0.76
LRR1-203ENST00000540712 COL23A1Q86Y22 540 aaPredicted RBP19.79■□□□□ 0.76
LRR1-203ENST00000540712 SLC16A10Q8TF71 515 aa19.79■□□□□ 0.76
LRR1-203ENST00000540712 PDGFDQ9GZP0 370 aaPredicted RBP19.78■□□□□ 0.76
LRR1-203ENST00000540712 ZBTB1Q9Y2K1 713 aa19.78■□□□□ 0.76
LRR1-203ENST00000540712 ZBTB7AO95365 584 aa19.78■□□□□ 0.76
LRR1-203ENST00000540712 RFC4P35249 363 aa19.78■□□□□ 0.76
LRR1-203ENST00000540712 QSER1Q2KHR3 1735 aa19.77■□□□□ 0.76
LRR1-203ENST00000540712 A1BGP04217 495 aa19.77■□□□□ 0.76
LRR1-203ENST00000540712 SMIM5Q71RC9 77 aa19.77■□□□□ 0.76
LRR1-203ENST00000540712 MTFR1LQ9H019 292 aa19.77■□□□□ 0.76
LRR1-203ENST00000540712 ZNF330Q9Y3S2 320 aaPredicted RBP19.77■□□□□ 0.76
LRR1-203ENST00000540712 AMIGO3Q86WK7 504 aa19.76■□□□□ 0.75
LRR1-203ENST00000540712 SPON1Q9HCB6 807 aa19.76■□□□□ 0.75
LRR1-203ENST00000540712 EIF2S2P20042 333 aaKnown RBP19.75■□□□□ 0.75
LRR1-203ENST00000540712 ARHGEF1Q92888 912 aaKnown RBP19.75■□□□□ 0.75
LRR1-203ENST00000540712 UBR3Q6ZT12 1888 aa19.75■□□□□ 0.75
LRR1-203ENST00000540712 SOS1Q07889 1333 aaPredicted RBP19.75■□□□□ 0.75
LRR1-203ENST00000540712 A0A087WZG4 1122 aa19.74■□□□□ 0.75
LRR1-203ENST00000540712 IL6STP40189 918 aaPredicted RBP19.74■□□□□ 0.75
LRR1-203ENST00000540712 TSR2Q969E8 191 aaKnown RBP19.74■□□□□ 0.75
LRR1-203ENST00000540712 MYH16Q9H6N6 1097 aa19.74■□□□□ 0.75
LRR1-203ENST00000540712 TUBGCP6Q96RT7 1819 aa19.74■□□□□ 0.75
LRR1-203ENST00000540712 MYH14Q7Z406 1995 aaKnown RBP19.74■□□□□ 0.75
LRR1-203ENST00000540712 HOXB7P09629 217 aa19.74■□□□□ 0.75
LRR1-203ENST00000540712 ATF5Q9Y2D1 282 aaPredicted RBP19.74■□□□□ 0.75
LRR1-203ENST00000540712 CASZ1Q86V15 1759 aa19.74■□□□□ 0.75
LRR1-203ENST00000540712 ZPR1O75312 459 aa19.73■□□□□ 0.75
LRR1-203ENST00000540712 GOLGA2Q08379 1002 aa19.73■□□□□ 0.75
LRR1-203ENST00000540712 KRT24Q2M2I5 525 aa19.73■□□□□ 0.75
LRR1-203ENST00000540712 DUSP27Q5VZP5 1158 aa19.73■□□□□ 0.75
LRR1-203ENST00000540712 ARXQ96QS3 562 aa19.73■□□□□ 0.75
LRR1-203ENST00000540712 COL15A1P39059 1388 aa19.73■□□□□ 0.75
LRR1-203ENST00000540712 EIF5P55010 431 aaKnown RBP19.72■□□□□ 0.75
LRR1-203ENST00000540712 CHMP4AQ9BY43 222 aa19.72■□□□□ 0.75
LRR1-203ENST00000540712 POLD1P28340 1107 aa19.71■□□□□ 0.75
LRR1-203ENST00000540712 PIP4K2AP48426 406 aaPredicted RBP19.71■□□□□ 0.75
LRR1-203ENST00000540712 HNRNPUQ00839 825 aaKnown RBP eCLIP19.71■□□□□ 0.75
LRR1-203ENST00000540712 ERBB4Q15303 1308 aa19.71■□□□□ 0.75
LRR1-203ENST00000540712 ZNF521Q96K83 1311 aa19.71■□□□□ 0.75
LRR1-203ENST00000540712 ELL2O00472 640 aaPredicted RBP19.7■□□□□ 0.74
LRR1-203ENST00000540712 HDGFL1Q5TGJ6 251 aa19.7■□□□□ 0.74
LRR1-203ENST00000540712 LAMB4A4D0S4 1761 aa19.7■□□□□ 0.74
LRR1-203ENST00000540712 FANCIQ9NVI1 1328 aa19.7■□□□□ 0.74
LRR1-203ENST00000540712 MSL1Q68DK7 614 aa19.7■□□□□ 0.74
LRR1-203ENST00000540712 NECTIN2Q92692 538 aa19.7■□□□□ 0.74
LRR1-203ENST00000540712 E9PSI1 815 aa19.69■□□□□ 0.74
LRR1-203ENST00000540712 MYL6BP14649 208 aa19.69■□□□□ 0.74
LRR1-203ENST00000540712 NLGN1Q8N2Q7 840 aa19.69■□□□□ 0.74
LRR1-203ENST00000540712 PPP1R1BQ9UD71 204 aaPredicted RBP19.69■□□□□ 0.74
LRR1-203ENST00000540712 NARFQ9UHQ1 456 aa19.69■□□□□ 0.74
LRR1-203ENST00000540712 USP42Q9H9J4 1324 aaKnown RBP19.68■□□□□ 0.74
LRR1-203ENST00000540712 NBPF26B4DH59 902 aa19.68■□□□□ 0.74
LRR1-203ENST00000540712 NBPF10Q6P3W6 841 aaKnown RBP19.68■□□□□ 0.74
LRR1-203ENST00000540712 NBPF15Q8N660 670 aa19.68■□□□□ 0.74
LRR1-203ENST00000540712 C8orf58Q8NAV2 365 aa19.68■□□□□ 0.74
LRR1-203ENST00000540712 USPL1Q5W0Q7 1092 aa19.67■□□□□ 0.74
LRR1-203ENST00000540712 DZIP3Q86Y13 1208 aaKnown RBP19.67■□□□□ 0.74
LRR1-203ENST00000540712 SPINK5Q9NQ38 1064 aaPredicted RBP19.67■□□□□ 0.74
LRR1-203ENST00000540712 SRP68Q9UHB9 627 aaKnown RBP19.67■□□□□ 0.74
LRR1-203ENST00000540712 TBC1D2BQ9UPU7 963 aa19.67■□□□□ 0.74
LRR1-203ENST00000540712 GYS1P13807 737 aa19.66■□□□□ 0.74
LRR1-203ENST00000540712 TWISTNBQ3B726 338 aaPredicted RBP19.66■□□□□ 0.74
LRR1-203ENST00000540712 DBF4Q9UBU7 674 aaPredicted RBP19.66■□□□□ 0.74
LRR1-203ENST00000540712 EXOSC9Q06265 439 aaKnown RBP19.65■□□□□ 0.74
LRR1-203ENST00000540712 CCDC30Q5VVM6 783 aa19.65■□□□□ 0.74
LRR1-203ENST00000540712 KIF6Q6ZMV9 814 aa19.65■□□□□ 0.74
LRR1-203ENST00000540712 TSPYL6Q8N831 410 aa19.65■□□□□ 0.74
LRR1-203ENST00000540712 DDX21Q9NR30 783 aaKnown RBP eCLIP19.65■□□□□ 0.74
LRR1-203ENST00000540712 PTGER2P43116 358 aa19.64■□□□□ 0.73
LRR1-203ENST00000540712 CHPF2Q9P2E5 772 aa19.64■□□□□ 0.73
LRR1-203ENST00000540712 C4AP0C0L4 1744 aa19.63■□□□□ 0.73
LRR1-203ENST00000540712 SLFN5Q08AF3 891 aa19.63■□□□□ 0.73
LRR1-203ENST00000540712 ZNF652Q9Y2D9 606 aa19.63■□□□□ 0.73
LRR1-203ENST00000540712 FKBP8Q14318 412 aa19.62■□□□□ 0.73
LRR1-203ENST00000540712 PDIA6Q15084 440 aa19.62■□□□□ 0.73
LRR1-203ENST00000540712 STK31Q9BXU1 1019 aa19.62■□□□□ 0.73
LRR1-203ENST00000540712 ANXA1P04083 346 aa19.61■□□□□ 0.73
LRR1-203ENST00000540712 SGIP1Q9BQI5 828 aa19.61■□□□□ 0.73
LRR1-203ENST00000540712 HYPKQ9NX55 129 aa19.61■□□□□ 0.73
LRR1-203ENST00000540712 CAMTA2O94983 1202 aa19.61■□□□□ 0.73
LRR1-203ENST00000540712 MMP10P09238 476 aa19.61■□□□□ 0.73
LRR1-203ENST00000540712 PROSER3Q2NL68 480 aa19.61■□□□□ 0.73
LRR1-203ENST00000540712 CDCA7LQ96GN5 454 aa19.61■□□□□ 0.73
LRR1-203ENST00000540712 PARP3Q9Y6F1 533 aa19.61■□□□□ 0.73
LRR1-203ENST00000540712 AIMP1Q12904 312 aaKnown RBP19.6■□□□□ 0.73
LRR1-203ENST00000540712 CLEC4GQ6UXB4 293 aa19.6■□□□□ 0.73
LRR1-203ENST00000540712 COPS6Q7L5N1 327 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms