RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 RTCBQ9Y3I0 505 aaKnown RBP19.39■□□□□ 0.69
MDM1-210ENST00000540418 COL5A3P25940 1745 aaPredicted RBP19.39■□□□□ 0.69
MDM1-210ENST00000540418 PNPLA7Q6ZV29 1317 aa19.38■□□□□ 0.69
MDM1-210ENST00000540418 SSFA2P28290 1259 aa19.38■□□□□ 0.69
MDM1-210ENST00000540418 AMIGO3Q86WK7 504 aa19.38■□□□□ 0.69
MDM1-210ENST00000540418 TSR2Q969E8 191 aaKnown RBP19.37■□□□□ 0.69
MDM1-210ENST00000540418 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.36■□□□□ 0.69
MDM1-210ENST00000540418 A1BGP04217 495 aa19.36■□□□□ 0.69
MDM1-210ENST00000540418 GOLGA2Q08379 1002 aa19.36■□□□□ 0.69
MDM1-210ENST00000540418 KRT24Q2M2I5 525 aa19.36■□□□□ 0.69
MDM1-210ENST00000540418 COL23A1Q86Y22 540 aaPredicted RBP19.36■□□□□ 0.69
MDM1-210ENST00000540418 SPINK5Q9NQ38 1064 aaPredicted RBP19.36■□□□□ 0.69
MDM1-210ENST00000540418 PHF14O94880 888 aa19.36■□□□□ 0.69
MDM1-210ENST00000540418 HNRNPUQ00839 825 aaKnown RBP eCLIP19.36■□□□□ 0.69
MDM1-210ENST00000540418 TRAPPC3LQ5T215 181 aa19.36■□□□□ 0.69
MDM1-210ENST00000540418 SMIM5Q71RC9 77 aa19.36■□□□□ 0.69
MDM1-210ENST00000540418 PDGFDQ9GZP0 370 aaPredicted RBP19.36■□□□□ 0.69
MDM1-210ENST00000540418 ZBTB1Q9Y2K1 713 aa19.36■□□□□ 0.69
MDM1-210ENST00000540418 MYH16Q9H6N6 1097 aa19.35■□□□□ 0.69
MDM1-210ENST00000540418 ADRA2BP18089 450 aa19.35■□□□□ 0.69
MDM1-210ENST00000540418 CANXP27824 592 aaKnown RBP19.35■□□□□ 0.69
MDM1-210ENST00000540418 HOXB7P09629 217 aa19.34■□□□□ 0.69
MDM1-210ENST00000540418 DUSP27Q5VZP5 1158 aa19.34■□□□□ 0.69
MDM1-210ENST00000540418 MSH5O43196 834 aa19.34■□□□□ 0.69
MDM1-210ENST00000540418 SOS1Q07889 1333 aaPredicted RBP19.34■□□□□ 0.69
MDM1-210ENST00000540418 FANCIQ9NVI1 1328 aa19.34■□□□□ 0.69
MDM1-210ENST00000540418 C8orf58Q8NAV2 365 aa19.33■□□□□ 0.69
MDM1-210ENST00000540418 ARHGEF1Q92888 912 aaKnown RBP19.33■□□□□ 0.69
MDM1-210ENST00000540418 EIF2S2P20042 333 aaKnown RBP19.33■□□□□ 0.68
MDM1-210ENST00000540418 SLC16A10Q8TF71 515 aa19.33■□□□□ 0.68
MDM1-210ENST00000540418 MYH14Q7Z406 1995 aaKnown RBP19.33■□□□□ 0.68
MDM1-210ENST00000540418 E9PSI1 815 aa19.32■□□□□ 0.68
MDM1-210ENST00000540418 IL6STP40189 918 aaPredicted RBP19.32■□□□□ 0.68
MDM1-210ENST00000540418 EIF5P55010 431 aaKnown RBP19.32■□□□□ 0.68
MDM1-210ENST00000540418 QSER1Q2KHR3 1735 aa19.32■□□□□ 0.68
MDM1-210ENST00000540418 NBPF26B4DH59 902 aa19.31■□□□□ 0.68
MDM1-210ENST00000540418 ELL2O00472 640 aaPredicted RBP19.31■□□□□ 0.68
MDM1-210ENST00000540418 NBPF10Q6P3W6 841 aaKnown RBP19.31■□□□□ 0.68
MDM1-210ENST00000540418 UBR3Q6ZT12 1888 aa19.31■□□□□ 0.68
MDM1-210ENST00000540418 NBPF15Q8N660 670 aa19.31■□□□□ 0.68
MDM1-210ENST00000540418 RFC4P35249 363 aa19.31■□□□□ 0.68
MDM1-210ENST00000540418 SLFN5Q08AF3 891 aa19.31■□□□□ 0.68
MDM1-210ENST00000540418 PIP4K2AP48426 406 aaPredicted RBP19.3■□□□□ 0.68
MDM1-210ENST00000540418 TUBGCP6Q96RT7 1819 aa19.3■□□□□ 0.68
MDM1-210ENST00000540418 ERBB4Q15303 1308 aa19.3■□□□□ 0.68
MDM1-210ENST00000540418 TSPYL6Q8N831 410 aa19.3■□□□□ 0.68
MDM1-210ENST00000540418 A0A087WZG4 1122 aa19.29■□□□□ 0.68
MDM1-210ENST00000540418 NPM2Q86SE8 214 aaKnown RBP19.29■□□□□ 0.68
MDM1-210ENST00000540418 CDCA7LQ96GN5 454 aa19.29■□□□□ 0.68
MDM1-210ENST00000540418 ZBTB7AO95365 584 aa19.29■□□□□ 0.68
MDM1-210ENST00000540418 HDGFL1Q5TGJ6 251 aa19.29■□□□□ 0.68
MDM1-210ENST00000540418 NECTIN2Q92692 538 aa19.29■□□□□ 0.68
MDM1-210ENST00000540418 CHMP4AQ9BY43 222 aa19.29■□□□□ 0.68
MDM1-210ENST00000540418 COL15A1P39059 1388 aa19.29■□□□□ 0.68
MDM1-210ENST00000540418 CASZ1Q86V15 1759 aa19.29■□□□□ 0.68
MDM1-210ENST00000540418 EXOSC9Q06265 439 aaKnown RBP19.28■□□□□ 0.68
MDM1-210ENST00000540418 MTFR1LQ9H019 292 aa19.28■□□□□ 0.68
MDM1-210ENST00000540418 ZNF330Q9Y3S2 320 aaPredicted RBP19.28■□□□□ 0.68
MDM1-210ENST00000540418 LAMB4A4D0S4 1761 aa19.28■□□□□ 0.68
MDM1-210ENST00000540418 TWISTNBQ3B726 338 aaPredicted RBP19.28■□□□□ 0.68
MDM1-210ENST00000540418 PDIA6Q15084 440 aa19.27■□□□□ 0.68
MDM1-210ENST00000540418 TRMT2AQ8IZ69 625 aaKnown RBP19.27■□□□□ 0.68
MDM1-210ENST00000540418 ZPR1O75312 459 aa19.26■□□□□ 0.67
MDM1-210ENST00000540418 MYL6BP14649 208 aa19.26■□□□□ 0.67
MDM1-210ENST00000540418 NARFQ9UHQ1 456 aa19.26■□□□□ 0.67
MDM1-210ENST00000540418 SPON1Q9HCB6 807 aa19.26■□□□□ 0.67
MDM1-210ENST00000540418 DDX21Q9NR30 783 aaKnown RBP eCLIP19.26■□□□□ 0.67
MDM1-210ENST00000540418 ATF5Q9Y2D1 282 aaPredicted RBP19.26■□□□□ 0.67
MDM1-210ENST00000540418 ZBED9Q6R2W3 1325 aa19.26■□□□□ 0.67
MDM1-210ENST00000540418 USP42Q9H9J4 1324 aaKnown RBP19.26■□□□□ 0.67
MDM1-210ENST00000540418 DBF4Q9UBU7 674 aaPredicted RBP19.25■□□□□ 0.67
MDM1-210ENST00000540418 VAMP4O75379 141 aa19.25■□□□□ 0.67
MDM1-210ENST00000540418 CCDC30Q5VVM6 783 aa19.25■□□□□ 0.67
MDM1-210ENST00000540418 ARXQ96QS3 562 aa19.25■□□□□ 0.67
MDM1-210ENST00000540418 SRP68Q9UHB9 627 aaKnown RBP19.25■□□□□ 0.67
MDM1-210ENST00000540418 TBC1D2BQ9UPU7 963 aa19.25■□□□□ 0.67
MDM1-210ENST00000540418 CHPF2Q9P2E5 772 aa19.24■□□□□ 0.67
MDM1-210ENST00000540418 GYS1P13807 737 aa19.24■□□□□ 0.67
MDM1-210ENST00000540418 PROSER3Q2NL68 480 aa19.24■□□□□ 0.67
MDM1-210ENST00000540418 LRP10Q7Z4F1 713 aa19.24■□□□□ 0.67
MDM1-210ENST00000540418 DZIP3Q86Y13 1208 aaKnown RBP19.24■□□□□ 0.67
MDM1-210ENST00000540418 USPL1Q5W0Q7 1092 aa19.23■□□□□ 0.67
MDM1-210ENST00000540418 NLGN1Q8N2Q7 840 aa19.23■□□□□ 0.67
MDM1-210ENST00000540418 MSL1Q68DK7 614 aa19.23■□□□□ 0.67
MDM1-210ENST00000540418 ANXA1P04083 346 aa19.22■□□□□ 0.67
MDM1-210ENST00000540418 HYPKQ9NX55 129 aa19.22■□□□□ 0.67
MDM1-210ENST00000540418 CAMTA2O94983 1202 aa19.21■□□□□ 0.67
MDM1-210ENST00000540418 PTGER2P43116 358 aa19.21■□□□□ 0.67
MDM1-210ENST00000540418 C4AP0C0L4 1744 aa19.2■□□□□ 0.66
MDM1-210ENST00000540418 FKBP8Q14318 412 aa19.2■□□□□ 0.66
MDM1-210ENST00000540418 TTLL7Q6ZT98 887 aa19.2■□□□□ 0.66
MDM1-210ENST00000540418 SGIP1Q9BQI5 828 aa19.2■□□□□ 0.66
MDM1-210ENST00000540418 STK31Q9BXU1 1019 aa19.2■□□□□ 0.66
MDM1-210ENST00000540418 BCL2L12Q9HB09 334 aa19.2■□□□□ 0.66
MDM1-210ENST00000540418 POLD1P28340 1107 aa19.19■□□□□ 0.66
MDM1-210ENST00000540418 KIF6Q6ZMV9 814 aa19.19■□□□□ 0.66
MDM1-210ENST00000540418 COPS6Q7L5N1 327 aa19.19■□□□□ 0.66
MDM1-210ENST00000540418 XAGE3Q8WTP9 111 aa19.19■□□□□ 0.66
MDM1-210ENST00000540418 ERVV-1B6SEH8 477 aa19.18■□□□□ 0.66
MDM1-210ENST00000540418 RGL2O15211 777 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms