RNA–Protein interactions for RNA: ENST00000538758.1

RIMKLB-208, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 3

Gene RIMKLB, Length 570 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-208ENST00000538758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12□□□□□ -0.49
RIMKLB-208ENST00000538758 MSH5O43196 834 aa12□□□□□ -0.49
RIMKLB-208ENST00000538758 GIGYF1O75420 1035 aaPredicted RBP12□□□□□ -0.49
RIMKLB-208ENST00000538758 PHF14O94880 888 aa12□□□□□ -0.49
RIMKLB-208ENST00000538758 STARD3NLO95772 234 aa12□□□□□ -0.49
RIMKLB-208ENST00000538758 A1BGP04217 495 aa12□□□□□ -0.49
RIMKLB-208ENST00000538758 TRAPPC3LQ5T215 181 aa12□□□□□ -0.49
RIMKLB-208ENST00000538758 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
RIMKLB-208ENST00000538758 CCDC87Q9NVE4 849 aa12□□□□□ -0.49
RIMKLB-208ENST00000538758 ATF5Q9Y2D1 282 aaPredicted RBP12□□□□□ -0.49
RIMKLB-208ENST00000538758 CANXP27824 592 aaKnown RBP11.99□□□□□ -0.49
RIMKLB-208ENST00000538758 SSFA2P28290 1259 aa11.99□□□□□ -0.49
RIMKLB-208ENST00000538758 SLC16A10Q8TF71 515 aa11.99□□□□□ -0.49
RIMKLB-208ENST00000538758 ZBTB1Q9Y2K1 713 aa11.99□□□□□ -0.49
RIMKLB-208ENST00000538758 TJP1Q07157 1748 aa11.99□□□□□ -0.49
RIMKLB-208ENST00000538758 COL5A3P25940 1745 aaPredicted RBP11.98□□□□□ -0.49
RIMKLB-208ENST00000538758 GNAI1P63096 354 aa11.98□□□□□ -0.49
RIMKLB-208ENST00000538758 CALD1Q05682 793 aaKnown RBP11.98□□□□□ -0.49
RIMKLB-208ENST00000538758 MTFR1LQ9H019 292 aa11.98□□□□□ -0.49
RIMKLB-208ENST00000538758 SPON1Q9HCB6 807 aa11.98□□□□□ -0.49
RIMKLB-208ENST00000538758 MBIPQ9NS73 344 aa11.98□□□□□ -0.49
RIMKLB-208ENST00000538758 IFT57Q9NWB7 429 aa11.98□□□□□ -0.49
RIMKLB-208ENST00000538758 UBR3Q6ZT12 1888 aa11.97□□□□□ -0.49
RIMKLB-208ENST00000538758 TUBGCP6Q96RT7 1819 aa11.97□□□□□ -0.49
RIMKLB-208ENST00000538758 KRT24Q2M2I5 525 aa11.97□□□□□ -0.49
RIMKLB-208ENST00000538758 WDR63Q8IWG1 891 aa11.97□□□□□ -0.49
RIMKLB-208ENST00000538758 NGEFQ8N5V2 710 aa11.97□□□□□ -0.49
RIMKLB-208ENST00000538758 KDM3BQ7LBC6 1761 aa11.97□□□□□ -0.49
RIMKLB-208ENST00000538758 CASZ1Q86V15 1759 aa11.97□□□□□ -0.49
RIMKLB-208ENST00000538758 QSER1Q2KHR3 1735 aa11.97□□□□□ -0.49
RIMKLB-208ENST00000538758 SOS1Q07889 1333 aaPredicted RBP11.96□□□□□ -0.49
RIMKLB-208ENST00000538758 NBPF26B4DH59 902 aa11.96□□□□□ -0.49
RIMKLB-208ENST00000538758 RFC4P35249 363 aa11.96□□□□□ -0.49
RIMKLB-208ENST00000538758 PTGER2P43116 358 aa11.96□□□□□ -0.49
RIMKLB-208ENST00000538758 PIP4K2AP48426 406 aaPredicted RBP11.96□□□□□ -0.49
RIMKLB-208ENST00000538758 EIF5P55010 431 aaKnown RBP11.96□□□□□ -0.49
RIMKLB-208ENST00000538758 NBPF10Q6P3W6 841 aaKnown RBP11.96□□□□□ -0.49
RIMKLB-208ENST00000538758 NBPF15Q8N660 670 aa11.96□□□□□ -0.49
RIMKLB-208ENST00000538758 CICQ96RK0 1608 aaPredicted RBP11.96□□□□□ -0.5
RIMKLB-208ENST00000538758 IL6STP40189 918 aaPredicted RBP11.95□□□□□ -0.5
RIMKLB-208ENST00000538758 SGIP1Q9BQI5 828 aa11.95□□□□□ -0.5
RIMKLB-208ENST00000538758 SPINK5Q9NQ38 1064 aaPredicted RBP11.95□□□□□ -0.5
RIMKLB-208ENST00000538758 IL16Q14005 1332 aa11.94□□□□□ -0.5
RIMKLB-208ENST00000538758 EIF2S2P20042 333 aaKnown RBP11.94□□□□□ -0.5
RIMKLB-208ENST00000538758 DUSP27Q5VZP5 1158 aa11.94□□□□□ -0.5
RIMKLB-208ENST00000538758 MSL1Q68DK7 614 aa11.94□□□□□ -0.5
RIMKLB-208ENST00000538758 C8orf58Q8NAV2 365 aa11.94□□□□□ -0.5
RIMKLB-208ENST00000538758 TSR2Q969E8 191 aaKnown RBP11.94□□□□□ -0.5
RIMKLB-208ENST00000538758 FOXD4L1Q9NU39 408 aa11.94□□□□□ -0.5
RIMKLB-208ENST00000538758 SRP68Q9UHB9 627 aaKnown RBP11.94□□□□□ -0.5
RIMKLB-208ENST00000538758 ZNF521Q96K83 1311 aa11.93□□□□□ -0.5
RIMKLB-208ENST00000538758 ELL2O00472 640 aaPredicted RBP11.93□□□□□ -0.5
RIMKLB-208ENST00000538758 GYS1P13807 737 aa11.93□□□□□ -0.5
RIMKLB-208ENST00000538758 PDIA6Q15084 440 aa11.93□□□□□ -0.5
RIMKLB-208ENST00000538758 NARFQ9UHQ1 456 aa11.93□□□□□ -0.5
RIMKLB-208ENST00000538758 TBC1D2BQ9UPU7 963 aa11.93□□□□□ -0.5
RIMKLB-208ENST00000538758 A0A087WZG4 1122 aa11.92□□□□□ -0.5
RIMKLB-208ENST00000538758 ZPR1O75312 459 aa11.92□□□□□ -0.5
RIMKLB-208ENST00000538758 USPL1Q5W0Q7 1092 aa11.92□□□□□ -0.5
RIMKLB-208ENST00000538758 NLGN1Q8N2Q7 840 aa11.92□□□□□ -0.5
RIMKLB-208ENST00000538758 NECTIN2Q92692 538 aa11.92□□□□□ -0.5
RIMKLB-208ENST00000538758 BCL2L12Q9HB09 334 aa11.92□□□□□ -0.5
RIMKLB-208ENST00000538758 ZNF330Q9Y3S2 320 aaPredicted RBP11.92□□□□□ -0.5
RIMKLB-208ENST00000538758 COL15A1P39059 1388 aa11.92□□□□□ -0.5
RIMKLB-208ENST00000538758 USP42Q9H9J4 1324 aaKnown RBP11.91□□□□□ -0.5
RIMKLB-208ENST00000538758 HOXB7P09629 217 aa11.91□□□□□ -0.5
RIMKLB-208ENST00000538758 MYL6BP14649 208 aa11.91□□□□□ -0.5
RIMKLB-208ENST00000538758 POLD1P28340 1107 aa11.91□□□□□ -0.5
RIMKLB-208ENST00000538758 FKBP8Q14318 412 aa11.91□□□□□ -0.5
RIMKLB-208ENST00000538758 TSPYL6Q8N831 410 aa11.91□□□□□ -0.5
RIMKLB-208ENST00000538758 ARXQ96QS3 562 aa11.91□□□□□ -0.5
RIMKLB-208ENST00000538758 ANXA1P04083 346 aa11.9□□□□□ -0.5
RIMKLB-208ENST00000538758 TM4SF1P30408 202 aa11.9□□□□□ -0.5
RIMKLB-208ENST00000538758 GOLGA2Q08379 1002 aa11.9□□□□□ -0.5
RIMKLB-208ENST00000538758 PROSER3Q2NL68 480 aa11.9□□□□□ -0.5
RIMKLB-208ENST00000538758 LRP10Q7Z4F1 713 aa11.9□□□□□ -0.5
RIMKLB-208ENST00000538758 NPM2Q86SE8 214 aaKnown RBP11.9□□□□□ -0.5
RIMKLB-208ENST00000538758 ERBB4Q15303 1308 aa11.89□□□□□ -0.51
RIMKLB-208ENST00000538758 CAMTA2O94983 1202 aa11.89□□□□□ -0.51
RIMKLB-208ENST00000538758 HDGFL1Q5TGJ6 251 aa11.89□□□□□ -0.51
RIMKLB-208ENST00000538758 DZIP3Q86Y13 1208 aaKnown RBP11.89□□□□□ -0.51
RIMKLB-208ENST00000538758 PIAS4Q8N2W9 510 aaPredicted RBP11.89□□□□□ -0.51
RIMKLB-208ENST00000538758 PPP1R1BQ9UD71 204 aaPredicted RBP11.89□□□□□ -0.51
RIMKLB-208ENST00000538758 COL24A1Q17RW2 1714 aa11.89□□□□□ -0.51
RIMKLB-208ENST00000538758 FANCIQ9NVI1 1328 aa11.88□□□□□ -0.51
RIMKLB-208ENST00000538758 VAMP4O75379 141 aa11.88□□□□□ -0.51
RIMKLB-208ENST00000538758 MMP10P09238 476 aa11.88□□□□□ -0.51
RIMKLB-208ENST00000538758 EXOSC9Q06265 439 aaKnown RBP11.88□□□□□ -0.51
RIMKLB-208ENST00000538758 SLFN5Q08AF3 891 aa11.88□□□□□ -0.51
RIMKLB-208ENST00000538758 TTLL7Q6ZT98 887 aa11.88□□□□□ -0.51
RIMKLB-208ENST00000538758 CDCA7LQ96GN5 454 aa11.88□□□□□ -0.51
RIMKLB-208ENST00000538758 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
RIMKLB-208ENST00000538758 DDX21Q9NR30 783 aaKnown RBP eCLIP11.88□□□□□ -0.51
RIMKLB-208ENST00000538758 LRP5O75197 1615 aa11.87□□□□□ -0.51
RIMKLB-208ENST00000538758 C4AP0C0L4 1744 aa11.87□□□□□ -0.51
RIMKLB-208ENST00000538758 NFIXQ14938 502 aa11.87□□□□□ -0.51
RIMKLB-208ENST00000538758 HLFQ16534 295 aa11.87□□□□□ -0.51
RIMKLB-208ENST00000538758 TWISTNBQ3B726 338 aaPredicted RBP11.87□□□□□ -0.51
RIMKLB-208ENST00000538758 COPS6Q7L5N1 327 aa11.87□□□□□ -0.51
RIMKLB-208ENST00000538758 CHPF2Q9P2E5 772 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms