RNA–Protein interactions for RNA: ENST00000538258.1

PGA3-204, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

TSL 2 BASIC

Gene PGA3, Length 867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-204ENST00000538258 AMIGO3Q86WK7 504 aa11.89□□□□□ -0.51
PGA3-204ENST00000538258 FAM9BQ8IZU0 186 aa11.89□□□□□ -0.51
PGA3-204ENST00000538258 TEX13AQ9BXU3 409 aaPredicted RBP11.89□□□□□ -0.51
PGA3-204ENST00000538258 CCDC87Q9NVE4 849 aa11.89□□□□□ -0.51
PGA3-204ENST00000538258 STARD3NLO95772 234 aa11.88□□□□□ -0.51
PGA3-204ENST00000538258 TRAPPC3LQ5T215 181 aa11.88□□□□□ -0.51
PGA3-204ENST00000538258 INTS5Q6P9B9 1019 aaKnown RBP11.88□□□□□ -0.51
PGA3-204ENST00000538258 TSPYL4Q9UJ04 414 aa11.88□□□□□ -0.51
PGA3-204ENST00000538258 SNRPA1P09661 255 aaKnown RBP11.87□□□□□ -0.51
PGA3-204ENST00000538258 ADRA2BP18089 450 aa11.87□□□□□ -0.51
PGA3-204ENST00000538258 LAS1LQ9Y4W2 734 aaKnown RBP11.87□□□□□ -0.51
PGA3-204ENST00000538258 CCER2I3L3R5 266 aa11.86□□□□□ -0.51
PGA3-204ENST00000538258 MSL1Q68DK7 614 aa11.86□□□□□ -0.51
PGA3-204ENST00000538258 ARHGEF1Q92888 912 aaKnown RBP11.86□□□□□ -0.51
PGA3-204ENST00000538258 BABAM1Q9NWV8 329 aa11.86□□□□□ -0.51
PGA3-204ENST00000538258 ZBTB1Q9Y2K1 713 aa11.86□□□□□ -0.51
PGA3-204ENST00000538258 C4AP0C0L4 1744 aa11.86□□□□□ -0.51
PGA3-204ENST00000538258 COL24A1Q17RW2 1714 aa11.86□□□□□ -0.51
PGA3-204ENST00000538258 PRAMEF22A3QJZ6 481 aa11.85□□□□□ -0.51
PGA3-204ENST00000538258 CENPBP07199 599 aaPredicted RBP11.85□□□□□ -0.51
PGA3-204ENST00000538258 CANXP27824 592 aaKnown RBP11.85□□□□□ -0.51
PGA3-204ENST00000538258 POLD1P28340 1107 aa11.85□□□□□ -0.51
PGA3-204ENST00000538258 RFC4P35249 363 aa11.85□□□□□ -0.51
PGA3-204ENST00000538258 PTGER2P43116 358 aa11.85□□□□□ -0.51
PGA3-204ENST00000538258 EIF4A1P60842 406 aaKnown RBP11.85□□□□□ -0.51
PGA3-204ENST00000538258 CALD1Q05682 793 aaKnown RBP11.85□□□□□ -0.51
PGA3-204ENST00000538258 USP16Q9Y5T5 823 aa11.85□□□□□ -0.51
PGA3-204ENST00000538258 SOS1Q07889 1333 aaPredicted RBP11.85□□□□□ -0.51
PGA3-204ENST00000538258 LAMB4A4D0S4 1761 aa11.84□□□□□ -0.51
PGA3-204ENST00000538258 CHL1O00533 1208 aa11.84□□□□□ -0.51
PGA3-204ENST00000538258 A1BGP04217 495 aa11.84□□□□□ -0.51
PGA3-204ENST00000538258 SGIP1Q9BQI5 828 aa11.84□□□□□ -0.51
PGA3-204ENST00000538258 COL15A1P39059 1388 aa11.83□□□□□ -0.52
PGA3-204ENST00000538258 GIGYF1O75420 1035 aaPredicted RBP11.83□□□□□ -0.52
PGA3-204ENST00000538258 ARXQ96QS3 562 aa11.83□□□□□ -0.52
PGA3-204ENST00000538258 ZNF330Q9Y3S2 320 aaPredicted RBP11.83□□□□□ -0.52
PGA3-204ENST00000538258 A0A087WZG4 1122 aa11.82□□□□□ -0.52
PGA3-204ENST00000538258 ZPR1O75312 459 aa11.82□□□□□ -0.52
PGA3-204ENST00000538258 GNAI1P63096 354 aa11.82□□□□□ -0.52
PGA3-204ENST00000538258 CCDC27Q2M243 656 aa11.82□□□□□ -0.52
PGA3-204ENST00000538258 NPM2Q86SE8 214 aaKnown RBP11.82□□□□□ -0.52
PGA3-204ENST00000538258 MIER1Q8N108 512 aa11.82□□□□□ -0.52
PGA3-204ENST00000538258 CFAP44Q96MT7 982 aa11.82□□□□□ -0.52
PGA3-204ENST00000538258 SYT17Q9BSW7 474 aa11.82□□□□□ -0.52
PGA3-204ENST00000538258 IFT57Q9NWB7 429 aa11.82□□□□□ -0.52
PGA3-204ENST00000538258 SRP68Q9UHB9 627 aaKnown RBP11.82□□□□□ -0.52
PGA3-204ENST00000538258 SALL2Q9Y467 1007 aaPredicted RBP11.82□□□□□ -0.52
PGA3-204ENST00000538258 USP42Q9H9J4 1324 aaKnown RBP11.82□□□□□ -0.52
PGA3-204ENST00000538258 ZNF853P0CG23 659 aa11.81□□□□□ -0.52
PGA3-204ENST00000538258 GYS1P13807 737 aa11.81□□□□□ -0.52
PGA3-204ENST00000538258 IL6STP40189 918 aaPredicted RBP11.81□□□□□ -0.52
PGA3-204ENST00000538258 PIP4K2AP48426 406 aaPredicted RBP11.81□□□□□ -0.52
PGA3-204ENST00000538258 EIF5P55010 431 aaKnown RBP11.81□□□□□ -0.52
PGA3-204ENST00000538258 NCBP3Q53F19 620 aaKnown RBP11.81□□□□□ -0.52
PGA3-204ENST00000538258 WWC1Q8IX03 1113 aa11.81□□□□□ -0.52
PGA3-204ENST00000538258 NLGN1Q8N2Q7 840 aa11.81□□□□□ -0.52
PGA3-204ENST00000538258 FHDC1Q9C0D6 1143 aaPredicted RBP11.81□□□□□ -0.52
PGA3-204ENST00000538258 USPL1Q5W0Q7 1092 aa11.8□□□□□ -0.52
PGA3-204ENST00000538258 KLHL34Q8N239 644 aa11.8□□□□□ -0.52
PGA3-204ENST00000538258 MBIPQ9NS73 344 aa11.8□□□□□ -0.52
PGA3-204ENST00000538258 NARFQ9UHQ1 456 aa11.8□□□□□ -0.52
PGA3-204ENST00000538258 NBPF26B4DH59 902 aa11.79□□□□□ -0.52
PGA3-204ENST00000538258 MMP10P09238 476 aa11.79□□□□□ -0.52
PGA3-204ENST00000538258 EIF2S2P20042 333 aaKnown RBP11.79□□□□□ -0.52
PGA3-204ENST00000538258 KRT24Q2M2I5 525 aa11.79□□□□□ -0.52
PGA3-204ENST00000538258 NBPF10Q6P3W6 841 aaKnown RBP11.79□□□□□ -0.52
PGA3-204ENST00000538258 NGEFQ8N5V2 710 aa11.79□□□□□ -0.52
PGA3-204ENST00000538258 NBPF15Q8N660 670 aa11.79□□□□□ -0.52
PGA3-204ENST00000538258 TBC1D2BQ9UPU7 963 aa11.79□□□□□ -0.52
PGA3-204ENST00000538258 FKBP8Q14318 412 aa11.78□□□□□ -0.52
PGA3-204ENST00000538258 DZIP3Q86Y13 1208 aaKnown RBP11.78□□□□□ -0.52
PGA3-204ENST00000538258 IL16Q14005 1332 aa11.78□□□□□ -0.52
PGA3-204ENST00000538258 MYL6BP14649 208 aa11.77□□□□□ -0.53
PGA3-204ENST00000538258 WDR63Q8IWG1 891 aa11.77□□□□□ -0.53
PGA3-204ENST00000538258 NECTIN2Q92692 538 aa11.77□□□□□ -0.53
PGA3-204ENST00000538258 PARP3Q9Y6F1 533 aa11.77□□□□□ -0.53
PGA3-204ENST00000538258 ERBB4Q15303 1308 aa11.77□□□□□ -0.53
PGA3-204ENST00000538258 SCN7AQ01118 1682 aa11.77□□□□□ -0.53
PGA3-204ENST00000538258 HOXB7P09629 217 aa11.76□□□□□ -0.53
PGA3-204ENST00000538258 DUSP27Q5VZP5 1158 aa11.76□□□□□ -0.53
PGA3-204ENST00000538258 TSR2Q969E8 191 aaKnown RBP11.76□□□□□ -0.53
PGA3-204ENST00000538258 BCL2L12Q9HB09 334 aa11.76□□□□□ -0.53
PGA3-204ENST00000538258 BCORQ6W2J9 1755 aa11.76□□□□□ -0.53
PGA3-204ENST00000538258 ELL2O00472 640 aaPredicted RBP11.75□□□□□ -0.53
PGA3-204ENST00000538258 CAMTA2O94983 1202 aa11.75□□□□□ -0.53
PGA3-204ENST00000538258 GPR162Q16538 588 aa11.75□□□□□ -0.53
PGA3-204ENST00000538258 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
PGA3-204ENST00000538258 TM4SF1P30408 202 aa11.74□□□□□ -0.53
PGA3-204ENST00000538258 DDR1Q08345 913 aa11.74□□□□□ -0.53
PGA3-204ENST00000538258 NFIXQ14938 502 aa11.74□□□□□ -0.53
PGA3-204ENST00000538258 KIF6Q6ZMV9 814 aa11.74□□□□□ -0.53
PGA3-204ENST00000538258 BICDL1Q6ZP65 573 aa11.74□□□□□ -0.53
PGA3-204ENST00000538258 C8orf58Q8NAV2 365 aa11.74□□□□□ -0.53
PGA3-204ENST00000538258 POLRMTO00411 1230 aaKnown RBP11.73□□□□□ -0.53
PGA3-204ENST00000538258 ANXA1P04083 346 aa11.73□□□□□ -0.53
PGA3-204ENST00000538258 NUP98P52948 1817 aa11.73□□□□□ -0.53
PGA3-204ENST00000538258 AFDNP55196 1824 aaKnown RBP11.73□□□□□ -0.53
PGA3-204ENST00000538258 PDIA6Q15084 440 aa11.73□□□□□ -0.53
PGA3-204ENST00000538258 PROSER3Q2NL68 480 aa11.73□□□□□ -0.53
PGA3-204ENST00000538258 TBC1D9BQ66K14 1250 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms